==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-MAR-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-JAN-10 2KT8 . COMPND 2 MOLECULE: PROBABLE SURFACE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM PERFRINGENS; . AUTHOR Y.YANG,T.A.RAMELOT,D.LEE,C.CICCOSANTI,K.HAMILTON,T.B.ACTON, . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5720.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 43 56.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 31 40.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 115 0, 0.0 2,-0.1 0, 0.0 65,-0.0 0.000 360.0 360.0 360.0 103.8 9.4 8.3 10.8 2 2 A E - 0 0 80 34,-0.0 2,-0.4 1,-0.0 65,-0.2 -0.373 360.0-152.1 -70.8 151.2 7.6 7.7 7.6 3 3 A K E -A 37 0A 96 34,-1.6 34,-2.9 63,-0.1 2,-0.5 -0.960 3.2-149.6-127.0 144.2 8.4 4.6 5.5 4 4 A T E -AB 36 65A 6 61,-1.0 61,-1.8 -2,-0.4 2,-0.4 -0.947 10.0-160.9-117.6 121.9 8.2 4.0 1.8 5 5 A G E -A 35 0A 0 30,-1.8 30,-1.3 -2,-0.5 2,-0.6 -0.823 17.5-129.1-102.0 137.6 7.4 0.5 0.4 6 6 A I E -AB 34 62A 48 56,-1.5 56,-2.0 57,-0.5 2,-0.3 -0.721 23.3-131.0 -87.1 123.2 8.2 -0.4 -3.3 7 7 A V E - B 0 61A 0 26,-1.4 25,-1.8 -2,-0.6 2,-0.5 -0.534 22.0-169.6 -74.4 134.1 5.2 -2.0 -5.0 8 8 A N + 0 0 80 52,-1.7 2,-0.3 -2,-0.3 4,-0.1 -0.876 23.7 141.1-128.5 101.3 6.0 -5.3 -6.9 9 9 A V - 0 0 35 -2,-0.5 4,-0.1 2,-0.1 22,-0.0 -0.935 54.7-128.6-136.7 160.6 3.2 -6.6 -9.1 10 10 A S S S- 0 0 129 -2,-0.3 3,-0.1 2,-0.2 -1,-0.1 0.601 104.7 -8.6 -84.2 -10.4 3.1 -8.3 -12.6 11 11 A S S S- 0 0 93 1,-0.3 20,-0.5 19,-0.0 2,-0.3 0.326 122.8 -29.3-147.4 -66.8 0.5 -5.8 -13.7 12 12 A S - 0 0 53 18,-0.1 2,-0.5 -4,-0.1 -1,-0.3 -0.983 51.0-115.5-157.5 165.7 -1.0 -3.4 -11.1 13 13 A L E -C 29 0A 5 16,-2.3 16,-2.7 -2,-0.3 2,-0.2 -0.925 24.1-139.8-113.4 130.2 -1.7 -3.3 -7.3 14 14 A N E -C 28 0A 73 -2,-0.5 2,-0.5 14,-0.2 14,-0.2 -0.607 12.9-142.6 -85.8 145.8 -5.3 -2.9 -6.0 15 15 A V E -C 27 0A 0 12,-2.0 11,-1.8 -2,-0.2 12,-0.8 -0.916 12.8-161.0-111.5 131.0 -6.0 -0.6 -3.0 16 16 A R E -CD 25 55A 39 39,-1.9 39,-2.6 -2,-0.5 9,-0.2 -0.851 18.2-152.5-111.1 146.4 -8.5 -1.6 -0.3 17 17 A E S S+ 0 0 91 7,-2.0 -1,-0.1 -2,-0.4 36,-0.1 0.659 88.7 45.4 -88.2 -16.6 -10.2 0.7 2.2 18 18 A G S S- 0 0 26 6,-0.3 -2,-0.1 37,-0.1 3,-0.0 0.334 92.0-114.7 -96.7-130.9 -10.6 -2.1 4.7 19 19 A A S S+ 0 0 44 36,-0.0 24,-0.1 27,-0.0 2,-0.0 0.311 76.3 100.9-152.2 -5.6 -8.0 -4.7 5.6 20 20 A S S > S- 0 0 52 1,-0.1 3,-0.8 37,-0.0 4,-0.2 -0.289 85.8-103.9 -82.4 172.3 -9.4 -8.0 4.3 21 21 A T T 3 S+ 0 0 100 1,-0.3 -1,-0.1 2,-0.1 36,-0.1 0.838 119.7 17.4 -66.1 -31.2 -8.4 -9.8 1.1 22 22 A S T 3 S+ 0 0 100 1,-0.0 -1,-0.3 2,-0.0 3,-0.1 -0.379 86.1 128.6-138.4 58.7 -11.6 -8.6 -0.6 23 23 A S S < S- 0 0 56 -3,-0.8 2,-0.3 1,-0.1 -2,-0.1 0.957 80.4 -39.7 -77.7 -79.1 -13.0 -5.7 1.5 24 24 A K - 0 0 134 -4,-0.2 -7,-2.0 -3,-0.0 2,-0.4 -0.822 50.6-144.6-157.0 113.0 -13.6 -2.8 -0.8 25 25 A V E +C 16 0A 80 -2,-0.3 -9,-0.2 -9,-0.2 3,-0.1 -0.637 19.0 174.3 -80.7 129.4 -11.4 -1.7 -3.8 26 26 A I E - 0 0 54 -11,-1.8 2,-0.3 -2,-0.4 -1,-0.1 0.447 64.2 -50.9-111.2 -5.6 -11.4 2.1 -4.3 27 27 A G E -C 15 0A 26 -12,-0.8 -12,-2.0 2,-0.0 2,-0.3 -0.990 58.0-100.4 164.9-158.0 -8.7 2.2 -7.1 28 28 A S E -C 14 0A 69 -2,-0.3 2,-0.3 -14,-0.2 -14,-0.2 -0.980 16.6-135.6-153.9 164.7 -5.3 0.8 -8.0 29 29 A L E -C 13 0A 42 -16,-2.7 -16,-2.3 -2,-0.3 3,-0.1 -0.924 28.4-105.7-126.6 151.6 -1.6 2.0 -8.1 30 30 A S > - 0 0 85 -2,-0.3 3,-1.1 -18,-0.2 -18,-0.1 -0.271 47.0 -89.5 -71.2 160.7 1.1 1.4 -10.8 31 31 A G T 3 S+ 0 0 21 -20,-0.5 -23,-0.2 1,-0.2 -1,-0.1 -0.233 111.4 20.6 -67.5 160.2 3.9 -1.1 -10.2 32 32 A N T 3 S+ 0 0 121 -25,-1.8 -1,-0.2 1,-0.2 2,-0.2 0.578 92.1 148.9 57.9 4.1 7.2 0.0 -8.6 33 33 A T < - 0 0 44 -3,-1.1 -26,-1.4 -27,-0.1 2,-0.3 -0.466 47.6-125.7 -70.4 135.9 5.0 2.9 -7.2 34 34 A K E -A 6 0A 91 -2,-0.2 2,-0.4 -28,-0.2 -28,-0.2 -0.614 23.2-162.9 -83.6 140.6 6.1 4.1 -3.8 35 35 A V E -A 5 0A 9 -30,-1.3 -30,-1.8 -2,-0.3 2,-0.4 -0.980 16.7-129.3-126.7 130.9 3.5 4.2 -1.0 36 36 A T E -A 4 0A 59 -2,-0.4 12,-1.4 12,-0.2 2,-0.5 -0.629 22.5-159.3 -79.8 129.3 3.9 6.2 2.3 37 37 A I E +AE 3 47A 11 -34,-2.9 -34,-1.6 -2,-0.4 10,-0.2 -0.923 21.2 173.7-112.2 129.4 3.3 4.1 5.4 38 38 A V E S- 0 0 72 8,-1.1 2,-0.3 -2,-0.5 9,-0.1 0.407 71.6 -16.8-110.2 -2.5 2.3 5.8 8.7 39 39 A G E - E 0 46A 32 7,-0.9 7,-1.5 -36,-0.1 2,-0.3 -0.988 62.6-114.6 179.0 177.9 1.6 2.5 10.6 40 40 A E E - E 0 45A 97 -2,-0.3 2,-0.3 5,-0.2 5,-0.2 -0.945 18.7-176.7-133.1 155.4 0.9 -1.3 10.3 41 41 A E E > - E 0 44A 131 3,-2.1 3,-1.5 -2,-0.3 -2,-0.0 -0.850 56.5 -43.3-156.3 115.8 -2.1 -3.4 11.1 42 42 A G T 3 S- 0 0 55 -2,-0.3 -1,-0.2 1,-0.2 -23,-0.0 -0.325 115.7 -27.4 63.7-142.9 -2.4 -7.2 10.8 43 43 A A T 3 S+ 0 0 51 -24,-0.1 15,-1.7 -3,-0.1 2,-0.3 0.163 127.8 77.3 -91.0 20.2 -0.9 -8.7 7.6 44 44 A F E < S-EF 41 57A 38 -3,-1.5 -3,-2.1 13,-0.2 2,-0.4 -0.949 74.8-131.0-130.2 150.8 -1.6 -5.4 5.8 45 45 A Y E -EF 40 56A 57 11,-3.0 11,-1.6 -2,-0.3 2,-0.5 -0.812 18.3-131.2-102.9 140.6 0.2 -2.1 5.8 46 46 A K E -EF 39 55A 63 -7,-1.5 -8,-1.1 -2,-0.4 -7,-0.9 -0.753 30.2-179.8 -91.2 130.4 -1.7 1.3 6.3 47 47 A I E -EF 37 54A 6 7,-2.6 7,-1.8 -2,-0.5 2,-1.2 -0.909 37.2-104.3-128.7 157.1 -0.8 4.0 3.8 48 48 A E E - F 0 53A 128 -12,-1.4 2,-0.2 -2,-0.3 -12,-0.2 -0.641 42.6-166.3 -82.1 97.3 -2.0 7.6 3.3 49 49 A Y E > - F 0 52A 72 -2,-1.2 3,-1.3 3,-1.0 2,-1.0 -0.598 33.0-100.7 -85.2 144.8 -4.4 7.3 0.3 50 50 A K T 3 S+ 0 0 191 1,-0.3 -1,-0.1 -2,-0.2 3,-0.1 -0.473 113.5 10.1 -66.8 100.6 -5.5 10.5 -1.5 51 51 A G T 3 S- 0 0 86 -2,-1.0 -1,-0.3 1,-0.2 2,-0.2 0.045 139.6 -6.3 116.9 -23.4 -8.9 11.0 0.0 52 52 A S E < S- F 0 49A 48 -3,-1.3 -3,-1.0 0, 0.0 2,-0.5 -0.864 94.8 -53.5-169.1-156.1 -8.7 8.4 2.8 53 53 A H E - F 0 48A 85 -2,-0.2 2,-0.3 -5,-0.2 -5,-0.2 -0.902 45.8-152.4-108.5 122.8 -6.5 5.6 4.2 54 54 A G E - F 0 47A 0 -7,-1.8 -7,-2.6 -2,-0.5 2,-0.4 -0.658 5.1-156.7 -92.4 148.8 -5.4 2.8 1.8 55 55 A Y E +DF 16 46A 44 -39,-2.6 -39,-1.9 -2,-0.3 2,-0.3 -0.983 15.1 172.3-127.2 132.3 -4.7 -0.8 2.9 56 56 A V E - F 0 45A 1 -11,-1.6 -11,-3.0 -2,-0.4 2,-0.1 -0.971 34.2-103.7-138.2 153.5 -2.5 -3.3 1.1 57 57 A A E > - F 0 44A 17 -2,-0.3 3,-0.9 -13,-0.3 -13,-0.2 -0.398 26.4-123.9 -74.1 151.2 -1.0 -6.8 1.9 58 58 A K G > S+ 0 0 114 -15,-1.7 3,-1.1 1,-0.2 -1,-0.1 0.735 106.0 72.5 -67.3 -20.3 2.7 -7.1 2.8 59 59 A E G 3 S+ 0 0 155 -16,-0.3 -1,-0.2 1,-0.3 -15,-0.1 0.863 97.6 46.5 -65.4 -32.9 3.1 -9.6 -0.1 60 60 A Y G < S+ 0 0 86 -3,-0.9 -52,-1.7 -53,-0.1 2,-0.5 0.466 101.8 83.3 -87.9 1.5 2.8 -6.7 -2.6 61 61 A I E < +B 7 0A 16 -3,-1.1 2,-0.3 -4,-0.2 -54,-0.2 -0.900 56.4 165.4-108.5 127.3 5.3 -4.7 -0.6 62 62 A K E +B 6 0A 104 -56,-2.0 -56,-1.5 -2,-0.5 -3,-0.0 -0.987 52.7 17.1-140.6 150.4 9.0 -5.2 -1.0 63 63 A D E - 0 0 97 -2,-0.3 2,-0.7 1,-0.2 -57,-0.5 0.989 69.8-163.7 54.4 72.3 12.2 -3.4 -0.1 64 64 A I E + 0 0 63 -59,-0.2 2,-0.3 -3,-0.1 -59,-0.2 -0.762 23.0 152.6 -90.5 115.1 10.8 -1.0 2.6 65 65 A K E -B 4 0A 136 -61,-1.8 -61,-1.0 -2,-0.7 2,-0.1 -0.992 47.8 -99.3-142.2 149.8 13.3 1.8 3.3 66 66 A D + 0 0 101 -2,-0.3 -63,-0.1 -63,-0.2 3,-0.0 -0.393 46.2 156.5 -67.4 141.8 13.0 5.4 4.5 67 67 A E + 0 0 92 -65,-0.2 -64,-0.1 -2,-0.1 -1,-0.1 -0.376 12.0 145.0-166.8 76.8 13.1 8.1 1.7 68 68 A V - 0 0 112 -66,-0.1 -65,-0.0 -64,-0.0 -2,-0.0 0.543 55.8-131.0 -94.9 -7.9 11.4 11.4 2.5 69 69 A L - 0 0 109 2,-0.0 -2,-0.1 -3,-0.0 4,-0.1 0.756 25.3 -93.1 60.3 120.2 14.1 13.4 0.5 70 70 A E - 0 0 176 1,-0.1 0, 0.0 2,-0.1 0, 0.0 -0.241 47.3-103.1 -61.1 148.5 15.7 16.4 2.2 71 71 A H S S+ 0 0 179 1,-0.1 -1,-0.1 2,-0.1 -2,-0.0 -0.108 95.8 42.5 -66.9 170.9 14.0 19.7 1.5 72 72 A H - 0 0 91 1,-0.1 -1,-0.1 3,-0.0 -2,-0.1 0.976 62.8-168.6 53.3 81.0 15.5 22.3 -0.9 73 73 A H + 0 0 157 2,-0.1 2,-0.1 -4,-0.1 -1,-0.1 0.891 61.2 94.9 -67.1 -38.2 16.5 20.1 -3.8 74 74 A H S S- 0 0 132 1,-0.1 2,-0.4 2,-0.0 0, 0.0 -0.344 79.0-132.5 -57.9 123.3 18.5 22.9 -5.4 75 75 A H 0 0 161 -2,-0.1 -1,-0.1 1,-0.1 -2,-0.1 -0.639 360.0 360.0 -81.8 130.0 22.1 22.5 -4.3 76 76 A H 0 0 198 -2,-0.4 -1,-0.1 0, 0.0 -2,-0.0 -0.323 360.0 360.0 -52.4 360.0 23.7 25.8 -3.0