==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 31-JUL-02 1MA4 . COMPND 2 MOLECULE: TACHYPLESIN 1; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.LAEDERACH,A.H.ANDREOTTI,D.B.FULTON . 17 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2229.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 6 35.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 29.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A K 0 0 240 0, 0.0 16,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 139.2 -2.6 -9.2 4.8 2 2 A W - 0 0 149 14,-0.1 13,-0.1 13,-0.1 14,-0.1 0.418 360.0-126.9 -66.7-148.8 -1.5 -6.3 2.6 3 3 A Y - 0 0 85 12,-0.2 -1,-0.1 9,-0.0 3,-0.1 0.408 15.6-127.6-128.6 -91.2 -3.8 -3.7 1.2 4 4 A F S S- 0 0 130 8,-0.2 11,-0.1 1,-0.1 -2,-0.0 -0.080 79.2 -29.5 159.8 -40.9 -3.9 -2.9 -2.5 5 5 A R S S+ 0 0 141 7,-0.1 2,-2.3 10,-0.0 6,-0.2 0.067 73.8 140.7-158.8 -74.3 -3.5 0.9 -2.8 6 6 A V + 0 0 55 1,-0.2 2,-2.0 -3,-0.1 4,-0.1 -0.266 40.4 111.0 53.4 -76.6 -4.9 2.9 0.2 7 7 A Y > + 0 0 87 -2,-2.3 3,-1.9 5,-0.4 2,-1.6 0.381 45.0 172.4 8.2 -41.9 -1.9 5.4 0.2 8 8 A Y T 3 S- 0 0 145 -2,-2.0 -1,-0.2 1,-0.3 -2,-0.1 -0.263 80.6 -9.7 51.8 -81.8 -4.5 7.9 -1.0 9 9 A R T 3 S+ 0 0 221 -2,-1.6 -1,-0.3 -3,-0.0 -2,-0.1 -0.144 131.4 74.9-131.2 33.3 -2.0 10.8 -0.7 10 10 A G S < S- 0 0 39 -3,-1.9 -2,-0.1 -4,-0.1 3,-0.1 0.731 101.6 -83.4-107.7 -85.9 0.7 9.0 1.1 11 11 A I - 0 0 115 -6,-0.2 2,-2.6 1,-0.0 -5,-0.0 0.095 40.7-111.0 165.7 64.3 2.9 6.5 -0.8 12 12 A Y - 0 0 80 2,-0.1 -5,-0.4 -7,-0.1 -8,-0.2 0.076 52.5-154.3 30.4 -58.3 1.4 3.0 -1.3 13 13 A Y - 0 0 84 -2,-2.6 2,-1.8 1,-0.1 3,-0.2 -0.090 45.2 -26.5 85.5 172.3 4.0 1.5 1.0 14 14 A R + 0 0 157 1,-0.2 -1,-0.1 2,-0.1 -2,-0.1 -0.367 69.1 160.6 -60.6 85.8 5.5 -2.0 1.1 15 15 A R + 0 0 147 -2,-1.8 -1,-0.2 1,-0.2 -12,-0.2 0.815 65.6 63.6 -78.9 -32.5 2.4 -3.7 -0.4 16 16 A Y 0 0 118 1,-0.3 -1,-0.2 -3,-0.2 -14,-0.1 0.928 360.0 360.0 -57.3 -47.9 4.3 -6.9 -1.4 17 17 A R 0 0 236 -16,-0.1 -1,-0.3 -15,-0.0 -2,-0.1 -0.873 360.0 360.0-157.5 360.0 5.1 -7.7 2.2