==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-MAR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 29-MAR-12 2LRF . COMPND 2 MOLECULE: ANTI-LIPOPOLYSACCHARIDE FACTOR; . SOURCE 2 SYNTHETIC: YES; . AUTHOR K.V.R.REDDY,S.SHARMA,R.YEDERY,R.P.BARNWAL . 24 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2853.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 4 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A T 0 0 180 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 156.9 2.1 0.0 -1.2 2 2 A a + 0 0 46 2,-0.0 2,-0.4 19,-0.0 21,-0.2 -0.669 360.0 178.7-175.8 115.4 4.6 -2.5 -2.5 3 3 A H + 0 0 139 -2,-0.2 2,-0.3 18,-0.1 18,-0.1 -0.987 17.6 142.7-127.9 131.0 6.7 -2.6 -5.7 4 4 A I - 0 0 89 -2,-0.4 18,-0.2 16,-0.1 3,-0.1 -0.909 51.3-118.4-152.3 177.8 9.3 -5.2 -6.7 5 5 A R S S+ 0 0 206 -2,-0.3 2,-0.8 1,-0.2 -1,-0.1 0.834 98.1 62.4 -91.9 -40.1 10.7 -7.2 -9.6 6 6 A R S S- 0 0 204 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.799 72.2-172.1 -93.6 109.9 9.7 -10.7 -8.5 7 7 A K - 0 0 72 -2,-0.8 16,-0.1 1,-0.1 4,-0.1 -0.607 25.2 -99.1 -99.1 160.7 6.0 -11.1 -8.3 8 8 A P - 0 0 62 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 -0.105 46.1 -88.7 -69.8 171.9 3.9 -14.0 -6.8 9 9 A K S S- 0 0 192 1,-0.1 2,-0.3 0, 0.0 -2,-0.0 0.802 106.0 -18.8 -51.9 -30.1 2.3 -16.7 -8.9 10 10 A F - 0 0 125 12,-0.0 2,-0.4 0, 0.0 -1,-0.1 -0.962 64.9-113.9-165.0 176.4 -0.7 -14.4 -9.1 11 11 A R - 0 0 44 -2,-0.3 4,-0.1 2,-0.2 12,-0.0 -0.989 10.8-144.6-131.0 126.8 -2.5 -11.4 -7.5 12 12 A K S S+ 0 0 173 -2,-0.4 -1,-0.1 2,-0.1 3,-0.1 0.881 86.8 70.8 -52.4 -41.3 -5.8 -11.4 -5.8 13 13 A F S S- 0 0 148 1,-0.1 2,-0.4 -3,-0.1 -2,-0.2 -0.000 102.5 -82.7 -67.8 179.7 -6.5 -7.9 -7.2 14 14 A K - 0 0 180 1,-0.0 2,-1.0 0, 0.0 -1,-0.1 -0.750 33.7-136.2 -92.0 132.2 -7.3 -7.3 -10.9 15 15 A L + 0 0 100 -2,-0.4 2,-0.1 -4,-0.1 7,-0.1 -0.753 34.9 171.7 -90.7 100.9 -4.3 -7.0 -13.3 16 16 A Y - 0 0 132 -2,-1.0 2,-1.3 1,-0.1 0, 0.0 -0.276 51.8 -52.2 -97.1-174.4 -5.0 -4.0 -15.6 17 17 A H S S+ 0 0 188 -2,-0.1 2,-0.3 0, 0.0 -1,-0.1 -0.436 90.9 122.5 -63.5 93.5 -2.9 -2.2 -18.2 18 18 A E - 0 0 111 -2,-1.3 3,-0.1 1,-0.2 -3,-0.0 -0.965 61.8-122.8-150.6 164.3 0.2 -1.5 -16.0 19 19 A G S S- 0 0 60 -2,-0.3 2,-0.3 1,-0.1 -1,-0.2 0.951 81.3 -31.4 -73.3 -89.1 3.9 -2.1 -16.0 20 20 A K S S+ 0 0 143 1,-0.1 -1,-0.1 -13,-0.0 -16,-0.1 -0.782 85.3 118.5-141.9 94.4 4.9 -3.9 -12.8 21 21 A F + 0 0 91 -2,-0.3 2,-0.6 -18,-0.1 -1,-0.1 -0.279 28.0 127.9-153.1 56.9 2.9 -3.2 -9.6 22 22 A W + 0 0 36 -18,-0.2 -19,-0.1 -7,-0.1 -12,-0.0 -0.799 19.7 145.4-120.6 88.8 1.3 -6.5 -8.4 23 23 A a 0 0 36 -2,-0.6 -12,-0.1 -21,-0.2 -16,-0.0 -0.873 360.0 360.0-129.2 99.5 2.1 -7.1 -4.7 24 24 A P 0 0 96 0, 0.0 -1,-0.1 0, 0.0 -13,-0.0 0.428 360.0 360.0 -69.8 360.0 -0.7 -8.7 -2.7