==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-MAY-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ONCOPROTEIN 21-JAN-13 2M3L . COMPND 2 MOLECULE: PROTEIN E6; . SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN PAPILLOMAVIRUS TYPE 51; . AUTHOR A.MISCHO,O.OHLENSCHLAGER,M.GORLACH . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5287.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 64.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 3.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 13.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 11.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 23.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 76 A G 0 0 70 0, 0.0 2,-1.7 0, 0.0 55,-0.1 0.000 360.0 360.0 360.0-128.8 -1.1 4.3 -17.9 2 77 A S + 0 0 136 53,-0.1 2,-0.3 51,-0.0 53,-0.1 -0.601 360.0 132.1 -79.7 85.3 -1.5 6.2 -14.7 3 78 A H - 0 0 84 -2,-1.7 51,-0.3 3,-0.0 2,-0.2 -0.853 40.9-143.8-129.7 170.2 0.6 3.9 -12.5 4 79 A M - 0 0 148 -2,-0.3 2,-0.4 49,-0.2 51,-0.2 -0.764 43.2 -58.0-135.0 172.3 3.4 4.5 -10.1 5 80 A S + 0 0 81 -2,-0.2 2,-0.4 48,-0.1 48,-0.2 -0.375 67.3 159.2 -59.0 105.9 6.7 3.0 -8.9 6 81 A R E -A 52 0A 90 46,-1.9 46,-3.1 -2,-0.4 2,-0.5 -0.989 29.7-152.5-133.5 140.0 5.7 -0.6 -7.8 7 82 A S E +A 51 0A 65 -2,-0.4 2,-0.2 44,-0.2 44,-0.2 -0.964 27.0 160.0-117.2 119.5 7.9 -3.7 -7.4 8 83 A V E -A 50 0A 23 42,-2.2 42,-3.1 -2,-0.5 2,-0.1 -0.786 36.3 -98.0-130.7 176.6 6.2 -7.1 -7.8 9 84 A Y >> - 0 0 52 -2,-0.2 4,-1.9 40,-0.2 3,-1.0 -0.468 35.6-105.8 -95.1 164.7 7.2 -10.7 -8.5 10 85 A G H 3> S+ 0 0 2 38,-0.3 4,-2.3 1,-0.3 3,-0.2 0.907 121.5 53.4 -54.9 -44.7 7.1 -12.6 -11.8 11 86 A T H 3> S+ 0 0 98 1,-0.3 4,-0.8 2,-0.2 -1,-0.3 0.736 107.2 53.2 -64.1 -22.1 4.1 -14.6 -10.8 12 87 A T H <> S+ 0 0 51 -3,-1.0 4,-3.3 2,-0.2 5,-0.3 0.858 106.5 52.1 -81.1 -36.2 2.4 -11.2 -10.0 13 88 A L H X>S+ 0 0 1 -4,-1.9 5,-1.6 1,-0.2 4,-0.9 0.933 101.2 61.3 -60.4 -47.8 3.2 -10.0 -13.6 14 89 A E H <5S+ 0 0 69 -4,-2.3 -1,-0.2 3,-0.2 -2,-0.2 0.846 117.6 30.3 -47.6 -40.1 1.6 -13.1 -15.1 15 90 A A H <5S+ 0 0 63 -4,-0.8 -2,-0.2 -5,-0.2 -1,-0.2 0.940 129.1 34.1 -87.2 -54.0 -1.6 -12.0 -13.5 16 91 A I H <5S+ 0 0 76 -4,-3.3 -3,-0.2 1,-0.2 -2,-0.1 0.990 129.7 33.7 -68.6 -58.7 -1.5 -8.2 -13.4 17 92 A T T <5S- 0 0 36 -4,-0.9 -3,-0.2 -5,-0.3 -1,-0.2 0.738 101.4-145.4 -71.2 -23.2 0.4 -7.6 -16.6 18 93 A K < + 0 0 151 -5,-1.6 2,-0.4 -6,-0.3 -4,-0.2 0.632 65.0 91.3 70.7 18.5 -1.5 -10.7 -17.9 19 94 A K S S- 0 0 98 -6,-0.6 -1,-0.2 4,-0.0 -2,-0.1 -0.990 80.9-101.6-140.4 147.6 1.4 -11.8 -20.0 20 95 A S >> - 0 0 64 -2,-0.4 4,-2.8 1,-0.1 3,-1.0 -0.323 30.5-111.4 -71.7 149.5 4.2 -14.1 -19.2 21 96 A L T 34 S+ 0 0 19 1,-0.3 5,-0.2 2,-0.2 -1,-0.1 0.834 114.6 57.8 -39.1 -51.5 7.7 -12.9 -18.4 22 97 A Y T 34 S+ 0 0 175 1,-0.2 -1,-0.3 3,-0.1 18,-0.1 0.861 115.2 34.4 -58.3 -39.1 9.2 -14.3 -21.6 23 98 A D T <4 S+ 0 0 81 -3,-1.0 -2,-0.2 2,-0.1 -1,-0.2 0.927 96.3 93.8 -83.2 -43.6 6.8 -12.2 -23.8 24 99 A L S < S- 0 0 22 -4,-2.8 2,-1.0 1,-0.1 -11,-0.0 -0.233 75.0-133.8 -65.3 119.3 6.6 -9.1 -21.7 25 100 A S + 0 0 77 -2,-0.1 2,-0.4 9,-0.1 32,-0.4 -0.653 33.1 171.9 -77.5 101.5 9.1 -6.5 -22.7 26 101 A I - 0 0 0 -2,-1.0 9,-2.0 9,-0.2 32,-0.3 -0.924 20.7-141.9-109.6 135.9 10.7 -5.3 -19.5 27 102 A R E -Bc 34 58A 112 30,-1.8 32,-3.1 -2,-0.4 2,-0.5 -0.665 20.1-107.5 -98.3 157.0 13.7 -3.0 -19.8 28 103 A C E >> - c 0 59A 0 5,-3.3 4,-3.5 -2,-0.3 3,-0.5 -0.748 24.7-142.2 -77.2 127.7 16.8 -2.8 -17.7 29 104 A H T 34 S+ 0 0 109 30,-3.3 -1,-0.1 -2,-0.5 31,-0.1 0.607 100.6 48.3 -70.8 -7.4 16.4 0.3 -15.7 30 105 A R T 34 S+ 0 0 187 29,-0.4 -1,-0.2 3,-0.1 30,-0.1 0.705 125.8 24.1-102.7 -25.6 20.2 0.9 -16.1 31 106 A C T <4 S- 0 0 37 -3,-0.5 -2,-0.2 2,-0.2 29,-0.1 0.721 87.8-136.0-111.8 -30.3 20.4 0.3 -19.9 32 107 A Q < + 0 0 80 -4,-3.5 -3,-0.1 1,-0.4 -5,-0.0 0.638 69.5 116.9 73.4 20.9 16.8 1.1 -21.1 33 108 A R S S- 0 0 175 -5,-0.4 -5,-3.3 1,-0.1 -1,-0.4 -0.834 73.7 -95.4-113.8 149.7 17.1 -2.0 -23.3 34 109 A P B -B 27 0A 84 0, 0.0 2,-0.3 0, 0.0 -7,-0.3 -0.190 39.7-108.6 -63.6 157.7 14.9 -5.1 -22.9 35 110 A L - 0 0 9 -9,-2.0 -9,-0.2 1,-0.1 26,-0.1 -0.699 26.3-129.7 -88.7 138.8 16.0 -8.1 -20.9 36 111 A G > - 0 0 23 -2,-0.3 4,-2.1 1,-0.0 5,-0.3 -0.249 38.9 -88.1 -74.4 174.8 16.9 -11.3 -22.6 37 112 A P H > S+ 0 0 78 0, 0.0 4,-2.3 0, 0.0 3,-0.3 0.927 128.0 41.7 -52.6 -54.0 15.4 -14.7 -21.5 38 113 A E H > S+ 0 0 85 1,-0.2 4,-2.7 2,-0.2 5,-0.1 0.829 111.6 58.1 -67.2 -27.9 17.9 -15.5 -18.7 39 114 A E H > S+ 0 0 17 2,-0.2 4,-0.8 1,-0.2 -1,-0.2 0.892 108.8 43.5 -72.5 -37.0 17.9 -11.9 -17.6 40 115 A K H X S+ 0 0 14 -4,-2.1 4,-1.2 -3,-0.3 3,-0.5 0.900 115.1 51.9 -69.5 -40.2 14.2 -12.0 -17.0 41 116 A Q H X S+ 0 0 87 -4,-2.3 4,-2.6 -5,-0.3 3,-0.2 0.871 98.7 64.0 -63.6 -37.4 14.7 -15.4 -15.4 42 117 A K H X S+ 0 0 18 -4,-2.7 4,-2.9 1,-0.3 -1,-0.2 0.828 101.4 51.2 -60.0 -32.5 17.4 -14.1 -13.0 43 118 A L H <>S+ 0 0 5 -4,-0.8 5,-3.8 -3,-0.5 -1,-0.3 0.903 118.1 36.4 -73.6 -38.6 15.0 -11.8 -11.3 44 119 A V H <5S+ 0 0 22 -4,-1.2 -2,-0.2 -3,-0.2 -1,-0.2 0.742 118.7 53.4 -83.0 -23.1 12.5 -14.7 -10.7 45 120 A D H <5S+ 0 0 87 -4,-2.6 -2,-0.2 1,-0.2 -3,-0.2 0.945 117.9 32.9 -76.7 -47.5 15.4 -17.1 -10.1 46 121 A E T <5S- 0 0 54 -4,-2.9 -1,-0.2 -5,-0.2 -2,-0.2 0.295 117.2-110.8 -95.1 4.3 17.1 -15.0 -7.5 47 122 A K T 5 + 0 0 113 -4,-0.2 -3,-0.2 1,-0.1 2,-0.2 0.952 62.9 148.2 65.9 58.6 13.8 -13.7 -6.1 48 123 A K < - 0 0 76 -5,-3.8 2,-0.4 -6,-0.1 -38,-0.3 -0.468 41.9-112.9-104.9 178.4 13.9 -10.0 -7.1 49 124 A R - 0 0 142 -2,-0.2 2,-0.3 -40,-0.1 -40,-0.2 -0.905 15.1-129.4-119.2 151.5 11.1 -7.7 -8.0 50 125 A F E -A 8 0A 0 -42,-3.1 -42,-2.2 -2,-0.4 2,-0.5 -0.761 25.8-134.0 -94.6 143.6 10.2 -6.0 -11.3 51 126 A H E -AD 7 58A 60 7,-3.1 7,-2.0 -2,-0.3 2,-0.4 -0.894 15.2-161.1-112.8 123.6 9.6 -2.4 -11.1 52 127 A E E +AD 6 57A 3 -46,-3.1 -46,-1.9 -2,-0.5 2,-0.4 -0.807 11.0 176.5 -97.8 137.5 6.7 -0.7 -12.8 53 128 A I E > S- D 0 56A 65 3,-2.4 3,-1.8 -2,-0.4 -49,-0.2 -0.942 79.0 -18.0-138.2 118.5 6.5 3.0 -13.5 54 129 A A T 3 S- 0 0 54 -2,-0.4 3,-0.1 -51,-0.3 -50,-0.1 0.650 128.3 -53.9 61.2 22.6 3.4 4.3 -15.4 55 130 A G T 3 S+ 0 0 20 1,-0.4 2,-0.5 -51,-0.2 -1,-0.3 0.626 113.5 120.7 85.8 13.4 2.7 0.7 -16.5 56 131 A R E < - D 0 53A 107 -3,-1.8 -3,-2.4 -55,-0.1 -1,-0.4 -0.958 55.3-142.3-108.9 127.9 6.1 0.3 -17.9 57 132 A W E + D 0 52A 6 -2,-0.5 -30,-1.8 -32,-0.4 2,-0.3 -0.691 22.2 173.9 -96.3 148.6 8.1 -2.5 -16.5 58 133 A T E +cD 27 51A 6 -7,-2.0 -7,-3.1 -2,-0.3 -30,-0.2 -0.951 7.7 151.4-148.9 152.0 11.7 -2.4 -15.8 59 134 A G E -c 28 0A 13 -32,-3.1 -30,-3.3 -2,-0.3 2,-0.4 -0.650 47.2 -71.4-154.7-146.4 14.2 -4.6 -14.1 60 135 A Q - 0 0 74 -32,-0.3 2,-0.3 -21,-0.2 -17,-0.1 -0.993 34.8-135.5-135.1 126.8 17.9 -5.4 -14.4 61 136 A C >> - 0 0 6 -2,-0.4 4,-2.4 1,-0.1 3,-1.1 -0.647 13.8-134.4 -84.1 141.6 19.6 -7.2 -17.2 62 137 A A H 3>>S+ 0 0 7 -2,-0.3 4,-2.9 1,-0.3 5,-0.7 0.681 96.8 82.4 -64.2 -22.7 22.2 -9.8 -16.4 63 138 A N H 345S+ 0 0 130 2,-0.2 4,-0.3 1,-0.2 -1,-0.3 0.924 113.4 17.8 -48.7 -47.3 24.4 -8.2 -19.1 64 139 A C H <>5S+ 0 0 33 -3,-1.1 4,-0.7 2,-0.1 -2,-0.2 0.911 131.2 50.2 -86.1 -46.7 25.4 -5.7 -16.5 65 140 A W H X5S+ 0 0 27 -4,-2.4 4,-0.7 2,-0.2 3,-0.4 0.815 104.2 54.2 -65.9 -38.8 24.3 -7.6 -13.4 66 141 A Q H ><5S+ 0 0 68 -4,-2.9 3,-1.1 1,-0.3 -1,-0.2 0.938 113.5 44.7 -64.1 -41.1 26.0 -10.9 -14.0 67 142 A R H 34 - 0 0 89 -2,-0.3 2,-2.0 1,-0.1 3,-1.0 -0.105 31.8 -95.4 -69.5 161.7 35.8 -15.3 -13.1 74 149 A T T 3 S+ 0 0 147 1,-0.2 -1,-0.1 2,-0.1 0, 0.0 -0.583 103.2 82.8 -79.8 80.7 37.4 -13.1 -15.7 75 150 A Q T 3 0 0 154 -2,-2.0 -1,-0.2 -3,-0.0 -2,-0.0 0.300 360.0 360.0-140.9 -46.0 36.1 -14.9 -18.8 76 151 A V < 0 0 133 -3,-1.0 -2,-0.1 -10,-0.1 -3,-0.0 -0.744 360.0 360.0-138.9 360.0 32.7 -13.4 -19.1