==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 06-FEB-02 1KZ5 . COMPND 2 MOLECULE: ANTENNAPEDIA PROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.CZAJLIK,E.MESKO,B.PENKE,A.PERCZEL . 12 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1800.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 4 33.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R 0 0 262 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -29.6 2.9 8.0 -4.4 2 2 A Q + 0 0 124 1,-0.1 0, 0.0 2,-0.0 0, 0.0 0.934 360.0 174.7 -62.0 -42.4 0.2 7.3 -1.8 3 3 A I + 0 0 74 1,-0.1 -1,-0.1 3,-0.0 0, 0.0 0.823 46.9 101.9 39.0 41.2 1.6 3.8 -1.1 4 4 A K S > S+ 0 0 161 3,-0.1 4,-0.5 2,-0.1 -1,-0.1 0.727 81.6 37.6-116.3 -45.5 -0.9 3.3 1.7 5 5 A I H > S+ 0 0 115 2,-0.2 4,-0.6 1,-0.2 3,-0.3 0.886 120.9 51.4 -72.7 -34.1 -3.6 1.0 0.2 6 6 A W H >> S+ 0 0 109 1,-0.2 3,-2.9 2,-0.2 4,-1.1 0.985 104.4 53.2 -63.1 -57.2 -0.7 -0.7 -1.7 7 7 A F H 34 S+ 0 0 117 1,-0.3 -1,-0.2 2,-0.2 -2,-0.2 0.737 108.9 54.8 -50.6 -20.0 1.3 -1.2 1.5 8 8 A R H 3< S+ 0 0 207 -4,-0.5 -1,-0.3 -3,-0.3 -2,-0.2 0.632 110.7 43.2 -91.0 -15.5 -2.0 -2.8 2.7 9 9 A K H << S+ 0 0 138 -3,-2.9 -2,-0.2 -4,-0.6 -3,-0.1 0.900 128.7 0.9 -93.8 -70.6 -2.3 -5.3 -0.2 10 10 A W S < S- 0 0 162 -4,-1.1 -3,-0.0 0, 0.0 -4,-0.0 0.654 96.4 -88.8 -86.4-112.3 1.2 -6.8 -0.9 11 11 A K 0 0 171 1,-0.0 -4,-0.1 -3,-0.0 -3,-0.1 -0.094 360.0 360.0-159.1 38.9 4.1 -5.8 1.3 12 12 A K 0 0 160 -6,-0.3 -5,-0.1 0, 0.0 -4,-0.0 0.816 360.0 360.0 -34.0 360.0 5.5 -2.7 -0.5