==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-APR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/DNA 21-OCT-11 2LKX . COMPND 2 MOLECULE: PITUITARY HOMEOBOX 3; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.M.BAIRD-TITUS,T.DOERDELMANN,B.A.CHANEY,K.CLARK-BALDWIN,V.D . 68 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6298.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 61.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 33 48.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -2 A G 0 0 137 0, 0.0 4,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 176.4 38.4 27.9 46.6 2 -1 A S + 0 0 127 2,-0.2 0, 0.0 0, 0.0 0, 0.0 0.627 360.0 52.2-123.3 -28.7 37.0 24.7 48.3 3 1 A Q S S- 0 0 143 1,-0.4 2,-0.1 0, 0.0 0, 0.0 0.093 89.9-138.2-104.6 17.4 34.8 22.8 45.7 4 2 A R - 0 0 238 2,-0.0 -1,-0.4 1,-0.0 2,-0.3 -0.385 54.8 -41.0 50.9-127.6 37.4 22.6 42.8 5 3 A R - 0 0 238 1,-0.1 -1,-0.0 -2,-0.1 0, 0.0 -0.985 39.9-159.9-133.5 139.0 35.6 23.2 39.5 6 4 A Q - 0 0 161 -2,-0.3 -1,-0.1 2,-0.0 3,-0.0 0.966 32.3-174.6 -79.2 -57.7 32.1 22.0 38.3 7 5 A R - 0 0 197 1,-0.1 -2,-0.0 2,-0.0 0, 0.0 0.658 33.0 -11.1 65.6 138.2 32.5 22.5 34.5 8 6 A T + 0 0 82 1,-0.1 -1,-0.1 0, 0.0 -2,-0.0 0.128 55.3 128.3 52.5-156.0 29.9 22.1 31.6 9 7 A H + 0 0 183 1,-0.2 2,-0.4 -3,-0.0 -1,-0.1 0.757 35.6 160.8 60.9 33.2 26.4 20.6 31.6 10 8 A F - 0 0 86 2,-0.0 -1,-0.2 1,-0.0 2,-0.2 -0.667 37.7-128.3 -67.3 132.7 24.8 23.6 29.9 11 9 A T >> - 0 0 79 -2,-0.4 4,-1.5 1,-0.1 3,-1.0 -0.538 16.4-114.9 -81.6 151.6 21.4 22.5 28.4 12 10 A S H 3> S+ 0 0 92 1,-0.3 4,-2.0 2,-0.2 -1,-0.1 0.810 115.0 63.7 -58.4 -29.3 20.7 23.3 24.7 13 11 A Q H 3> S+ 0 0 124 2,-0.2 4,-0.7 1,-0.2 -1,-0.3 0.885 101.9 49.9 -61.6 -38.0 17.8 25.7 25.8 14 12 A Q H X> S+ 0 0 28 -3,-1.0 4,-2.6 1,-0.2 3,-1.3 0.949 109.8 50.5 -64.4 -46.2 20.4 27.9 27.6 15 13 A L H 3X S+ 0 0 62 -4,-1.5 4,-2.9 1,-0.3 5,-0.4 0.865 102.3 61.9 -60.1 -36.9 22.5 28.0 24.4 16 14 A Q H 3< S+ 0 0 115 -4,-2.0 -1,-0.3 1,-0.2 4,-0.2 0.663 113.9 34.3 -67.7 -19.2 19.4 29.0 22.3 17 15 A E H X S+ 0 0 11 -4,-1.0 4,-2.4 -3,-0.3 3,-2.0 0.859 108.4 58.1 -87.5 -41.7 21.9 37.3 22.4 22 20 A F H 3< S+ 0 0 35 -4,-2.6 -2,-0.2 1,-0.3 -3,-0.2 0.749 100.4 59.0 -62.3 -24.0 25.6 37.0 21.3 23 21 A Q T 3< S+ 0 0 131 -4,-1.8 -1,-0.3 1,-0.1 -2,-0.1 0.575 118.9 29.2 -78.9 -10.0 24.5 37.7 17.6 24 22 A R T <4 S+ 0 0 164 -3,-2.0 2,-0.2 1,-0.2 -2,-0.2 0.571 133.8 22.2-121.0 -21.9 23.1 41.2 18.7 25 23 A N < + 0 0 61 -4,-2.4 -1,-0.2 1,-0.1 -2,-0.1 -0.819 50.6 175.0-152.8 106.0 25.3 42.1 21.8 26 24 A R S S+ 0 0 70 -2,-0.2 29,-0.1 1,-0.2 -4,-0.1 0.604 85.1 42.4 -82.1 -14.6 28.8 40.7 22.4 27 25 A Y S S- 0 0 159 -5,-0.0 -1,-0.2 2,-0.0 2,-0.2 -0.512 77.3-179.7-135.4 61.4 29.4 42.9 25.5 28 26 A P - 0 0 7 0, 0.0 2,-0.1 0, 0.0 23,-0.0 -0.443 24.6-124.3 -69.7 139.2 26.3 43.1 27.7 29 27 A D >> - 0 0 85 -2,-0.2 4,-2.6 1,-0.1 3,-1.8 -0.306 32.3-102.1 -67.4 156.9 26.2 45.1 31.0 30 28 A M H 3> S+ 0 0 114 1,-0.3 4,-2.5 2,-0.2 5,-0.2 0.853 122.5 64.3 -54.5 -34.5 25.2 43.4 34.4 31 29 A S H 34 S+ 0 0 62 1,-0.2 4,-0.3 2,-0.2 -1,-0.3 0.764 113.3 34.0 -59.1 -27.7 21.7 45.0 34.0 32 30 A T H <> S+ 0 0 46 -3,-1.8 4,-2.3 2,-0.2 3,-0.3 0.788 112.0 60.2 -94.5 -38.3 21.3 42.8 30.9 33 31 A R H X S+ 0 0 38 -4,-2.6 4,-1.4 1,-0.2 -2,-0.2 0.854 104.4 51.8 -62.8 -31.8 23.4 39.7 32.1 34 32 A E H X S+ 0 0 122 -4,-2.5 4,-1.6 -5,-0.2 -1,-0.2 0.830 107.5 52.5 -71.8 -28.9 20.9 39.4 35.1 35 33 A E H > S+ 0 0 100 -3,-0.3 4,-2.1 -4,-0.3 3,-0.3 0.956 107.2 51.2 -68.3 -46.7 17.9 39.4 32.6 36 34 A I H X S+ 0 0 6 -4,-2.3 4,-0.6 1,-0.2 6,-0.2 0.873 109.4 52.8 -54.9 -37.7 19.6 36.5 30.5 37 35 A A H >X>S+ 0 0 5 -4,-1.4 5,-1.4 -5,-0.2 4,-1.3 0.870 105.5 53.1 -68.0 -35.8 19.9 34.7 33.9 38 36 A V H 3<5S+ 0 0 91 -4,-1.6 3,-0.4 -3,-0.3 -2,-0.2 0.936 107.9 51.2 -61.5 -45.2 16.1 35.2 34.6 39 37 A W H 3<5S+ 0 0 150 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.632 122.3 31.2 -68.8 -16.2 15.2 33.6 31.2 40 38 A T H <<5S- 0 0 13 -4,-0.6 -1,-0.2 -3,-0.5 -2,-0.2 0.475 106.7-116.0-116.0 -10.6 17.5 30.5 31.9 41 39 A N T <5S+ 0 0 153 -4,-1.3 -3,-0.2 -3,-0.4 -4,-0.1 0.679 78.2 121.8 60.7 28.8 17.2 30.2 35.7 42 40 A L < - 0 0 41 -5,-1.4 2,-0.3 -6,-0.2 -1,-0.2 -0.141 62.3-112.7 -87.8-168.2 20.9 31.0 36.0 43 41 A T >> - 0 0 75 -2,-0.1 4,-1.4 -3,-0.1 3,-1.1 -0.903 32.4 -99.2-130.5 159.1 22.7 33.8 37.9 44 42 A E H 3> S+ 0 0 47 -2,-0.3 4,-2.6 1,-0.3 5,-0.1 0.836 119.3 53.9 -54.6 -42.1 24.7 36.8 36.4 45 43 A A H 3> S+ 0 0 48 2,-0.2 4,-2.8 1,-0.2 -1,-0.3 0.854 104.9 55.8 -62.3 -33.5 28.2 35.3 37.0 46 44 A R H <> S+ 0 0 146 -3,-1.1 4,-1.7 2,-0.2 -1,-0.2 0.913 110.8 44.7 -65.8 -40.6 27.2 32.1 35.0 47 45 A V H X S+ 0 0 0 -4,-1.4 4,-2.7 2,-0.2 -2,-0.2 0.928 113.5 51.5 -65.2 -44.9 26.2 34.3 32.0 48 46 A R H X S+ 0 0 119 -4,-2.6 4,-2.7 2,-0.2 5,-0.3 0.912 110.0 46.9 -62.4 -45.8 29.5 36.4 32.5 49 47 A V H X S+ 0 0 72 -4,-2.8 4,-2.0 2,-0.2 -1,-0.2 0.877 113.4 50.4 -67.7 -33.1 31.8 33.3 32.5 50 48 A W H X S+ 0 0 13 -4,-1.7 4,-2.3 -5,-0.2 -2,-0.2 0.950 112.3 47.6 -63.0 -47.2 29.9 31.9 29.4 51 49 A F H X S+ 0 0 2 -4,-2.7 4,-2.1 2,-0.2 -2,-0.2 0.915 113.4 45.0 -65.4 -45.3 30.3 35.3 27.6 52 50 A K H X S+ 0 0 131 -4,-2.7 4,-2.9 1,-0.2 -1,-0.2 0.912 114.5 49.8 -68.5 -35.0 34.1 35.7 28.4 53 51 A N H X S+ 0 0 63 -4,-2.0 4,-2.8 -5,-0.3 5,-0.3 0.886 107.9 55.3 -65.4 -34.2 34.6 32.1 27.4 54 52 A R H X S+ 0 0 72 -4,-2.3 4,-1.6 2,-0.2 -2,-0.2 0.921 113.6 39.7 -63.8 -42.9 32.6 32.8 24.1 55 53 A R H X S+ 0 0 58 -4,-2.1 4,-2.5 2,-0.2 -2,-0.2 0.944 117.4 49.8 -71.1 -42.2 35.0 35.7 23.2 56 54 A A H X S+ 0 0 37 -4,-2.9 4,-3.0 2,-0.2 -2,-0.2 0.860 114.5 43.9 -63.3 -37.7 38.1 33.7 24.4 57 55 A K H < S+ 0 0 90 -4,-2.8 -1,-0.2 2,-0.2 -2,-0.2 0.694 107.7 58.2 -92.7 -12.9 37.1 30.5 22.4 58 56 A W H >X>S+ 0 0 45 -4,-1.6 4,-2.8 -5,-0.3 3,-1.5 0.980 115.3 38.3 -55.7 -58.9 36.2 32.7 19.4 59 57 A R H 3X5S+ 0 0 111 -4,-2.5 4,-1.5 1,-0.3 -2,-0.2 0.931 113.3 54.4 -62.6 -44.8 39.9 33.8 19.7 60 58 A K H 3<5S+ 0 0 158 -4,-3.0 -1,-0.3 1,-0.2 -3,-0.2 0.353 122.6 29.9 -75.9 7.8 41.3 30.3 20.6 61 59 A R H <45S+ 0 0 213 -3,-1.5 -1,-0.2 -4,-0.1 -2,-0.2 0.546 143.8 6.8-125.9 -30.6 39.7 28.8 17.5 62 60 A E H ><5S- 0 0 93 -4,-2.8 2,-2.8 -5,-0.1 3,-1.7 0.548 70.6-161.9-132.1 -19.7 39.7 31.7 14.9 63 61 A E T 3<