==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER UNKNOWN FUNCTION 22-APR-10 2KX0 . COMPND 2 MOLECULE: UBIQUITIN B; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.KO . 103 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7847.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 47.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 3.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 14.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 134 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 172.1 2.1 0.0 -1.2 2 2 A S - 0 0 126 1,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.347 360.0-112.7 -90.7 174.3 2.7 2.7 -3.9 3 3 A L - 0 0 128 -2,-0.1 -1,-0.0 3,-0.0 0, 0.0 -0.930 22.9-126.8-114.2 132.2 0.5 3.6 -6.9 4 4 A V - 0 0 95 -2,-0.4 2,-0.5 1,-0.1 0, 0.0 -0.571 28.9-113.5 -78.1 133.3 1.5 3.1 -10.5 5 5 A P + 0 0 57 0, 0.0 2,-0.2 0, 0.0 94,-0.1 -0.531 53.2 153.1 -69.8 114.9 1.3 6.1 -12.8 6 6 A R - 0 0 110 -2,-0.5 95,-0.1 92,-0.3 91,-0.1 -0.791 48.3 -55.7-134.7 177.2 -1.4 5.6 -15.4 7 7 A G + 0 0 17 93,-0.6 2,-0.3 -2,-0.2 21,-0.2 -0.153 52.7 179.4 -55.0 148.8 -3.8 7.7 -17.5 8 8 A S - 0 0 50 18,-0.2 2,-0.3 19,-0.1 18,-0.2 -0.906 7.0-177.2-158.6 125.5 -6.1 10.1 -15.7 9 9 A M E -A 25 0A 35 16,-1.9 16,-2.1 -2,-0.3 2,-0.4 -0.857 27.1-114.2-123.1 158.5 -8.7 12.5 -17.0 10 10 A Q E -A 24 0A 110 -2,-0.3 2,-0.3 14,-0.2 14,-0.2 -0.750 33.0-173.9 -94.7 137.6 -11.0 15.1 -15.3 11 11 A I E -A 23 0A 0 12,-3.2 12,-1.9 -2,-0.4 2,-0.5 -0.807 22.1-119.1-125.7 167.2 -14.7 14.7 -15.2 12 12 A F E -Ab 22 74A 101 61,-1.3 63,-2.1 -2,-0.3 2,-0.4 -0.927 28.8-179.0-112.4 128.2 -17.8 16.7 -14.1 13 13 A V E -Ab 21 75A 0 8,-1.6 8,-2.9 -2,-0.5 2,-0.3 -0.965 16.2-141.8-127.7 143.2 -20.1 15.5 -11.4 14 14 A K E -Ab 20 76A 71 61,-3.2 63,-1.5 -2,-0.4 6,-0.2 -0.810 14.5-150.7-104.8 143.8 -23.3 17.0 -9.9 15 15 A T > - 0 0 17 4,-1.9 3,-0.9 -2,-0.3 63,-0.1 -0.413 32.5-101.7-102.4-179.6 -24.3 16.9 -6.3 16 16 A L T 3 S+ 0 0 130 1,-0.3 -1,-0.0 2,-0.1 62,-0.0 0.704 119.5 61.3 -75.1 -20.1 -27.7 16.9 -4.5 17 17 A T T 3 S- 0 0 108 2,-0.2 -1,-0.3 1,-0.0 3,-0.1 0.007 121.9-104.3 -95.1 27.9 -27.2 20.6 -3.7 18 18 A G S < S+ 0 0 72 -3,-0.9 2,-0.5 1,-0.2 -2,-0.1 0.819 80.3 137.5 54.5 32.1 -27.0 21.5 -7.4 19 19 A K - 0 0 105 2,-0.0 -4,-1.9 0, 0.0 2,-0.5 -0.940 49.2-140.1-114.9 129.2 -23.3 21.9 -7.0 20 20 A T E -A 14 0A 76 -2,-0.5 2,-0.4 -6,-0.2 -6,-0.2 -0.748 18.1-165.2 -89.8 126.1 -20.8 20.6 -9.6 21 21 A I E -A 13 0A 15 -8,-2.9 -8,-1.6 -2,-0.5 2,-0.4 -0.929 16.5-129.5-114.9 134.2 -17.7 19.0 -8.2 22 22 A T E +A 12 0A 70 -2,-0.4 2,-0.3 -10,-0.2 -10,-0.2 -0.650 31.7 177.6 -82.9 131.0 -14.5 18.3 -10.3 23 23 A L E -A 11 0A 5 -12,-1.9 -12,-3.2 -2,-0.4 2,-0.4 -0.934 20.1-143.6-132.9 155.9 -13.1 14.7 -10.0 24 24 A E E +A 10 0A 39 -2,-0.3 2,-0.3 -14,-0.2 -14,-0.2 -0.979 25.2 161.5-124.7 127.8 -10.3 12.8 -11.6 25 25 A V E -A 9 0A 0 -16,-2.1 -16,-1.9 -2,-0.4 9,-0.0 -0.999 37.4-108.2-145.2 145.5 -10.4 9.1 -12.6 26 26 A E - 0 0 24 -2,-0.3 38,-0.4 -18,-0.2 -18,-0.2 -0.320 25.4-123.8 -70.6 153.6 -8.3 6.9 -14.9 27 27 A P S S+ 0 0 53 0, 0.0 38,-1.5 0, 0.0 39,-0.2 0.699 115.1 41.0 -69.8 -19.8 -9.8 5.6 -18.1 28 28 A S S S+ 0 0 75 -21,-0.2 -20,-0.1 36,-0.1 -2,-0.0 0.568 96.2 101.9-102.5 -14.7 -9.2 2.0 -17.0 29 29 A D - 0 0 22 34,-0.1 35,-2.7 1,-0.1 36,-0.3 -0.172 67.1-127.0 -66.3 163.5 -10.3 2.6 -13.4 30 30 A T B >> -E 63 0B 38 33,-0.3 3,-2.0 34,-0.1 4,-1.2 -0.587 31.6 -92.0-108.8 172.4 -13.7 1.4 -12.2 31 31 A I H 3> S+ 0 0 8 31,-0.6 4,-2.1 28,-0.4 5,-0.2 0.790 123.2 67.3 -52.6 -28.7 -16.5 3.2 -10.3 32 32 A E H 3> S+ 0 0 91 1,-0.2 4,-0.7 2,-0.2 -1,-0.3 0.844 100.8 47.0 -61.5 -34.4 -14.8 2.0 -7.1 33 33 A N H <> S+ 0 0 65 -3,-2.0 4,-0.8 2,-0.2 -1,-0.2 0.803 107.5 57.8 -77.2 -30.5 -11.9 4.3 -7.9 34 34 A V H >X S+ 0 0 1 -4,-1.2 3,-1.4 1,-0.2 4,-1.2 0.966 104.1 48.7 -63.8 -54.9 -14.2 7.2 -8.6 35 35 A K H 3X S+ 0 0 45 -4,-2.1 4,-1.6 1,-0.3 -1,-0.2 0.787 99.0 72.5 -56.5 -27.5 -16.0 7.3 -5.3 36 36 A A H 3< S+ 0 0 27 -4,-0.7 4,-0.4 1,-0.2 -1,-0.3 0.889 101.1 41.6 -55.1 -42.1 -12.5 7.1 -3.7 37 37 A K H XX S+ 0 0 56 -3,-1.4 3,-1.0 -4,-0.8 4,-0.6 0.797 106.9 63.0 -76.2 -29.7 -12.0 10.8 -4.7 38 38 A I H >X>S+ 0 0 2 -4,-1.2 4,-3.0 1,-0.2 5,-1.4 0.812 87.8 71.7 -64.4 -30.4 -15.5 11.7 -3.7 39 39 A Q H 3<5S+ 0 0 73 -4,-1.6 -1,-0.2 1,-0.3 -2,-0.2 0.839 98.2 48.8 -54.3 -34.6 -14.7 10.8 -0.1 40 40 A D H <45S+ 0 0 92 -3,-1.0 -1,-0.3 -4,-0.4 -2,-0.2 0.732 112.8 48.7 -77.7 -23.3 -12.5 13.9 0.0 41 41 A K H <<5S- 0 0 74 -3,-0.9 -2,-0.2 -4,-0.6 -1,-0.1 0.931 144.6 -14.4 -80.8 -51.0 -15.3 16.0 -1.4 42 42 A E T <5S- 0 0 91 -4,-3.0 -3,-0.2 2,-0.1 -2,-0.1 0.627 82.9-133.4-122.5 -35.4 -18.1 14.8 0.9 43 43 A G < + 0 0 28 -5,-1.4 -4,-0.2 1,-0.2 43,-0.2 0.987 44.4 155.6 75.4 64.8 -16.8 11.7 2.5 44 44 A I - 0 0 7 -9,-0.2 -1,-0.2 39,-0.1 -2,-0.1 -0.907 41.0-107.1-124.8 152.4 -19.6 9.2 2.2 45 45 A P >> - 0 0 25 0, 0.0 4,-2.1 0, 0.0 3,-0.5 -0.150 30.1-111.4 -69.8 167.3 -19.7 5.4 2.2 46 46 A P T 34 S+ 0 0 76 0, 0.0 -11,-0.0 0, 0.0 -2,-0.0 0.815 115.6 61.8 -69.7 -31.7 -20.4 3.2 -0.9 47 47 A D T 34 S+ 0 0 129 1,-0.2 34,-0.3 3,-0.0 33,-0.2 0.751 117.7 30.1 -66.5 -23.7 -23.8 2.1 0.5 48 48 A Q T <4 S+ 0 0 16 -3,-0.5 2,-0.6 32,-0.1 32,-0.2 0.652 110.4 75.6-106.2 -24.6 -24.9 5.8 0.4 49 49 A Q < + 0 0 11 -4,-2.1 2,-0.4 30,-0.1 30,-0.1 -0.820 58.6 166.8 -95.7 118.8 -22.7 6.9 -2.5 50 50 A R - 0 0 111 -2,-0.6 28,-1.5 28,-0.5 2,-0.4 -0.997 26.1-139.4-135.2 135.4 -24.0 5.8 -5.9 51 51 A L E -C 77 0A 2 7,-0.4 7,-2.8 -2,-0.4 2,-0.4 -0.738 16.0-158.4 -94.8 139.9 -23.0 6.9 -9.4 52 52 A I E -CD 76 57A 32 24,-1.4 24,-0.9 -2,-0.4 2,-0.4 -0.936 9.6-177.3-120.3 141.3 -25.6 7.5 -12.2 53 53 A F E > S- D 0 56A 48 3,-2.6 3,-2.5 -2,-0.4 22,-0.1 -0.949 72.9 -20.1-141.5 117.9 -25.1 7.5 -15.9 54 54 A A T 3 S- 0 0 98 -2,-0.4 3,-0.1 20,-0.4 21,-0.1 0.819 126.9 -54.0 56.7 31.6 -27.7 8.2 -18.5 55 55 A G T 3 S+ 0 0 71 1,-0.2 2,-0.5 0, 0.0 -1,-0.3 0.334 121.7 109.3 86.1 -8.3 -30.3 7.4 -15.9 56 56 A K E < S-D 53 0A 144 -3,-2.5 -3,-2.6 1,-0.0 -1,-0.2 -0.901 70.3-123.8-107.1 125.1 -28.6 4.0 -15.3 57 57 A Q E -D 52 0A 109 -2,-0.5 2,-0.3 -5,-0.2 -5,-0.3 -0.165 24.9-129.1 -60.4 156.6 -26.7 3.4 -12.0 58 58 A L - 0 0 19 -7,-2.8 -7,-0.4 -27,-0.0 2,-0.3 -0.842 25.3-178.9-112.4 149.0 -23.1 2.4 -12.2 59 59 A E > - 0 0 115 -2,-0.3 3,-0.6 1,-0.2 -28,-0.4 -0.874 31.4 -86.4-138.6 170.8 -21.3 -0.5 -10.5 60 60 A D T 3 S+ 0 0 92 -2,-0.3 2,-1.2 1,-0.2 -1,-0.2 0.165 94.3 64.2 -63.9-170.5 -17.9 -2.1 -10.1 61 61 A G T 3 S+ 0 0 56 1,-0.1 -1,-0.2 0, 0.0 2,-0.2 -0.278 95.3 70.3 86.8 -51.0 -16.5 -4.6 -12.5 62 62 A R S < S- 0 0 143 -2,-1.2 -31,-0.6 -3,-0.6 2,-0.2 -0.488 78.9-122.4 -96.2 168.4 -16.5 -2.2 -15.5 63 63 A T B >> -E 30 0B 25 -33,-0.2 4,-1.4 -2,-0.2 3,-1.0 -0.700 26.8-106.5-109.4 162.4 -14.2 0.8 -16.1 64 64 A L T 34>S+ 0 0 2 -35,-2.7 5,-2.5 -38,-0.4 3,-0.3 0.869 123.0 54.3 -52.2 -39.5 -15.0 4.5 -16.7 65 65 A S T >45S+ 0 0 78 -38,-1.5 3,-0.9 -36,-0.3 -1,-0.3 0.813 105.1 53.8 -65.7 -30.3 -14.1 4.0 -20.3 66 66 A E T <45S+ 0 0 128 -3,-1.0 -1,-0.2 1,-0.2 -2,-0.2 0.766 104.9 54.0 -74.9 -26.2 -16.6 1.1 -20.5 67 67 A Y T 3<5S- 0 0 43 -4,-1.4 -1,-0.2 -3,-0.3 -2,-0.2 0.241 116.3-114.6 -91.3 12.7 -19.4 3.3 -19.2 68 68 A N T < 5 + 0 0 118 -3,-0.9 2,-1.1 1,-0.2 -3,-0.2 0.738 64.2 155.6 60.8 22.0 -18.7 5.9 -21.9 69 69 A I < + 0 0 3 -5,-2.5 -1,-0.2 -6,-0.2 -2,-0.1 -0.702 16.0 173.8 -85.5 99.0 -17.6 8.2 -19.1 70 70 A Q > - 0 0 106 -2,-1.1 3,-1.3 -3,-0.1 -61,-0.0 -0.127 52.4 -84.2 -91.1-169.3 -15.2 10.7 -20.8 71 71 A K T 3 S+ 0 0 127 1,-0.3 -2,-0.1 -60,-0.1 -1,-0.0 0.544 132.4 45.1 -75.0 -6.2 -13.5 13.8 -19.4 72 72 A E T 3 S+ 0 0 141 -61,-0.1 -1,-0.3 2,-0.0 2,-0.2 0.026 86.2 128.0-123.9 24.3 -16.7 15.7 -20.3 73 73 A S < - 0 0 11 -3,-1.3 -61,-1.3 1,-0.0 2,-0.7 -0.511 57.3-126.4 -83.2 151.2 -19.2 13.2 -18.9 74 74 A T E -b 12 0A 76 -2,-0.2 -20,-0.4 -63,-0.1 2,-0.3 -0.874 28.8-173.8-103.3 113.4 -22.0 14.2 -16.5 75 75 A L E -b 13 0A 1 -63,-2.1 -61,-3.2 -2,-0.7 2,-0.4 -0.745 7.2-157.9-105.4 153.5 -22.2 12.1 -13.3 76 76 A H E -bC 14 52A 94 -24,-0.9 -24,-1.4 -2,-0.3 2,-0.6 -0.996 6.1-149.9-134.4 134.3 -24.8 12.2 -10.6 77 77 A L E - C 0 51A 10 -63,-1.5 2,-0.5 -2,-0.4 -26,-0.2 -0.902 15.9-173.8-107.2 116.2 -24.6 11.2 -6.9 78 78 A V - 0 0 65 -28,-1.5 -28,-0.5 -2,-0.6 2,-0.4 -0.925 8.4-154.7-112.7 130.4 -27.8 9.9 -5.3 79 79 A L + 0 0 73 -2,-0.5 -30,-0.1 1,-0.1 -31,-0.1 -0.843 20.8 166.8-105.3 138.6 -28.0 9.1 -1.6 80 80 A R + 0 0 187 -2,-0.4 2,-0.2 -33,-0.2 -1,-0.1 0.732 67.0 24.6-113.5 -45.4 -30.5 6.6 -0.1 81 81 A L S S- 0 0 96 -34,-0.3 2,-0.4 0, 0.0 -1,-0.1 -0.472 76.7-113.3-112.5-174.7 -29.3 6.0 3.4 82 82 A R + 0 0 215 -2,-0.2 -38,-0.0 1,-0.1 -35,-0.0 -0.967 39.8 144.2-127.0 141.1 -27.2 7.8 6.0 83 83 A G + 0 0 28 -2,-0.4 -1,-0.1 -38,-0.1 -39,-0.1 0.255 12.1 150.8-133.2-100.1 -23.8 6.9 7.4 84 84 A Y + 0 0 131 1,-0.1 -40,-0.1 -41,-0.1 -1,-0.0 0.861 41.4 127.3 58.2 36.9 -21.0 9.3 8.4 85 85 A A + 0 0 86 2,-0.1 2,-0.3 -3,-0.0 -1,-0.1 -0.065 57.7 60.4-112.6 30.8 -19.9 6.8 11.0 86 86 A D - 0 0 124 -43,-0.2 2,-0.3 2,-0.0 -3,-0.0 -0.855 66.9-133.3-144.7 178.6 -16.3 6.6 9.9 87 87 A L - 0 0 167 -2,-0.3 2,-0.3 2,-0.0 -2,-0.1 -0.846 6.2-158.6-134.1 170.5 -13.1 8.7 9.4 88 88 A R + 0 0 157 -2,-0.3 2,-0.3 -49,-0.0 -2,-0.0 -0.888 23.2 145.6-157.0 120.9 -10.4 9.3 6.8 89 89 A E + 0 0 176 -2,-0.3 -2,-0.0 2,-0.0 0, 0.0 -0.830 13.4 135.7-161.0 116.9 -6.9 10.7 7.2 90 90 A D - 0 0 87 -2,-0.3 3,-0.1 0, 0.0 -2,-0.0 -0.935 39.5-124.3-164.7 138.8 -3.7 9.8 5.4 91 91 A P S S+ 0 0 89 0, 0.0 3,-0.1 0, 0.0 -2,-0.0 0.121 83.3 65.0 -69.8-170.4 -0.8 11.7 3.8 92 92 A D S S+ 0 0 133 1,-0.2 3,-0.2 2,-0.1 2,-0.2 0.788 81.8 129.4 61.3 27.4 0.5 11.3 0.2 93 93 A R + 0 0 113 1,-0.2 -1,-0.2 -3,-0.1 3,-0.1 -0.646 45.8 36.0-109.5 167.9 -2.9 12.8 -0.9 94 94 A Q S S+ 0 0 162 -2,-0.2 2,-0.4 1,-0.2 -1,-0.2 0.929 82.7 137.9 56.9 48.5 -3.8 15.7 -3.2 95 95 A D - 0 0 82 -3,-0.2 2,-0.4 2,-0.0 -1,-0.2 -0.987 49.1-138.1-130.3 125.2 -0.9 14.9 -5.6 96 96 A H - 0 0 151 -2,-0.4 -3,-0.0 -3,-0.1 0, 0.0 -0.667 23.0-164.1 -83.4 129.2 -1.1 14.9 -9.4 97 97 A H - 0 0 92 -2,-0.4 -89,-0.0 1,-0.2 -91,-0.0 -0.741 19.3-105.0-112.0 160.6 0.7 12.0 -11.1 98 98 A P - 0 0 85 0, 0.0 -92,-0.3 0, 0.0 2,-0.3 0.059 34.0-124.6 -69.8-175.1 1.8 11.5 -14.7 99 99 A G + 0 0 52 -94,-0.1 2,-0.3 -92,-0.1 -92,-0.2 -0.796 24.8 172.3-131.0 173.7 0.2 9.3 -17.3 100 100 A S + 0 0 64 -2,-0.3 -93,-0.6 2,-0.0 2,-0.1 -0.974 31.1 66.8-168.1 173.7 1.0 6.4 -19.6 101 101 A G - 0 0 73 -2,-0.3 2,-0.3 -95,-0.1 -2,-0.0 -0.179 67.8 -85.1 91.8 172.0 -0.4 3.8 -22.0 102 102 A A 0 0 109 1,-0.1 -95,-0.1 -2,-0.1 -2,-0.0 -0.752 360.0 360.0-116.9 164.6 -2.1 4.1 -25.4 103 103 A Q 0 0 247 -2,-0.3 -1,-0.1 0, 0.0 -2,-0.0 0.382 360.0 360.0-130.7 360.0 -5.7 4.8 -26.5