==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 02-JUL-02 1M4F . COMPND 2 MOLECULE: HEPCIDIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR H.N.HUNTER,D.B.FULTON,T.GANZ,H.J.VOGEL . 25 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2555.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 10 40.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 20.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 16.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A D 0 0 150 0, 0.0 23,-0.1 0, 0.0 2,-0.1 0.000 360.0 360.0 360.0 -39.9 -7.2 -6.7 -1.5 2 2 A T - 0 0 75 21,-0.2 21,-0.0 1,-0.1 22,-0.0 -0.355 360.0-135.9 -64.1 139.2 -10.0 -4.3 -0.5 3 3 A H S S+ 0 0 195 1,-0.2 -1,-0.1 -2,-0.1 21,-0.0 0.872 99.3 5.6 -63.2 -38.8 -11.7 -2.6 -3.4 4 4 A F S S+ 0 0 178 19,-0.1 -1,-0.2 0, 0.0 -2,-0.0 -0.409 88.9 149.8-146.3 63.6 -11.6 0.7 -1.5 5 5 A P - 0 0 30 0, 0.0 19,-0.1 0, 0.0 18,-0.1 0.380 66.9 -73.6 -73.1-146.8 -9.7 0.4 1.8 6 6 A I - 0 0 119 17,-0.5 17,-0.2 16,-0.2 3,-0.1 0.850 48.5-161.6 -83.5 -37.9 -7.6 3.2 3.4 7 7 A a - 0 0 25 16,-0.5 16,-0.3 15,-0.4 2,-0.2 0.872 14.4-167.5 56.4 40.8 -4.8 3.1 0.9 8 8 A I E -A 22 0A 100 14,-0.7 14,-2.9 13,-0.2 -1,-0.2 -0.403 28.1-105.3 -62.2 127.2 -2.5 5.0 3.3 9 9 A F E +A 21 0A 145 12,-0.2 2,-0.2 -2,-0.2 12,-0.2 -0.236 48.2 169.1 -55.3 138.4 0.6 6.1 1.5 10 10 A b E -A 20 0A 41 10,-1.2 10,-1.3 -3,-0.1 2,-0.4 -0.789 27.4-140.8-158.7 109.6 3.7 4.1 2.3 11 11 A c E -A 19 0A 66 8,-0.3 2,-1.3 -2,-0.2 8,-0.3 -0.580 29.8-116.3 -75.2 124.9 7.1 4.2 0.6 12 12 A G + 0 0 24 6,-2.1 6,-0.2 -2,-0.4 -1,-0.1 -0.451 44.3 170.6 -63.8 93.9 8.6 0.7 0.2 13 13 A C S S- 0 0 101 -2,-1.3 -1,-0.2 4,-0.2 4,-0.1 0.852 71.0 -5.4 -70.5 -49.6 11.7 1.3 2.3 14 14 A C S S+ 0 0 92 2,-0.2 3,-0.2 -3,-0.1 -2,-0.1 0.720 130.9 46.1-120.3 -55.5 13.1 -2.1 2.6 15 15 A H S S+ 0 0 178 1,-0.3 2,-0.6 2,-0.0 -3,-0.1 0.954 128.4 15.7 -56.1 -84.9 10.9 -4.8 1.0 16 16 A R S S- 0 0 160 2,-0.1 2,-2.7 1,-0.1 -1,-0.3 -0.805 77.3-141.3 -91.5 119.9 10.1 -3.1 -2.3 17 17 A S S S+ 0 0 115 -2,-0.6 2,-0.3 -3,-0.2 -4,-0.2 -0.248 74.6 91.9 -75.2 52.8 12.4 -0.2 -2.9 18 18 A K S S- 0 0 125 -2,-2.7 -6,-2.1 -6,-0.2 -2,-0.1 -0.988 79.0-113.7-150.5 139.4 9.5 1.7 -4.3 19 19 A c E +A 11 0A 82 -2,-0.3 2,-0.3 -8,-0.3 -8,-0.3 -0.442 47.0 154.3 -71.4 141.8 6.8 4.1 -3.0 20 20 A G E -A 10 0A 27 -10,-1.3 -10,-1.2 -2,-0.1 2,-0.3 -0.964 46.6 -95.6-167.9 150.1 3.3 2.8 -3.0 21 21 A M E -A 9 0A 117 -2,-0.3 2,-1.9 -12,-0.2 3,-0.3 -0.551 29.5-136.4 -73.7 128.3 -0.2 3.1 -1.4 22 22 A b E +A 8 0A 50 -14,-2.9 -14,-0.7 -2,-0.3 -15,-0.4 -0.331 49.7 146.7 -80.1 56.3 -0.8 0.5 1.4 23 23 A a + 0 0 40 -2,-1.9 -17,-0.5 -16,-0.3 -16,-0.5 0.961 65.2 40.4 -56.7 -54.8 -4.3 -0.2 0.2 24 24 A K 0 0 127 -3,-0.3 -17,-0.2 -19,-0.1 -18,-0.1 0.385 360.0 360.0 -71.4-148.0 -4.2 -3.9 1.2 25 25 A T 0 0 193 0, 0.0 -2,-0.0 0, 0.0 -1,-0.0 -0.873 360.0 360.0-165.0 360.0 -2.6 -5.2 4.4