==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-JUL-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 11-APR-12 2LRQ . COMPND 2 MOLECULE: NUA4 COMPLEX SUBUNIT EAF3 HOMOLOG; . SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; . AUTHOR H.LEE,D.LEE,E.KOHAN,H.JANJUA,R.XIAO,T.ACTON,J.K.EVERETT,G.MO . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7211.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 48 56.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 24.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 230 0, 0.0 2,-0.3 0, 0.0 7,-0.1 0.000 360.0 360.0 360.0 91.8 -21.6 -12.6 -3.1 2 2 A N - 0 0 96 5,-0.1 2,-0.1 6,-0.0 5,-0.1 -0.899 360.0-114.6-163.5 130.8 -18.4 -14.6 -2.4 3 3 A Y > - 0 0 172 -2,-0.3 3,-0.8 3,-0.2 5,-0.0 -0.428 20.1-134.4 -68.5 137.3 -15.1 -15.1 -4.3 4 4 A S T 3 S+ 0 0 129 1,-0.2 -1,-0.1 -2,-0.1 3,-0.1 0.702 101.1 73.1 -64.3 -18.8 -14.5 -18.6 -5.6 5 5 A T T 3 S- 0 0 140 1,-0.2 2,-0.3 2,-0.0 -1,-0.2 0.914 116.3 -64.3 -62.4 -45.0 -10.9 -18.2 -4.2 6 6 A G S < S- 0 0 35 -3,-0.8 -3,-0.2 3,-0.0 -1,-0.2 -0.970 80.2 -23.2 178.8-169.4 -12.1 -18.6 -0.6 7 7 A T S S- 0 0 130 -2,-0.3 2,-0.6 1,-0.1 -5,-0.1 -0.362 71.1-104.9 -62.2 134.7 -14.3 -17.1 2.2 8 8 A D - 0 0 83 -7,-0.1 -1,-0.1 -2,-0.1 2,-0.0 -0.479 38.1-135.0 -65.8 110.5 -14.8 -13.3 1.8 9 9 A A - 0 0 46 -2,-0.6 -1,-0.1 1,-0.1 -3,-0.0 -0.326 8.4-128.5 -66.2 147.6 -12.5 -11.6 4.4 10 10 A N S S+ 0 0 128 27,-0.2 -1,-0.1 2,-0.0 -2,-0.0 0.895 88.7 82.6 -63.8 -40.9 -14.0 -8.8 6.5 11 11 A T S S- 0 0 14 1,-0.1 -2,-0.1 2,-0.1 29,-0.0 -0.292 83.1-131.7 -65.2 149.6 -11.0 -6.5 5.6 12 12 A L S S+ 0 0 147 2,-0.0 2,-0.3 54,-0.0 -1,-0.1 0.528 89.9 69.0 -79.6 -6.0 -11.2 -4.7 2.2 13 13 A F - 0 0 19 53,-0.0 2,-0.3 4,-0.0 -2,-0.1 -0.884 64.4-167.6-116.7 147.1 -7.6 -5.8 1.5 14 14 A V > - 0 0 72 -2,-0.3 3,-1.5 20,-0.0 18,-0.2 -0.903 33.6 -85.4-131.2 158.7 -6.3 -9.4 0.8 15 15 A D T 3 S+ 0 0 111 -2,-0.3 18,-0.2 1,-0.2 19,-0.1 -0.323 111.9 25.7 -64.1 141.2 -2.9 -11.1 0.7 16 16 A G T 3 S+ 0 0 59 16,-2.3 -1,-0.2 1,-0.3 17,-0.1 0.302 91.0 135.5 87.6 -8.2 -1.0 -10.8 -2.7 17 17 A E < - 0 0 57 -3,-1.5 15,-2.4 15,-0.2 2,-0.5 -0.419 54.4-128.3 -73.2 146.2 -2.9 -7.6 -3.5 18 18 A R E +A 31 0A 138 13,-0.2 49,-0.4 -2,-0.1 2,-0.3 -0.826 37.2 164.6 -97.9 128.3 -0.9 -4.7 -5.0 19 19 A V E -A 30 0A 0 11,-1.4 11,-2.3 -2,-0.5 2,-0.4 -0.845 34.3-107.2-136.5 172.3 -1.4 -1.3 -3.2 20 20 A L E -AB 29 65A 1 45,-1.6 45,-1.2 -2,-0.3 2,-0.5 -0.840 21.0-156.5-107.2 141.3 0.1 2.2 -3.1 21 21 A C E -AB 28 64A 11 7,-2.9 7,-1.4 -2,-0.4 2,-0.3 -0.948 11.9-172.9-121.4 112.8 2.1 3.5 -0.1 22 22 A F E +A 27 0A 73 41,-0.5 5,-0.2 -2,-0.5 -2,-0.0 -0.709 21.9 154.7-103.2 153.8 2.4 7.3 0.4 23 23 A H + 0 0 143 3,-0.9 4,-0.1 -2,-0.3 -1,-0.1 0.129 69.2 3.5-165.3 26.7 4.6 9.2 3.0 24 24 A G S S- 0 0 49 2,-0.4 -1,-0.1 0, 0.0 -2,-0.0 -0.920 111.3 -39.7 177.3-154.5 5.2 12.6 1.5 25 25 A P S S+ 0 0 120 0, 0.0 2,-0.3 0, 0.0 -3,-0.0 0.437 119.7 58.0 -77.3 4.3 4.4 14.9 -1.6 26 26 A L S S- 0 0 45 56,-0.0 -3,-0.9 53,-0.0 2,-0.4 -0.961 78.3-128.1-135.2 152.5 4.6 11.8 -3.8 27 27 A I E -A 22 0A 24 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.844 24.3-163.6-102.3 132.0 3.0 8.3 -4.0 28 28 A Y E -A 21 0A 121 -7,-1.4 -7,-2.9 -2,-0.4 2,-0.2 -0.814 21.5-109.5-114.9 154.3 5.1 5.1 -4.2 29 29 A E E +A 20 0A 75 -2,-0.3 20,-0.7 -9,-0.2 2,-0.3 -0.576 42.6 161.5 -84.3 144.8 4.2 1.6 -5.2 30 30 A A E -AC 19 48A 1 -11,-2.3 -11,-1.4 -2,-0.2 2,-0.3 -0.915 25.9-133.1-151.8 173.2 4.0 -1.2 -2.6 31 31 A K E -AC 18 47A 87 16,-1.6 16,-1.7 -2,-0.3 2,-0.8 -0.998 16.6-125.9-139.9 142.1 2.6 -4.8 -2.1 32 32 A V E - C 0 46A 1 -15,-2.4 -16,-2.3 -2,-0.3 14,-0.2 -0.762 21.9-178.0 -87.9 110.9 0.6 -6.5 0.7 33 33 A L E - 0 0 76 12,-1.0 2,-0.3 -2,-0.8 -1,-0.2 0.861 68.3 -20.7 -76.1 -37.0 2.5 -9.7 1.7 34 34 A K E - C 0 45A 109 11,-1.1 11,-2.0 -19,-0.1 2,-0.3 -0.981 58.0-148.0-165.4 164.0 -0.2 -10.7 4.3 35 35 A T E - C 0 44A 36 -2,-0.3 9,-0.2 9,-0.2 -20,-0.1 -0.979 14.4-137.0-141.5 152.9 -3.0 -9.3 6.5 36 36 A K + 0 0 109 7,-1.1 3,-0.5 -2,-0.3 7,-0.1 -0.769 27.5 165.5-111.1 86.2 -4.5 -10.1 9.9 37 37 A P + 0 0 50 0, 0.0 -27,-0.2 0, 0.0 -1,-0.1 0.354 51.4 103.3 -82.1 8.3 -8.4 -9.9 9.5 38 38 A D S S+ 0 0 140 -28,-0.0 2,-0.3 -3,-0.0 -2,-0.0 0.359 88.3 30.4 -71.5 8.3 -8.8 -11.7 12.9 39 39 A A S S- 0 0 43 -3,-0.5 -3,-0.0 4,-0.1 -1,-0.0 -0.989 81.2-112.4-162.7 157.2 -9.7 -8.2 14.3 40 40 A T S S+ 0 0 110 -2,-0.3 2,-0.2 -29,-0.0 -2,-0.0 -0.921 102.4 21.2-143.4 113.6 -11.3 -4.8 13.4 41 41 A P S S+ 0 0 105 0, 0.0 2,-0.3 0, 0.0 -30,-0.0 0.573 97.1 148.7 -70.4-179.0 -9.5 -2.4 13.3 42 42 A V - 0 0 25 -2,-0.2 19,-0.8 17,-0.0 2,-0.2 -0.966 43.0 -88.0-167.4 176.7 -6.1 -4.1 12.8 43 43 A E E - D 0 60A 46 -2,-0.3 -7,-1.1 17,-0.2 2,-0.3 -0.562 31.1-148.5 -96.6 162.6 -2.6 -3.9 11.3 44 44 A Y E -CD 35 59A 6 15,-1.2 15,-2.0 -2,-0.2 2,-0.6 -0.979 13.7-125.2-134.5 145.8 -1.4 -5.0 7.8 45 45 A Y E +CD 34 58A 15 -11,-2.0 -11,-1.1 -2,-0.3 -12,-1.0 -0.815 41.2 157.1 -95.9 118.5 1.9 -6.3 6.5 46 46 A I E -CD 32 57A 11 11,-1.2 11,-1.0 -2,-0.6 2,-0.3 -0.986 17.7-173.4-141.2 149.4 3.3 -4.3 3.6 47 47 A H E -C 31 0A 23 -16,-1.7 -16,-1.6 -2,-0.3 2,-0.2 -0.995 34.0-102.1-142.7 146.0 6.8 -3.8 2.1 48 48 A Y E > -C 30 0A 75 -2,-0.3 3,-1.0 4,-0.2 -18,-0.2 -0.483 42.7-115.0 -71.0 131.8 8.2 -1.5 -0.7 49 49 A A T 3 S+ 0 0 49 -20,-0.7 3,-0.1 1,-0.2 -20,-0.1 -0.392 98.1 27.6 -68.1 141.7 8.7 -3.3 -4.0 50 50 A G T 3 S+ 0 0 79 1,-0.3 2,-0.3 -2,-0.1 -1,-0.2 0.635 110.2 88.7 81.6 15.6 12.3 -3.6 -5.3 51 51 A W S < S- 0 0 202 -3,-1.0 -1,-0.3 -4,-0.0 2,-0.1 -0.900 90.7 -71.2-139.1 166.5 13.7 -3.5 -1.7 52 52 A S > - 0 0 71 -2,-0.3 3,-0.8 1,-0.1 -4,-0.2 -0.360 31.0-152.1 -60.9 132.5 14.4 -5.9 1.2 53 53 A K G > S+ 0 0 123 1,-0.2 3,-1.4 2,-0.1 -1,-0.1 0.533 84.3 85.4 -82.5 -8.7 11.3 -7.4 2.8 54 54 A N G 3 S+ 0 0 134 1,-0.3 -1,-0.2 2,-0.1 -2,-0.1 0.599 71.0 78.8 -68.8 -9.6 13.1 -7.8 6.1 55 55 A W G < S- 0 0 185 -3,-0.8 -1,-0.3 -7,-0.1 -2,-0.1 0.803 82.1-161.2 -68.0 -29.4 12.2 -4.1 6.8 56 56 A D < - 0 0 73 -3,-1.4 2,-1.2 1,-0.2 -9,-0.1 0.942 2.0-161.1 44.6 74.0 8.7 -5.4 7.8 57 57 A E E -D 46 0A 62 -11,-1.0 -11,-1.2 -4,-0.1 2,-0.4 -0.682 6.7-167.4 -87.8 94.8 6.7 -2.1 7.4 58 58 A W E +D 45 0A 134 -2,-1.2 -13,-0.2 -13,-0.2 -15,-0.0 -0.674 15.1 168.0 -83.4 128.4 3.5 -2.7 9.5 59 59 A V E -D 44 0A 9 -15,-2.0 -15,-1.2 -2,-0.4 2,-0.1 -0.995 33.2-110.1-143.0 149.2 0.8 -0.0 8.8 60 60 A P E > -D 43 0A 64 0, 0.0 3,-1.9 0, 0.0 4,-0.5 -0.357 39.6-102.9 -76.0 156.8 -3.0 0.5 9.6 61 61 A E G > S+ 0 0 85 -19,-0.8 3,-0.8 1,-0.3 -18,-0.1 0.727 117.9 72.8 -50.3 -21.2 -5.7 0.4 6.9 62 62 A N G 3 S+ 0 0 138 1,-0.2 -1,-0.3 3,-0.0 -3,-0.0 0.889 98.4 42.6 -63.9 -40.9 -5.7 4.2 7.2 63 63 A R G < S+ 0 0 83 -3,-1.9 -41,-0.5 2,-0.0 2,-0.4 0.406 99.5 95.4 -86.8 2.9 -2.2 4.6 5.5 64 64 A V E < -B 21 0A 17 -3,-0.8 2,-0.4 -4,-0.5 -43,-0.1 -0.809 56.9-165.9 -99.5 131.8 -3.3 2.0 2.8 65 65 A L E -B 20 0A 50 -45,-1.2 -45,-1.6 -2,-0.4 -3,-0.0 -0.955 22.8-116.2-119.8 134.6 -4.8 3.2 -0.5 66 66 A K - 0 0 134 -2,-0.4 2,-0.6 -47,-0.2 -47,-0.1 -0.330 32.0-111.9 -66.1 146.2 -6.6 1.0 -3.1 67 67 A Y + 0 0 103 -49,-0.4 2,-0.3 4,-0.1 -1,-0.1 -0.704 55.1 146.3 -84.2 119.4 -5.0 0.5 -6.5 68 68 A N >> - 0 0 71 -2,-0.6 4,-2.4 1,-0.1 3,-0.8 -0.993 62.3-111.5-154.3 146.8 -7.1 2.2 -9.2 69 69 A D H 3> S+ 0 0 127 -2,-0.3 4,-2.1 1,-0.3 5,-0.1 0.767 119.7 56.8 -48.1 -27.8 -6.5 4.1 -12.5 70 70 A D H 3> S+ 0 0 91 2,-0.2 4,-1.9 1,-0.2 -1,-0.3 0.917 106.6 45.6 -71.9 -45.3 -7.7 7.2 -10.6 71 71 A N H <> S+ 0 0 13 -3,-0.8 4,-1.7 2,-0.2 -2,-0.2 0.875 114.3 50.3 -65.7 -36.2 -5.0 6.9 -7.9 72 72 A V H X S+ 0 0 32 -4,-2.4 4,-2.8 2,-0.2 -2,-0.2 0.927 106.4 55.2 -65.7 -44.0 -2.5 6.2 -10.6 73 73 A K H X S+ 0 0 103 -4,-2.1 4,-2.5 -5,-0.3 -2,-0.2 0.893 106.8 50.9 -55.4 -42.2 -3.7 9.3 -12.5 74 74 A R H X S+ 0 0 128 -4,-1.9 4,-2.9 2,-0.2 -1,-0.2 0.898 111.3 47.1 -63.9 -40.4 -3.1 11.4 -9.3 75 75 A R H X S+ 0 0 58 -4,-1.7 4,-2.8 2,-0.2 -2,-0.2 0.875 111.9 51.3 -68.0 -37.4 0.5 10.0 -9.1 76 76 A Q H X S+ 0 0 107 -4,-2.8 4,-2.4 2,-0.2 -2,-0.2 0.897 111.0 48.0 -66.2 -40.0 0.9 10.7 -12.8 77 77 A E H X S+ 0 0 91 -4,-2.5 4,-2.9 2,-0.2 -2,-0.2 0.964 115.1 44.2 -64.1 -51.4 -0.3 14.3 -12.1 78 78 A L H X S+ 0 0 47 -4,-2.9 4,-2.6 1,-0.2 -2,-0.2 0.879 112.2 54.4 -60.2 -39.2 2.1 14.7 -9.1 79 79 A A H X S+ 0 0 54 -4,-2.8 4,-1.5 2,-0.2 -1,-0.2 0.937 112.3 42.3 -62.0 -45.7 4.8 13.1 -11.3 80 80 A R H < S+ 0 0 196 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.903 114.8 51.3 -66.5 -41.3 4.3 15.6 -14.1 81 81 A Q H < S+ 0 0 152 -4,-2.9 -2,-0.2 1,-0.2 -1,-0.2 0.869 105.3 57.1 -63.7 -36.7 4.0 18.4 -11.5 82 82 A C H < S+ 0 0 72 -4,-2.6 -1,-0.2 -5,-0.2 -2,-0.2 0.900 92.2 84.2 -61.9 -41.8 7.3 17.3 -9.9 83 83 A G < + 0 0 52 -4,-1.5 2,-0.3 -5,-0.1 0, 0.0 -0.326 58.7 146.6 -64.4 142.9 9.2 17.7 -13.2 84 84 A E 0 0 175 1,-0.1 -2,-0.0 -2,-0.0 -3,-0.0 -0.979 360.0 360.0-168.4 167.9 10.4 21.2 -13.9 85 85 A R 0 0 311 -2,-0.3 -1,-0.1 0, 0.0 -2,-0.0 0.277 360.0 360.0-170.1 360.0 13.2 23.2 -15.6