==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 21-JAN-02 1KU3 . COMPND 2 MOLECULE: SIGMA FACTOR SIGA; . SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS AQUATICUS; . AUTHOR E.A.CAMPBELL,O.MUZZIN,M.CHLENOV,J.L.SUN,C.A.OLSON,O.WEINMAN, . 61 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4425.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 67.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 31 50.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 368 A E 0 0 126 0, 0.0 2,-0.8 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -26.1 11.4 24.0 3.9 2 369 A L - 0 0 93 4,-0.1 2,-0.1 3,-0.1 3,-0.1 -0.280 360.0 -49.8 53.0 -95.3 14.3 25.3 1.8 3 370 A E S S+ 0 0 44 -2,-0.8 3,-0.3 3,-0.1 0, 0.0 -0.318 82.5 112.2-140.5-136.6 17.3 24.1 3.8 4 371 A K S S+ 0 0 88 1,-0.3 -1,-0.1 -2,-0.1 -2,-0.1 0.611 120.7 15.5 63.5 10.9 18.7 24.1 7.4 5 372 A A S > S+ 0 0 17 -3,-0.1 4,-0.7 4,-0.1 -1,-0.3 -0.003 126.9 54.1-172.8 -47.5 18.1 20.4 7.2 6 373 A L T 4 S+ 0 0 65 -3,-0.3 -3,-0.1 -5,-0.2 8,-0.1 0.639 105.7 61.9 -73.4 -14.3 17.7 19.9 3.4 7 374 A S T 4 S+ 0 0 84 1,-0.2 -1,-0.2 7,-0.0 -4,-0.1 0.818 98.7 51.8 -78.4 -34.2 21.0 21.7 3.5 8 375 A K T 4 S+ 0 0 127 -3,-0.3 -2,-0.2 47,-0.1 -1,-0.2 0.664 91.7 98.2 -76.4 -16.2 22.6 18.8 5.5 9 376 A L S < S- 0 0 9 -4,-0.7 -4,-0.1 1,-0.1 43,-0.0 -0.485 77.2-124.8 -72.9 141.3 21.3 16.4 2.9 10 377 A S > - 0 0 49 -2,-0.2 4,-2.3 1,-0.1 5,-0.2 -0.152 28.1-100.7 -74.9 178.9 23.8 15.3 0.3 11 378 A E H > S+ 0 0 159 2,-0.2 4,-1.8 1,-0.2 5,-0.2 0.900 124.2 47.1 -70.2 -41.2 23.2 15.8 -3.4 12 379 A R H > S+ 0 0 170 2,-0.2 4,-2.8 1,-0.2 5,-0.2 0.933 113.9 48.5 -65.1 -44.5 22.2 12.1 -3.8 13 380 A E H > S+ 0 0 9 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.934 111.8 47.1 -61.7 -48.5 19.9 12.2 -0.8 14 381 A A H X S+ 0 0 21 -4,-2.3 4,-2.4 1,-0.2 -1,-0.2 0.881 115.7 46.8 -62.0 -37.5 18.1 15.4 -1.8 15 382 A M H X S+ 0 0 77 -4,-1.8 4,-2.3 -5,-0.2 5,-0.3 0.915 112.3 48.2 -71.9 -43.0 17.6 14.1 -5.3 16 383 A V H X S+ 0 0 3 -4,-2.8 4,-2.7 -5,-0.2 5,-0.2 0.925 114.2 48.3 -63.0 -42.9 16.5 10.6 -4.2 17 384 A L H X S+ 0 0 14 -4,-2.8 4,-3.1 -5,-0.2 6,-0.3 0.953 111.5 47.9 -62.5 -50.8 14.0 12.2 -1.8 18 385 A K H X>S+ 0 0 94 -4,-2.4 5,-1.7 2,-0.2 6,-1.1 0.900 115.3 44.7 -59.2 -43.1 12.6 14.7 -4.3 19 386 A M H ><5S+ 0 0 2 -4,-2.3 3,-0.9 4,-0.2 10,-0.7 0.959 116.2 47.0 -66.6 -47.2 12.1 12.1 -6.9 20 387 A R H 3<5S+ 0 0 46 -4,-2.7 9,-0.7 -5,-0.3 -2,-0.2 0.905 116.7 43.2 -59.2 -43.2 10.6 9.6 -4.4 21 388 A K H 3<5S- 0 0 81 -4,-3.1 -1,-0.2 -5,-0.2 7,-0.2 0.392 113.9-108.0 -87.9 1.6 8.2 12.2 -2.8 22 389 A G T - 0 0 62 -2,-0.4 4,-2.2 1,-0.1 5,-0.2 -0.287 30.8-107.5 -74.9 165.7 8.6 3.7 -6.5 31 398 A L H > S+ 0 0 16 1,-0.2 4,-2.4 2,-0.2 5,-0.1 0.864 123.1 51.8 -61.4 -35.0 11.9 2.5 -5.1 32 399 A E H > S+ 0 0 104 2,-0.2 4,-2.8 1,-0.2 5,-0.2 0.894 107.0 51.0 -69.8 -40.1 12.3 0.5 -8.3 33 400 A E H > S+ 0 0 79 1,-0.2 4,-1.7 2,-0.2 -2,-0.2 0.916 114.4 44.3 -63.4 -42.3 11.6 3.5 -10.6 34 401 A V H X S+ 0 0 0 -4,-2.2 4,-1.9 2,-0.2 5,-0.2 0.889 112.6 51.2 -70.7 -38.5 14.2 5.5 -8.8 35 402 A G H X>S+ 0 0 1 -4,-2.4 5,-2.7 -5,-0.2 4,-1.7 0.946 113.7 43.8 -63.6 -46.1 16.7 2.6 -8.7 36 403 A A H <5S+ 0 0 84 -4,-2.8 -1,-0.2 3,-0.2 -2,-0.2 0.840 108.5 61.4 -66.9 -30.4 16.3 2.1 -12.5 37 404 A Y H <5S+ 0 0 143 -4,-1.7 -1,-0.2 -5,-0.2 -2,-0.2 0.936 119.8 23.5 -59.8 -50.0 16.5 5.9 -13.0 38 405 A F H <5S- 0 0 79 -4,-1.9 -1,-0.2 2,-0.1 -2,-0.2 0.513 113.4-111.0 -95.5 -8.4 20.0 6.2 -11.5 39 406 A G T <5S+ 0 0 63 -4,-1.7 2,-0.3 1,-0.3 -3,-0.2 0.923 75.6 117.3 79.2 46.2 21.0 2.6 -12.2 40 407 A V < - 0 0 59 -5,-2.7 -1,-0.3 -6,-0.2 -2,-0.1 -0.895 67.2 -80.3-137.8 166.6 21.2 1.2 -8.7 41 408 A T > - 0 0 82 -2,-0.3 4,-1.7 1,-0.1 5,-0.2 -0.239 32.4-118.9 -70.2 158.8 19.4 -1.4 -6.7 42 409 A R H > S+ 0 0 84 1,-0.2 4,-1.8 2,-0.2 5,-0.1 0.927 117.1 52.1 -58.1 -45.7 16.0 -1.0 -5.0 43 410 A E H > S+ 0 0 95 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.828 103.9 55.3 -61.8 -37.5 17.7 -1.6 -1.7 44 411 A R H > S+ 0 0 87 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.899 108.7 48.7 -64.4 -39.5 20.4 1.0 -2.2 45 412 A I H X S+ 0 0 2 -4,-1.7 4,-2.6 2,-0.2 -2,-0.2 0.888 109.2 52.4 -67.3 -38.9 17.7 3.7 -2.8 46 413 A R H X S+ 0 0 97 -4,-1.8 4,-2.7 1,-0.2 -2,-0.2 0.911 109.6 50.6 -62.8 -40.5 15.9 2.6 0.3 47 414 A Q H X S+ 0 0 118 -4,-2.2 4,-1.7 2,-0.2 -2,-0.2 0.905 111.3 46.6 -63.8 -44.4 19.1 3.0 2.2 48 415 A I H X S+ 0 0 16 -4,-2.2 4,-2.1 2,-0.2 -2,-0.2 0.903 114.3 48.6 -66.5 -39.4 19.7 6.5 0.9 49 416 A E H X S+ 0 0 9 -4,-2.6 4,-2.6 2,-0.2 -2,-0.2 0.921 110.2 50.0 -66.9 -44.2 16.1 7.5 1.6 50 417 A N H X S+ 0 0 62 -4,-2.7 4,-1.9 1,-0.2 -1,-0.2 0.876 112.5 48.2 -62.8 -36.6 16.1 6.2 5.1 51 418 A K H X S+ 0 0 105 -4,-1.7 4,-2.1 2,-0.2 -1,-0.2 0.885 110.7 50.4 -70.9 -39.9 19.3 8.0 5.9 52 419 A A H X S+ 0 0 0 -4,-2.1 4,-1.8 1,-0.2 -2,-0.2 0.924 111.7 48.7 -63.8 -44.0 18.0 11.2 4.4 53 420 A L H X S+ 0 0 70 -4,-2.6 4,-1.9 1,-0.2 -2,-0.2 0.868 109.8 51.2 -65.1 -37.6 14.9 10.9 6.5 54 421 A R H X S+ 0 0 163 -4,-1.9 4,-2.1 1,-0.2 -1,-0.2 0.894 109.2 51.8 -66.5 -37.3 16.9 10.3 9.7 55 422 A K H X S+ 0 0 48 -4,-2.1 4,-2.0 1,-0.2 -2,-0.2 0.855 109.0 50.1 -66.9 -33.8 19.0 13.4 8.9 56 423 A L H < S+ 0 0 43 -4,-1.8 4,-0.3 2,-0.2 -1,-0.2 0.868 108.7 52.4 -71.0 -36.5 15.8 15.4 8.5 57 424 A K H >< S+ 0 0 166 -4,-1.9 3,-0.8 1,-0.2 4,-0.5 0.899 108.6 51.9 -64.4 -40.8 14.5 14.1 11.9 58 425 A Y H >< S+ 0 0 174 -4,-2.1 3,-1.4 1,-0.2 -2,-0.2 0.949 110.8 45.0 -61.5 -51.4 17.8 15.1 13.5 59 426 A H T 3< S+ 0 0 75 -4,-2.0 -1,-0.2 1,-0.3 -2,-0.2 0.397 101.7 67.0 -79.3 6.8 17.8 18.7 12.3 60 427 A E T < 0 0 86 -3,-0.8 -1,-0.3 -4,-0.3 -2,-0.2 0.581 360.0 360.0 -95.2 -14.9 14.1 19.2 13.1 61 428 A S < 0 0 129 -3,-1.4 -2,-0.2 -4,-0.5 -3,-0.1 0.950 360.0 360.0 -79.1 360.0 15.1 18.9 16.8