==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIPOPOLYSACCHARIDE-BINDING PROTEIN 12-JAN-95 1LYP . COMPND 2 MOLECULE: CAP18; . SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; . AUTHOR C.CHEN,T.-H.HUANG . 32 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3854.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33103.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 28.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 75.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G > 0 0 91 0, 0.0 4,-1.5 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -31.5 24.9 11.9 -6.3 2 2 A L H > + 0 0 129 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.882 360.0 56.6 -58.1 -38.0 21.5 13.4 -5.6 3 3 A R H > S+ 0 0 164 1,-0.2 4,-2.7 2,-0.2 5,-0.3 0.985 101.7 52.4 -58.3 -61.0 20.4 10.1 -4.0 4 4 A K H > S+ 0 0 151 1,-0.3 4,-1.5 2,-0.2 -1,-0.2 0.848 113.7 46.8 -44.4 -38.3 23.2 10.0 -1.4 5 5 A R H X S+ 0 0 192 -4,-1.5 4,-1.6 2,-0.2 -1,-0.3 0.906 112.0 48.4 -74.2 -41.5 22.3 13.5 -0.4 6 6 A L H X S+ 0 0 87 -4,-2.5 4,-2.2 -3,-0.3 5,-0.3 0.961 110.1 51.0 -64.4 -50.6 18.5 12.9 -0.2 7 7 A R H X S+ 0 0 176 -4,-2.7 4,-0.6 1,-0.2 -2,-0.2 0.961 111.8 45.7 -51.5 -58.3 18.8 9.7 1.9 8 8 A K H >X S+ 0 0 131 -4,-1.5 4,-1.5 -5,-0.3 3,-0.7 0.848 109.4 60.0 -55.4 -32.7 21.0 11.3 4.5 9 9 A F H >X S+ 0 0 133 -4,-1.6 4,-1.8 1,-0.3 3,-1.0 0.983 101.7 48.3 -60.5 -58.8 18.7 14.3 4.5 10 10 A R H 3X S+ 0 0 200 -4,-2.2 4,-0.7 1,-0.3 -1,-0.3 0.603 109.8 59.0 -59.3 -6.5 15.6 12.3 5.6 11 11 A N H X S+ 0 0 92 -4,-1.8 4,-1.5 1,-0.3 3,-0.6 0.936 100.8 67.7 -57.7 -45.4 15.2 15.6 10.1 14 14 A K H 3X S+ 0 0 118 -4,-0.7 4,-1.5 -5,-0.3 -1,-0.3 0.810 97.3 56.0 -44.8 -32.8 14.0 12.3 11.4 15 15 A E H X S+ 0 0 101 -4,-1.5 4,-1.9 1,-0.2 3,-0.8 0.991 100.1 47.5 -70.6 -61.6 11.0 14.7 14.9 18 18 A K H 3< S+ 0 0 156 -4,-1.5 4,-0.2 1,-0.2 -1,-0.2 0.651 106.5 67.3 -55.5 -10.1 11.3 12.2 17.7 19 19 A K H >X S+ 0 0 128 -4,-0.7 3,-0.7 2,-0.2 4,-0.5 0.938 103.5 37.2 -78.3 -47.5 12.4 15.2 19.7 20 20 A I H XX S+ 0 0 93 -4,-1.2 4,-2.1 -3,-0.8 3,-1.3 0.860 106.5 67.3 -73.1 -32.7 9.1 17.2 19.7 21 21 A G H 3X S+ 0 0 34 -4,-1.9 4,-0.7 1,-0.3 -1,-0.2 0.713 101.3 51.9 -59.5 -16.0 7.1 14.0 20.1 22 22 A Q H <4 S+ 0 0 114 -3,-0.7 -1,-0.3 -4,-0.2 -2,-0.2 0.684 107.5 50.9 -92.9 -19.5 8.7 13.8 23.5 23 23 A K H X S+ 0 0 89 -4,-2.1 4,-2.7 1,-0.2 3,-0.6 0.873 101.2 63.6 -76.9 -35.8 4.0 17.1 23.6 25 25 A Q H 3< S+ 0 0 116 -4,-0.7 -1,-0.2 -5,-0.3 -2,-0.1 0.669 101.0 56.4 -62.6 -12.3 3.4 13.7 25.4 26 26 A G H 34 S+ 0 0 29 -3,-0.5 4,-0.3 -4,-0.2 -1,-0.2 0.833 112.6 36.9 -87.7 -34.8 4.3 15.6 28.6 27 27 A L H XX S+ 0 0 91 -4,-0.7 4,-2.7 -3,-0.6 3,-1.7 0.881 102.5 71.9 -84.2 -40.6 1.6 18.3 28.3 28 28 A L H 3X S+ 0 0 91 -4,-2.7 4,-1.9 1,-0.3 -3,-0.1 0.892 92.8 56.2 -40.8 -56.4 -1.2 16.2 26.8 29 29 A P H 34 S+ 0 0 95 0, 0.0 -1,-0.3 0, 0.0 -2,-0.1 0.825 115.4 40.0 -49.3 -32.7 -1.8 14.3 30.1 30 30 A K H <4 S+ 0 0 175 -3,-1.7 -2,-0.2 -4,-0.3 -3,-0.1 0.926 129.6 27.3 -83.6 -48.4 -2.4 17.7 31.7 31 31 A L H < 0 0 142 -4,-2.7 -3,-0.2 1,-0.2 -4,-0.0 0.969 360.0 360.0 -77.8 -57.3 -4.3 19.4 28.9 32 32 A A < 0 0 119 -4,-1.9 -2,-0.2 -5,-0.3 -1,-0.2 -0.646 360.0 360.0-148.5 360.0 -5.9 16.4 27.2