==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JUL-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 23-FEB-10 2KUO . COMPND 2 MOLECULE: APRATAXIN AND PNK-LIKE FACTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.Y.LI,R.D.MCCULLOCH,A.FENTON,M.CHEUNG,L.MENG,M.IKURA,C.A.KO . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7777.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 46.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 5.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 15 16.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 13.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 11.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -2 A G 0 0 135 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 150.1 -3.1 26.6 19.4 2 -1 A S - 0 0 105 1,-0.1 2,-1.5 0, 0.0 0, 0.0 -0.337 360.0 -63.2 -97.0-179.8 -3.3 23.0 20.4 3 360 A K - 0 0 201 -2,-0.1 2,-0.6 2,-0.0 -1,-0.1 -0.524 64.0-176.4 -67.8 92.1 -1.9 19.8 18.8 4 361 A A + 0 0 69 -2,-1.5 -1,-0.0 1,-0.1 0, 0.0 -0.852 21.6 180.0-101.4 114.2 -4.0 20.1 15.6 5 362 A T + 0 0 130 -2,-0.6 -1,-0.1 2,-0.1 -2,-0.0 0.513 38.9 132.3 -88.3 -5.4 -3.5 17.2 13.1 6 363 A D - 0 0 129 1,-0.1 2,-0.2 2,-0.0 -2,-0.1 -0.241 49.9-144.1 -53.0 121.4 -6.0 18.7 10.7 7 364 A S - 0 0 93 1,-0.1 2,-1.4 2,-0.0 3,-0.2 -0.585 26.3 -93.1 -91.3 153.5 -4.4 18.6 7.3 8 365 A V + 0 0 119 -2,-0.2 -1,-0.1 1,-0.2 -2,-0.0 -0.499 63.0 146.2 -70.4 92.8 -4.8 21.3 4.6 9 366 A L + 0 0 132 -2,-1.4 2,-0.3 5,-0.0 -1,-0.2 0.597 41.9 99.1 -99.4 -18.6 -7.7 20.0 2.6 10 367 A Q + 0 0 161 -3,-0.2 2,-0.3 2,-0.1 3,-0.1 -0.521 58.4 77.0 -72.4 131.7 -9.2 23.4 1.8 11 368 A G S > S- 0 0 38 -2,-0.3 3,-0.7 1,-0.1 -2,-0.0 -0.978 95.8 -55.8 161.0-166.2 -8.2 24.7 -1.6 12 369 A S T 3 S+ 0 0 134 -2,-0.3 -1,-0.1 1,-0.2 -2,-0.1 0.693 121.0 68.0 -77.2 -18.2 -9.0 24.4 -5.4 13 370 A E T 3 + 0 0 35 1,-0.1 2,-2.1 2,-0.1 -1,-0.2 -0.064 56.8 131.3 -95.6 31.3 -8.3 20.7 -5.2 14 371 A G < + 0 0 62 -3,-0.7 -1,-0.1 2,-0.1 2,-0.1 -0.329 37.4 150.1 -79.1 56.4 -11.4 19.9 -3.1 15 372 A N - 0 0 68 -2,-2.1 -2,-0.1 2,-0.2 -3,-0.0 -0.283 62.1-107.2 -84.7 175.1 -12.3 17.1 -5.6 16 373 A K S S+ 0 0 174 -2,-0.1 2,-0.3 2,-0.0 -1,-0.1 0.411 99.9 33.6 -89.4 0.8 -14.2 13.9 -4.8 17 374 A V S S- 0 0 83 0, 0.0 2,-0.5 0, 0.0 -2,-0.2 -0.970 78.4-118.8-147.4 159.5 -11.1 11.8 -5.1 18 375 A K - 0 0 120 -2,-0.3 -4,-0.0 -4,-0.1 22,-0.0 -0.898 32.3-130.7-101.6 128.4 -7.3 12.0 -4.4 19 376 A R - 0 0 32 -2,-0.5 2,-0.3 17,-0.1 20,-0.2 -0.112 26.3 -98.6 -68.6 172.6 -5.0 11.6 -7.4 20 377 A T E -a 39 0A 44 18,-2.3 20,-1.8 1,-0.1 -1,-0.1 -0.759 45.5 -92.0 -98.1 141.1 -2.0 9.3 -7.5 21 378 A S E -a 40 0A 6 -2,-0.3 2,-0.6 32,-0.2 20,-0.2 -0.299 40.3-114.3 -56.0 121.3 1.5 10.6 -6.9 22 379 A C > - 0 0 2 18,-2.8 3,-0.9 1,-0.2 5,-0.1 -0.477 23.0-147.1 -54.2 103.0 3.2 11.5 -10.2 23 380 A M T 3 S+ 0 0 78 -2,-0.6 31,-0.2 1,-0.3 -1,-0.2 0.775 102.4 39.2 -49.8 -27.6 5.9 8.9 -10.1 24 381 A Y T > S- 0 0 146 1,-0.2 3,-2.0 29,-0.1 -1,-0.3 0.647 93.9-173.1 -93.7 -19.4 8.1 11.5 -11.9 25 382 A G G X S- 0 0 5 -3,-0.9 3,-1.0 1,-0.3 -1,-0.2 -0.438 71.0 -7.5 64.9-126.2 6.7 14.4 -9.8 26 383 A A G 3 S+ 0 0 78 1,-0.2 -1,-0.3 -2,-0.2 15,-0.1 0.420 129.6 72.8 -80.6 0.3 7.9 17.7 -11.1 27 384 A N G < + 0 0 147 -3,-2.0 2,-0.4 -5,-0.1 -1,-0.2 0.509 68.8 107.5 -94.2 -7.3 10.2 15.8 -13.5 28 385 A C < - 0 0 18 -3,-1.0 -6,-0.0 1,-0.1 7,-0.0 -0.598 62.9-149.7 -74.5 128.1 7.4 14.8 -15.7 29 386 A Y S S+ 0 0 158 -2,-0.4 2,-0.7 2,-0.1 -1,-0.1 0.379 70.8 102.5 -82.0 3.0 7.5 16.7 -19.0 30 387 A R + 0 0 136 1,-0.1 -2,-0.1 5,-0.1 -3,-0.0 -0.826 35.3 161.0 -87.8 115.9 3.7 16.4 -19.3 31 388 A K + 0 0 162 -2,-0.7 -1,-0.1 4,-0.0 5,-0.1 0.284 32.8 123.6-117.4 2.4 2.2 19.8 -18.2 32 389 A N S >> S- 0 0 66 1,-0.1 3,-1.8 3,-0.0 4,-0.6 -0.463 74.3-118.9 -63.1 136.6 -1.1 19.1 -19.9 33 390 A P H >> S+ 0 0 108 0, 0.0 4,-1.2 0, 0.0 3,-0.8 0.769 111.9 65.9 -53.7 -28.9 -4.0 19.4 -17.3 34 391 A V H 3> S+ 0 0 82 1,-0.3 4,-0.9 2,-0.2 3,-0.5 0.887 92.5 60.3 -61.9 -37.0 -4.9 15.8 -17.9 35 392 A H H <> S+ 0 0 22 -3,-1.8 4,-0.7 1,-0.3 -1,-0.3 0.821 111.6 41.0 -58.4 -29.1 -1.6 14.7 -16.4 36 393 A F H << S+ 0 0 65 -3,-0.8 -1,-0.3 -4,-0.6 -2,-0.2 0.629 99.6 71.9 -93.3 -18.5 -2.7 16.5 -13.2 37 394 A Q H < S+ 0 0 130 -4,-1.2 -2,-0.2 -3,-0.5 -1,-0.2 0.729 118.5 19.3 -74.9 -20.0 -6.3 15.3 -13.2 38 395 A H H < S+ 0 0 76 -4,-0.9 -18,-2.3 1,-0.2 2,-0.4 0.523 126.8 54.8-121.6 -15.9 -5.2 11.7 -12.3 39 396 A F E < S-a 20 0A 49 -4,-0.7 2,-0.3 -5,-0.3 -18,-0.2 -0.978 70.9-143.8-121.1 136.8 -1.7 12.4 -10.9 40 397 A S E -a 21 0A 0 -20,-1.8 -18,-2.8 -2,-0.4 -15,-0.2 -0.682 17.7-154.6 -93.2 149.9 -0.8 14.8 -8.1 41 398 A H > - 0 0 11 -2,-0.3 3,-3.2 -20,-0.2 2,-1.1 -0.811 37.0 -75.2-125.0 160.6 2.4 16.8 -8.2 42 399 A P T 3 S+ 0 0 71 0, 0.0 3,-0.1 0, 0.0 6,-0.0 -0.373 126.7 35.4 -59.3 93.1 4.8 18.5 -5.6 43 400 A G T 3 S+ 0 0 73 -2,-1.1 2,-0.2 1,-0.5 -3,-0.0 0.127 91.6 113.7 144.4 -13.0 2.6 21.5 -4.8 44 401 A D X - 0 0 36 -3,-3.2 3,-1.0 1,-0.1 -1,-0.5 -0.575 67.4-135.1 -84.0 145.8 -0.8 19.8 -5.0 45 402 A S T 3 S+ 0 0 52 1,-0.2 -1,-0.1 -2,-0.2 -5,-0.0 0.785 110.1 54.7 -66.9 -26.4 -3.0 19.4 -2.0 46 403 A D T 3 S+ 0 0 13 -5,-0.1 -1,-0.2 -7,-0.1 2,-0.2 0.498 86.3 109.7 -86.7 -4.2 -3.6 15.9 -3.2 47 404 A Y < + 0 0 74 -3,-1.0 -6,-0.1 -6,-0.3 -27,-0.1 -0.515 26.4 149.7 -77.4 138.0 0.1 15.1 -3.3 48 405 A G - 0 0 48 -2,-0.2 -1,-0.2 -8,-0.1 6,-0.1 0.572 28.5-160.9-130.7 -50.2 1.5 12.7 -0.8 49 406 A G + 0 0 19 4,-0.2 5,-0.1 1,-0.1 -2,-0.1 0.583 63.5 107.9 73.9 9.0 4.5 10.9 -2.3 50 407 A V + 0 0 118 3,-0.1 2,-0.2 5,-0.1 4,-0.1 0.482 55.1 98.1 -93.6 -6.4 4.2 8.1 0.3 51 408 A Q S > S- 0 0 78 2,-0.3 4,-1.1 1,-0.1 5,-0.3 -0.502 88.6-116.0 -77.6 150.4 2.9 5.7 -2.3 52 409 A I H >> S+ 0 0 68 2,-0.2 4,-1.5 3,-0.2 2,-1.3 0.916 112.9 68.4 -51.3 -44.9 5.2 3.2 -4.0 53 410 A V H 34 S+ 0 0 27 1,-0.2 -2,-0.3 2,-0.2 -32,-0.2 -0.666 110.4 27.5 -75.2 95.6 4.4 5.1 -7.2 54 411 A G H 34 S+ 0 0 29 -2,-1.3 -1,-0.2 -31,-0.2 -2,-0.2 -0.014 131.0 34.3 138.6 -31.7 6.2 8.3 -6.2 55 412 A Q H << S- 0 0 124 -4,-1.1 2,-0.2 -3,-0.9 -3,-0.2 0.719 125.2 -43.6-115.1 -50.1 8.9 7.0 -3.8 56 413 A D < - 0 0 70 -4,-1.5 -1,-0.2 -5,-0.3 -3,-0.0 -0.798 34.8-170.0 174.6 141.6 10.0 3.6 -5.2 57 414 A E S S+ 0 0 83 -2,-0.2 6,-0.1 -3,-0.1 3,-0.1 0.457 84.1 47.9-117.4 -9.6 8.3 0.5 -6.5 58 415 A T > + 0 0 82 -6,-0.1 2,-3.0 1,-0.1 3,-1.6 0.876 54.5 176.6-105.4 -50.0 11.2 -2.0 -6.6 59 416 A D T 3 S- 0 0 107 1,-0.3 -1,-0.1 23,-0.0 -2,-0.0 -0.387 87.2 -38.4 68.3 -65.0 13.2 -2.0 -3.4 60 417 A D T 3 S+ 0 0 125 -2,-3.0 -1,-0.3 1,-0.5 -2,-0.1 0.368 123.3 8.5-156.5 -25.2 15.4 -4.7 -4.8 61 418 A R S < S- 0 0 86 -3,-1.6 -1,-0.5 1,-0.0 20,-0.1 -0.913 89.2 -59.7-159.0 170.2 13.2 -7.2 -6.8 62 419 A P - 0 0 83 0, 0.0 20,-2.0 0, 0.0 2,-0.3 -0.283 59.1-108.4 -61.4 151.3 9.7 -7.8 -8.3 63 420 A E B -b 82 0B 74 18,-0.3 20,-0.2 -6,-0.1 18,-0.0 -0.614 29.7-106.2 -87.7 142.3 6.8 -7.9 -5.9 64 421 A C > - 0 0 7 18,-2.9 3,-2.4 -2,-0.3 20,-0.2 -0.540 23.9-140.8 -66.8 121.7 5.0 -11.2 -5.0 65 422 A P T 3 S+ 0 0 101 0, 0.0 -1,-0.2 0, 0.0 18,-0.0 0.613 102.8 49.4 -64.7 -10.5 1.6 -11.0 -6.8 66 423 A Y T > S- 0 0 96 1,-0.3 3,-0.9 6,-0.0 -2,-0.1 0.436 100.4-146.7-104.6 -3.4 0.1 -12.7 -3.7 67 424 A G G X - 0 0 18 -3,-2.4 3,-1.2 1,-0.2 -1,-0.3 -0.354 60.4 -32.6 69.4-152.0 1.6 -10.3 -1.2 68 425 A P G 3 S+ 0 0 66 0, 0.0 -1,-0.2 0, 0.0 17,-0.1 0.614 137.1 69.2 -76.2 -11.7 2.6 -11.7 2.3 69 426 A S G < S+ 0 0 89 -3,-0.9 2,-0.3 2,-0.0 -2,-0.2 0.293 71.0 137.3 -85.1 8.1 -0.4 -14.0 1.9 70 427 A C < - 0 0 21 -3,-1.2 -3,-0.0 1,-0.2 -6,-0.0 -0.414 34.3-175.0 -60.2 117.3 1.6 -15.7 -0.8 71 428 A Y + 0 0 139 -2,-0.3 2,-0.6 2,-0.1 -1,-0.2 0.247 37.2 133.4-100.2 11.5 1.1 -19.5 -0.3 72 429 A R - 0 0 112 1,-0.1 2,-1.4 2,-0.1 6,-0.1 -0.520 53.4-143.2 -66.4 109.3 3.6 -20.3 -3.0 73 430 A K + 0 0 204 -2,-0.6 -1,-0.1 4,-0.1 -2,-0.1 -0.633 57.8 102.8 -85.0 86.8 5.7 -23.0 -1.4 74 431 A N > - 0 0 80 -2,-1.4 4,-1.6 1,-0.1 5,-0.2 -0.808 57.6-149.0-166.5 125.7 9.2 -22.3 -2.6 75 432 A P H > S+ 0 0 92 0, 0.0 4,-0.9 0, 0.0 5,-0.1 0.866 103.0 55.4 -64.7 -35.5 12.3 -20.7 -1.1 76 433 A Q H > S+ 0 0 91 2,-0.2 4,-2.1 1,-0.2 3,-0.5 0.896 103.2 55.6 -64.6 -37.7 13.5 -19.4 -4.4 77 434 A H H > S+ 0 0 20 1,-0.3 4,-2.7 2,-0.2 3,-0.3 0.950 106.6 49.3 -57.9 -51.5 10.2 -17.7 -5.0 78 435 A K H < S+ 0 0 117 -4,-1.6 -1,-0.3 1,-0.2 5,-0.2 0.711 111.2 53.0 -58.8 -23.8 10.6 -15.8 -1.7 79 436 A I H < S+ 0 0 104 -4,-0.9 -1,-0.2 -3,-0.5 -2,-0.2 0.856 113.6 39.8 -80.3 -36.9 14.1 -14.9 -3.0 80 437 A E H < S+ 0 0 98 -4,-2.1 2,-0.3 -3,-0.3 -2,-0.2 0.850 115.8 50.3 -84.3 -34.8 12.9 -13.5 -6.3 81 438 A Y S < S- 0 0 81 -4,-2.7 2,-0.6 -5,-0.2 -18,-0.3 -0.698 79.9-119.5-108.7 154.9 9.8 -11.7 -5.2 82 439 A R B -b 63 0B 33 -20,-2.0 -18,-2.9 -2,-0.3 2,-1.3 -0.838 14.4-154.9 -91.4 120.0 9.1 -9.2 -2.4 83 440 A H - 0 0 40 -2,-0.6 2,-0.5 -5,-0.2 -20,-0.1 -0.677 22.1-153.2 -92.4 78.5 6.5 -10.4 0.1 84 441 A N - 0 0 51 -2,-1.3 2,-0.4 -20,-0.2 -2,-0.0 -0.380 7.1-158.7 -63.4 106.3 5.5 -6.9 1.1 85 442 A T - 0 0 119 -2,-0.5 -1,-0.1 -18,-0.1 -18,-0.0 -0.699 9.0-142.5 -89.0 138.4 4.2 -7.1 4.6 86 443 A L - 0 0 115 -2,-0.4 -1,-0.0 1,-0.1 0, 0.0 -0.767 12.4-137.3-108.4 144.9 2.0 -4.3 5.7 87 444 A P + 0 0 95 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 0.902 26.4 176.7 -62.6 -44.2 1.8 -2.6 9.1 88 445 A V + 0 0 122 1,-0.2 2,-0.1 2,-0.0 -2,-0.0 0.706 34.0 148.8 41.9 27.7 -2.1 -2.5 9.1 89 446 A R - 0 0 185 1,-0.0 2,-0.6 2,-0.0 -1,-0.2 -0.462 52.6-136.8 -91.5 158.1 -1.5 -1.0 12.6 90 447 A N 0 0 153 -2,-0.1 -1,-0.0 -3,-0.1 -2,-0.0 -0.748 360.0 360.0-116.0 79.8 -3.7 1.6 14.4 91 448 A V 0 0 179 -2,-0.6 -2,-0.0 0, 0.0 0, 0.0 -0.732 360.0 360.0-117.1 360.0 -1.2 4.0 15.9