==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION REGULATION 23-SEP-97 1NKD . COMPND 2 MOLECULE: ROP; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR M.VLASSI,M.KOKKINIDIS . 59 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4616.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 86.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 47 79.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 92 0, 0.0 58,-0.1 0, 0.0 2,-0.1 0.000 360.0 360.0 360.0 155.6 2.6 3.5 2.5 2 2 A T > - 0 0 67 1,-0.1 4,-2.3 56,-0.0 5,-0.1 -0.303 360.0-112.5 -73.4 164.9 5.0 1.8 0.0 3 3 A K H > S+ 0 0 159 2,-0.2 4,-2.2 1,-0.2 5,-0.2 0.883 120.0 52.8 -64.3 -37.7 7.3 -1.0 1.2 4 4 A Q H > S+ 0 0 171 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.902 108.6 49.8 -65.5 -38.2 10.3 1.3 0.8 5 5 A E H > S+ 0 0 64 1,-0.2 4,-2.7 2,-0.2 -2,-0.2 0.921 108.6 53.3 -63.6 -39.9 8.6 3.9 2.9 6 6 A K H X S+ 0 0 77 -4,-2.3 4,-2.8 1,-0.2 5,-0.2 0.899 106.0 52.7 -63.4 -42.1 7.8 1.3 5.6 7 7 A T H X S+ 0 0 85 -4,-2.2 4,-2.2 2,-0.2 -1,-0.2 0.931 112.2 45.8 -56.9 -46.7 11.5 0.2 5.7 8 8 A A H X S+ 0 0 41 -4,-1.8 4,-2.4 1,-0.2 -2,-0.2 0.918 112.3 49.8 -63.6 -43.3 12.5 3.8 6.3 9 9 A L H X S+ 0 0 7 -4,-2.7 4,-2.4 2,-0.2 -2,-0.2 0.923 111.0 49.7 -62.7 -45.3 9.8 4.5 8.9 10 10 A N H X S+ 0 0 77 -4,-2.8 4,-2.1 1,-0.2 -1,-0.2 0.890 111.4 49.7 -60.5 -41.4 10.8 1.3 10.8 11 11 A M H X S+ 0 0 100 -4,-2.2 4,-2.7 -5,-0.2 -1,-0.2 0.899 108.2 52.2 -66.0 -39.7 14.5 2.4 10.7 12 12 A A H X S+ 0 0 9 -4,-2.4 4,-2.2 2,-0.2 39,-0.2 0.917 110.0 49.8 -62.5 -40.3 13.6 5.9 12.0 13 13 A R H X S+ 0 0 99 -4,-2.4 4,-2.2 2,-0.2 -2,-0.2 0.924 111.2 49.4 -60.1 -46.0 11.7 4.2 14.9 14 14 A F H X S+ 0 0 123 -4,-2.1 4,-2.7 2,-0.2 -2,-0.2 0.930 110.1 49.8 -60.4 -47.1 14.7 2.0 15.7 15 15 A I H X S+ 0 0 80 -4,-2.7 4,-2.6 2,-0.2 5,-0.2 0.910 108.2 53.7 -62.9 -40.7 17.1 5.0 15.6 16 16 A R H X S+ 0 0 72 -4,-2.2 4,-1.6 31,-0.2 -1,-0.2 0.950 111.8 45.0 -58.8 -43.8 14.9 7.0 17.9 17 17 A S H X S+ 0 0 65 -4,-2.2 4,-2.2 1,-0.2 -2,-0.2 0.915 112.6 50.6 -68.0 -40.4 14.9 4.1 20.4 18 18 A Q H X S+ 0 0 98 -4,-2.7 4,-2.4 1,-0.2 -1,-0.2 0.875 107.9 52.9 -64.6 -41.3 18.7 3.5 20.1 19 19 A T H X S+ 0 0 14 -4,-2.6 4,-2.3 2,-0.2 -1,-0.2 0.850 108.3 50.8 -64.7 -32.8 19.4 7.2 20.7 20 20 A L H X S+ 0 0 69 -4,-1.6 4,-2.4 -5,-0.2 -2,-0.2 0.919 109.7 50.2 -67.1 -43.7 17.3 7.1 23.9 21 21 A T H X S+ 0 0 54 -4,-2.2 4,-2.1 1,-0.2 -2,-0.2 0.931 112.3 47.1 -58.8 -45.7 19.2 4.0 25.1 22 22 A L H X S+ 0 0 82 -4,-2.4 4,-2.7 2,-0.2 5,-0.2 0.917 108.9 54.9 -63.6 -40.8 22.5 5.8 24.4 23 23 A L H X S+ 0 0 6 -4,-2.3 4,-2.8 1,-0.2 5,-0.2 0.928 107.9 49.7 -57.6 -45.2 21.3 8.9 26.2 24 24 A E H X S+ 0 0 95 -4,-2.4 4,-2.1 1,-0.2 -1,-0.2 0.914 111.4 48.8 -58.5 -46.8 20.5 6.8 29.3 25 25 A K H X S+ 0 0 120 -4,-2.1 4,-1.1 2,-0.2 -2,-0.2 0.913 112.8 46.6 -62.5 -42.9 23.9 5.3 29.2 26 26 A L H < S+ 0 0 28 -4,-2.7 3,-0.4 1,-0.2 4,-0.4 0.906 111.3 52.3 -67.2 -40.0 25.7 8.6 28.8 27 27 A N H >< S+ 0 0 83 -4,-2.8 3,-1.4 1,-0.2 -1,-0.2 0.888 104.8 56.5 -61.3 -39.7 23.5 10.1 31.6 28 28 A E H 3< S+ 0 0 149 -4,-2.1 -1,-0.2 1,-0.3 -2,-0.2 0.799 97.2 62.6 -64.4 -27.4 24.5 7.3 33.9 29 29 A L T >< S- 0 0 98 -4,-1.1 3,-1.5 -3,-0.4 -1,-0.3 0.590 87.8-172.6 -75.6 -7.4 28.2 8.1 33.4 30 30 A A G X + 0 0 60 -3,-1.4 3,-1.9 -4,-0.4 -1,-0.2 -0.198 63.5 3.0 58.0-135.3 27.6 11.5 35.0 31 31 A D G > S+ 0 0 131 1,-0.3 3,-1.2 2,-0.2 4,-0.3 0.841 124.7 68.0 -58.0 -29.5 30.5 13.9 34.9 32 32 A A G < S+ 0 0 77 -3,-1.5 -1,-0.3 1,-0.3 -2,-0.2 0.618 118.4 21.0 -66.3 -13.6 32.6 11.5 32.9 33 33 A A G <> S+ 0 0 4 -3,-1.9 4,-2.7 -7,-0.2 -1,-0.3 0.084 84.8 128.5-139.7 26.8 30.3 11.9 29.9 34 34 A D H <> S+ 0 0 95 -3,-1.2 4,-2.1 1,-0.2 5,-0.1 0.900 76.8 41.4 -58.2 -52.3 28.6 15.2 30.6 35 35 A E H > S+ 0 0 120 -4,-0.3 4,-2.2 1,-0.2 -1,-0.2 0.875 115.7 53.0 -63.7 -36.8 29.2 17.0 27.3 36 36 A Q H > S+ 0 0 88 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.905 107.4 50.6 -67.1 -40.3 28.4 13.8 25.4 37 37 A A H X S+ 0 0 5 -4,-2.7 4,-2.1 -11,-0.2 -1,-0.2 0.888 109.0 52.0 -61.8 -41.8 25.1 13.4 27.2 38 38 A D H X S+ 0 0 117 -4,-2.1 4,-1.5 -5,-0.2 -2,-0.2 0.917 111.5 45.9 -64.1 -42.3 24.2 17.0 26.3 39 39 A I H X S+ 0 0 106 -4,-2.2 4,-2.2 1,-0.2 -2,-0.2 0.912 112.7 51.5 -62.0 -44.2 24.9 16.3 22.6 40 40 A C H X S+ 0 0 5 -4,-2.6 4,-2.8 2,-0.2 -2,-0.2 0.840 102.4 59.2 -66.7 -31.1 23.0 13.0 22.8 41 41 A E H X S+ 0 0 83 -4,-2.1 4,-2.1 1,-0.2 -1,-0.2 0.957 110.3 42.9 -60.1 -46.3 19.9 14.7 24.3 42 42 A S H X S+ 0 0 76 -4,-1.5 4,-2.3 1,-0.2 -2,-0.2 0.882 111.9 55.0 -63.1 -43.9 19.8 16.9 21.3 43 43 A L H X S+ 0 0 82 -4,-2.2 4,-2.4 2,-0.2 -2,-0.2 0.920 108.0 48.8 -58.0 -46.4 20.4 13.9 19.0 44 44 A H H X S+ 0 0 30 -4,-2.8 4,-2.4 2,-0.2 -2,-0.2 0.927 109.8 51.0 -62.3 -43.1 17.5 12.1 20.5 45 45 A D H X S+ 0 0 92 -4,-2.1 4,-2.3 -5,-0.2 -1,-0.2 0.904 111.1 49.6 -60.3 -38.4 15.2 15.1 20.1 46 46 A H H X S+ 0 0 120 -4,-2.3 4,-2.3 2,-0.2 -2,-0.2 0.889 109.4 50.5 -69.6 -34.9 16.3 15.2 16.5 47 47 A A H X S+ 0 0 14 -4,-2.4 4,-2.4 2,-0.2 -31,-0.2 0.881 110.1 51.1 -67.5 -37.8 15.7 11.5 16.0 48 48 A D H X S+ 0 0 29 -4,-2.4 4,-2.7 2,-0.2 5,-0.2 0.938 108.7 51.1 -63.5 -42.9 12.2 12.0 17.4 49 49 A E H X S+ 0 0 135 -4,-2.3 4,-2.3 1,-0.2 -2,-0.2 0.928 110.9 48.9 -61.1 -43.4 11.5 14.9 15.1 50 50 A L H X S+ 0 0 96 -4,-2.3 4,-2.6 2,-0.2 5,-0.2 0.934 111.7 48.8 -60.9 -48.4 12.6 12.7 12.1 51 51 A Y H X S+ 0 0 24 -4,-2.4 4,-2.7 -39,-0.2 5,-0.2 0.955 112.0 48.2 -57.6 -47.8 10.4 9.8 13.2 52 52 A R H X S+ 0 0 160 -4,-2.7 4,-2.3 1,-0.2 -1,-0.2 0.880 111.3 51.5 -59.9 -41.3 7.4 12.1 13.7 53 53 A S H X S+ 0 0 75 -4,-2.3 4,-2.2 -5,-0.2 -1,-0.2 0.914 111.1 46.5 -63.3 -44.1 8.0 13.6 10.3 54 54 A C H X S+ 0 0 17 -4,-2.6 4,-3.0 -5,-0.2 5,-0.4 0.918 111.0 52.6 -61.0 -46.1 8.2 10.2 8.5 55 55 A L H X S+ 0 0 76 -4,-2.7 4,-1.8 -5,-0.2 -2,-0.2 0.940 111.6 46.2 -58.2 -41.7 5.1 9.0 10.3 56 56 A A H < S+ 0 0 80 -4,-2.3 -2,-0.2 -5,-0.2 -1,-0.2 0.930 118.5 41.3 -71.9 -31.4 3.1 12.1 9.2 57 57 A R H < S+ 0 0 204 -4,-2.2 -2,-0.2 -5,-0.2 -3,-0.2 0.946 125.0 30.6 -80.9 -39.5 4.2 11.9 5.7 58 58 A F H < 0 0 47 -4,-3.0 -3,-0.2 -5,-0.2 -2,-0.2 0.743 360.0 360.0 -87.4 -26.0 4.1 8.3 5.0 59 59 A G < 0 0 84 -4,-1.8 -3,-0.1 -5,-0.4 -4,-0.1 0.153 360.0 360.0 -98.0 360.0 1.3 7.3 7.2