==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-JAN-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 02-MAY-11 2LCL . COMPND 2 MOLECULE: TRANSCRIPTIONAL ACTIVATOR RFAH; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR B.M.BURMANN,K.SCHWEIMER,P.ROESCH . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5417.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 36 54.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 30.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 97 A G 0 0 127 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-122.7 -1.9 11.4 -1.9 2 98 A A - 0 0 75 1,-0.1 4,-0.1 2,-0.1 0, 0.0 -0.325 360.0-126.9 -62.2 144.3 -0.0 13.2 -4.7 3 99 A M S S+ 0 0 201 2,-0.1 -1,-0.1 0, 0.0 0, 0.0 0.910 94.5 69.4 -61.0 -38.8 -1.6 12.8 -8.1 4 100 A G S S- 0 0 46 1,-0.1 2,-0.2 2,-0.0 -2,-0.1 -0.546 98.3-103.9 -81.6 148.0 1.7 11.6 -9.5 5 101 A P - 0 0 101 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.449 17.2-138.0 -70.4 136.7 3.0 8.1 -8.4 6 102 A K S S- 0 0 187 -2,-0.2 2,-0.3 -4,-0.1 4,-0.1 0.887 85.6 -0.8 -63.8 -35.0 5.8 8.2 -5.9 7 103 A D S S- 0 0 83 1,-0.1 3,-0.1 -3,-0.0 -1,-0.0 -0.845 86.2 -90.1-142.9-179.9 7.5 5.3 -7.8 8 104 A I S S+ 0 0 174 -2,-0.3 2,-0.5 1,-0.2 -1,-0.1 0.937 116.9 35.1 -63.3 -43.4 7.0 3.2 -10.9 9 105 A V S S- 0 0 107 -3,-0.0 -1,-0.2 -4,-0.0 0, 0.0 -0.937 81.5-147.1-115.1 128.6 5.2 0.5 -8.9 10 106 A D - 0 0 85 -2,-0.5 2,-3.0 1,-0.1 3,-0.4 -0.468 36.9 -92.1 -88.5 164.8 2.9 1.5 -5.9 11 107 A P S S+ 0 0 101 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.215 70.4 142.6 -70.3 54.0 2.5 -0.6 -2.7 12 108 A A + 0 0 83 -2,-3.0 -3,-0.0 2,-0.1 -2,-0.0 0.820 36.0 108.0 -67.0 -26.6 -0.6 -2.4 -4.2 13 109 A T S S- 0 0 63 -3,-0.4 2,-0.1 1,-0.1 27,-0.0 -0.333 75.3-128.6 -55.2 118.3 0.6 -5.6 -2.5 14 110 A P - 0 0 19 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.408 20.6-116.6 -70.4 142.3 -2.0 -6.1 0.4 15 111 A Y > - 0 0 166 1,-0.1 3,-1.4 -2,-0.1 19,-0.3 -0.368 39.1 -86.8 -76.9 161.2 -0.5 -6.7 3.9 16 112 A P T 3 S+ 0 0 97 0, 0.0 19,-0.1 0, 0.0 -1,-0.1 -0.474 114.5 28.2 -69.3 129.4 -1.1 -9.9 5.7 17 113 A G T 3 S+ 0 0 47 17,-0.7 18,-0.1 1,-0.4 -2,-0.0 0.244 88.2 131.1 104.3 -13.5 -4.4 -10.0 7.7 18 114 A D < - 0 0 48 -3,-1.4 16,-1.2 16,-0.1 -1,-0.4 -0.319 64.2-106.7 -69.5 156.7 -6.1 -7.5 5.4 19 115 A K E -A 33 0A 126 14,-0.2 47,-1.2 -3,-0.1 2,-0.3 -0.658 37.6-169.2 -86.4 139.6 -9.6 -8.4 4.2 20 116 A V E -AB 32 65A 0 12,-3.1 12,-2.6 -2,-0.3 2,-0.4 -0.921 10.2-146.8-127.2 154.1 -10.0 -9.5 0.5 21 117 A I E -AB 31 64A 43 43,-2.5 43,-2.9 -2,-0.3 2,-0.4 -0.953 12.6-134.8-122.4 139.8 -13.0 -10.1 -1.7 22 118 A I E + B 0 63A 11 8,-1.4 7,-1.9 -2,-0.4 41,-0.2 -0.726 20.2 177.6 -92.6 139.4 -13.4 -12.7 -4.5 23 119 A T + 0 0 34 39,-0.9 2,-0.3 -2,-0.4 40,-0.2 0.513 67.9 45.3-115.1 -10.8 -14.9 -11.6 -7.8 24 120 A E S S+ 0 0 107 38,-1.2 3,-0.2 3,-0.1 -1,-0.1 -0.927 89.8 38.9-131.4 157.3 -14.5 -14.9 -9.7 25 121 A G S > S- 0 0 55 -2,-0.3 3,-1.9 1,-0.2 -3,-0.0 -0.056 101.1 -69.6 90.1 162.1 -15.3 -18.6 -8.8 26 122 A A T 3 S+ 0 0 97 1,-0.3 -1,-0.2 3,-0.0 -4,-0.0 0.699 130.9 69.8 -63.9 -13.5 -18.2 -19.9 -6.8 27 123 A F T > S+ 0 0 81 -3,-0.2 3,-1.7 2,-0.1 -5,-0.4 0.310 71.0 133.1 -86.6 12.7 -16.5 -18.2 -3.8 28 124 A E T < + 0 0 118 -3,-1.9 -5,-0.2 1,-0.3 3,-0.1 -0.379 67.0 29.0 -63.4 137.9 -17.4 -14.9 -5.3 29 125 A G T 3 S+ 0 0 58 -7,-1.9 2,-0.4 1,-0.3 -1,-0.3 0.458 96.0 117.6 91.1 -0.8 -18.9 -12.5 -2.7 30 126 A F < - 0 0 90 -3,-1.7 -8,-1.4 -8,-0.2 -1,-0.3 -0.821 59.9-135.4-102.5 139.3 -17.0 -14.2 0.1 31 127 A Q E -A 21 0A 99 -2,-0.4 17,-0.9 -10,-0.2 2,-0.3 -0.670 25.6-179.5 -91.5 146.7 -14.4 -12.3 2.2 32 128 A A E -AC 20 47A 1 -12,-2.6 -12,-3.1 -2,-0.3 2,-0.4 -0.946 21.6-129.7-140.7 162.2 -11.0 -13.9 2.9 33 129 A I E -AC 19 46A 58 13,-0.7 13,-1.1 -2,-0.3 2,-0.7 -0.940 32.7-107.0-117.5 135.0 -7.8 -12.9 4.8 34 130 A F E + C 0 45A 5 -16,-1.2 -17,-0.7 -2,-0.4 11,-0.3 -0.378 38.5 178.3 -58.6 104.4 -4.3 -13.1 3.3 35 131 A T - 0 0 46 9,-2.4 -1,-0.2 -2,-0.7 10,-0.2 0.842 69.8 -40.0 -79.8 -32.1 -2.9 -16.1 5.3 36 132 A E - 0 0 135 8,-1.1 2,-0.3 -3,-0.1 -1,-0.1 -0.159 57.4-142.4 163.7 93.6 0.5 -16.0 3.4 37 133 A P - 0 0 46 0, 0.0 6,-0.2 0, 0.0 3,-0.1 -0.498 7.2-148.3 -70.2 126.7 1.0 -15.3 -0.3 38 134 A D S S- 0 0 111 -2,-0.3 2,-0.3 1,-0.1 5,-0.2 0.802 77.1 -23.2 -66.8 -24.9 3.7 -17.4 -1.8 39 135 A G S S- 0 0 31 3,-1.6 -1,-0.1 1,-0.1 -3,-0.1 -0.967 74.7 -84.9-168.0-179.4 4.5 -14.5 -4.2 40 136 A E S S+ 0 0 118 -2,-0.3 20,-0.1 1,-0.2 3,-0.1 0.797 124.6 52.8 -72.6 -24.9 3.0 -11.4 -5.9 41 137 A A S S+ 0 0 71 1,-0.1 19,-1.6 18,-0.1 20,-0.3 0.961 118.9 27.9 -75.3 -51.5 1.5 -13.6 -8.6 42 138 A R E S- D 0 59A 131 17,-0.2 -3,-1.6 18,-0.1 2,-0.3 -0.820 71.5-172.5-110.5 151.3 -0.3 -16.1 -6.3 43 139 A S E - D 0 58A 3 15,-1.9 15,-1.8 -2,-0.3 2,-0.6 -0.969 22.1-126.2-139.7 156.2 -1.6 -15.4 -2.8 44 140 A M E - D 0 57A 68 -2,-0.3 -9,-2.4 13,-0.2 -8,-1.1 -0.892 30.3-179.9-106.8 119.4 -3.2 -17.5 -0.0 45 141 A L E -CD 34 56A 1 11,-1.8 11,-2.1 -2,-0.6 2,-0.5 -0.849 23.3-130.5-116.3 154.0 -6.6 -16.3 1.3 46 142 A L E -CD 33 55A 28 -13,-1.1 -13,-0.7 -2,-0.3 2,-0.7 -0.887 14.8-153.7-106.0 125.0 -8.7 -17.9 4.0 47 143 A L E -CD 32 54A 4 7,-2.4 7,-2.6 -2,-0.5 2,-0.4 -0.839 10.0-146.9 -99.2 116.7 -12.4 -18.5 3.2 48 144 A N E - D 0 53A 85 -17,-0.9 2,-0.4 -2,-0.7 5,-0.2 -0.664 17.5-170.2 -82.7 129.2 -14.6 -18.4 6.3 49 145 A L - 0 0 55 3,-1.1 -2,-0.0 -2,-0.4 -19,-0.0 -0.940 34.1-123.0-121.1 142.1 -17.6 -20.9 6.1 50 146 A I S S+ 0 0 166 -2,-0.4 3,-0.1 1,-0.2 -1,-0.1 0.844 117.9 46.5 -49.9 -30.6 -20.6 -21.1 8.5 51 147 A N S S- 0 0 148 1,-0.3 2,-0.3 -3,-0.0 -1,-0.2 0.937 133.0 -39.5 -79.2 -47.7 -19.5 -24.7 8.9 52 148 A K - 0 0 155 2,-0.0 -3,-1.1 0, 0.0 2,-0.4 -0.987 64.1 -85.7-168.8 168.1 -15.8 -24.1 9.4 53 149 A E E -D 48 0A 121 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.683 42.4-168.9 -87.5 137.3 -12.9 -22.0 8.2 54 150 A I E -D 47 0A 53 -7,-2.6 -7,-2.4 -2,-0.4 2,-0.5 -0.941 13.8-140.9-126.3 149.2 -11.0 -23.3 5.1 55 151 A K E +D 46 0A 149 -2,-0.3 2,-0.4 -9,-0.2 -9,-0.2 -0.910 25.8 168.7-110.5 131.5 -7.7 -22.2 3.5 56 152 A H E -D 45 0A 96 -11,-2.1 -11,-1.8 -2,-0.5 2,-0.6 -0.999 32.5-126.9-142.4 140.6 -7.3 -22.0 -0.3 57 153 A S E +D 44 0A 70 -2,-0.4 2,-0.3 -13,-0.2 -13,-0.2 -0.744 34.3 177.9 -88.5 122.0 -4.7 -20.5 -2.6 58 154 A V E -D 43 0A 13 -15,-1.8 -15,-1.9 -2,-0.6 2,-0.1 -0.925 30.1-111.8-124.1 150.0 -6.2 -18.2 -5.1 59 155 A K E >> -D 42 0A 98 -2,-0.3 4,-1.3 -17,-0.2 3,-0.9 -0.465 27.5-118.5 -76.6 150.5 -4.5 -16.0 -7.8 60 156 A N T 34 S+ 0 0 45 -19,-1.6 -1,-0.1 1,-0.3 -18,-0.1 0.799 118.6 53.9 -59.7 -23.5 -4.5 -12.3 -7.4 61 157 A T T 34 S+ 0 0 105 -20,-0.3 -1,-0.3 1,-0.2 -38,-0.1 0.785 101.7 57.2 -81.6 -26.0 -6.5 -12.2 -10.7 62 158 A E T <4 S+ 0 0 72 -3,-0.9 -38,-1.2 -39,-0.1 -39,-0.9 0.793 121.3 20.0 -75.0 -24.8 -9.1 -14.7 -9.4 63 159 A F E < S-B 22 0A 4 -4,-1.3 2,-0.3 -41,-0.2 -41,-0.2 -0.871 72.0-142.7-136.4 170.8 -9.9 -12.3 -6.5 64 160 A R E -B 21 0A 161 -43,-2.9 -43,-2.5 -2,-0.3 2,-0.2 -0.930 24.5-105.0-134.2 159.6 -9.4 -8.6 -5.6 65 161 A K E B 20 0A 99 -2,-0.3 -45,-0.2 -45,-0.2 -46,-0.0 -0.580 360.0 360.0 -83.6 146.8 -8.6 -6.6 -2.5 66 162 A L 0 0 136 -47,-1.2 -1,-0.1 -2,-0.2 -47,-0.0 -0.291 360.0 360.0 -52.0 360.0 -11.4 -4.7 -0.7