==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-APR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PEPTIDE BINDING PROTEIN 22-JUL-10 3O2H . COMPND 2 MOLECULE: ATP-DEPENDENT CLP PROTEASE ADAPTOR PROTEIN CLPS; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR G.ROMAN-HERNANDEZ,R.A.GRANT,R.T.SAUER,T.A.BAKER,A.DE REGT . 106 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7709.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 73 68.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 15.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 42 39.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 12 A Q > 0 0 148 0, 0.0 4,-2.1 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0-159.2 68.7 -4.4 -21.5 2 13 A L H > + 0 0 140 1,-0.2 4,-1.6 2,-0.2 5,-0.1 0.913 360.0 48.6 -63.8 -40.4 66.6 -7.4 -22.6 3 14 A A H > S+ 0 0 56 1,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.842 110.7 51.8 -64.1 -37.2 66.0 -8.4 -19.0 4 15 A E H > S+ 0 0 98 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.821 107.0 52.0 -71.7 -34.4 65.0 -4.8 -18.2 5 16 A E H X S+ 0 0 103 -4,-2.1 4,-2.0 2,-0.2 -1,-0.2 0.839 107.4 53.4 -68.4 -35.0 62.5 -4.7 -21.1 6 17 A K H < S+ 0 0 167 -4,-1.6 4,-0.4 2,-0.2 -2,-0.2 0.879 108.8 49.9 -66.2 -39.1 61.0 -7.9 -19.8 7 18 A V H >< S+ 0 0 88 -4,-1.6 3,-1.5 2,-0.2 -2,-0.2 0.945 108.9 51.0 -64.3 -48.7 60.6 -6.3 -16.3 8 19 A R H >< S+ 0 0 148 -4,-2.2 3,-1.8 1,-0.3 -2,-0.2 0.930 107.4 54.2 -53.3 -47.6 58.9 -3.1 -17.8 9 20 A D T 3< S+ 0 0 112 -4,-2.0 3,-0.3 1,-0.3 -1,-0.3 0.565 102.4 57.3 -72.2 -7.4 56.4 -5.2 -19.7 10 21 A A T < S+ 0 0 78 -3,-1.5 -1,-0.3 -4,-0.4 -2,-0.2 0.158 86.0 83.6-105.6 20.0 55.3 -7.1 -16.6 11 22 A L < + 0 0 125 -3,-1.8 -1,-0.2 2,-0.0 -2,-0.1 -0.055 49.8 144.3-114.7 31.1 54.3 -3.9 -14.7 12 23 A K - 0 0 174 -3,-0.3 3,-0.1 1,-0.1 -3,-0.0 -0.580 58.7-108.2 -68.4 125.1 50.8 -3.4 -16.0 13 24 A P - 0 0 116 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.179 37.6 -96.8 -56.1 146.0 48.8 -2.0 -13.1 14 25 A P - 0 0 101 0, 0.0 2,-0.9 0, 0.0 -3,-0.0 -0.290 36.4-110.3 -57.4 145.3 46.1 -4.3 -11.6 15 26 A S - 0 0 63 -3,-0.1 52,-0.9 80,-0.1 2,-0.3 -0.758 48.7-176.8 -78.9 108.1 42.6 -3.9 -12.8 16 27 A M E -A 66 0A 57 -2,-0.9 79,-2.9 50,-0.2 2,-0.4 -0.850 12.7-155.7-114.0 150.9 40.9 -2.4 -9.7 17 28 A Y E -AB 65 94A 62 48,-3.0 48,-2.6 -2,-0.3 2,-0.3 -0.982 13.5-134.5-130.4 132.0 37.3 -1.4 -9.1 18 29 A K E -AB 64 93A 63 75,-3.0 75,-1.9 -2,-0.4 2,-0.5 -0.649 20.1-142.9 -72.1 134.0 35.6 1.0 -6.8 19 30 A V E -AB 63 92A 0 44,-2.3 43,-3.3 -2,-0.3 44,-0.8 -0.927 26.7-167.5 -99.9 131.8 32.6 -0.5 -5.1 20 31 A I E -AB 61 91A 2 71,-2.8 71,-2.4 -2,-0.5 2,-0.4 -0.902 22.4-147.9-127.6 139.2 29.9 2.1 -4.8 21 32 A L E -AB 60 90A 0 39,-2.3 39,-1.9 -2,-0.4 2,-0.4 -0.931 22.6-147.9-100.9 135.9 26.6 2.6 -2.9 22 33 A V E -AB 59 89A 50 67,-2.5 67,-0.6 -2,-0.4 37,-0.3 -0.833 16.5-114.5-106.8 139.0 24.0 4.6 -4.8 23 34 A N + 0 0 42 35,-2.8 2,-0.3 -2,-0.4 32,-0.1 -0.287 35.7 170.3 -67.3 153.1 21.5 6.8 -3.1 24 35 A D - 0 0 25 3,-0.2 3,-0.1 64,-0.0 64,-0.1 -0.957 41.1-117.4-153.8 164.2 17.7 6.2 -3.2 25 36 A D S S+ 0 0 116 -2,-0.3 -2,-0.0 1,-0.2 30,-0.0 0.255 103.8 48.5 -89.5 14.1 14.8 7.7 -1.4 26 37 A Y S S+ 0 0 172 2,-0.1 -1,-0.2 72,-0.1 -3,-0.0 0.672 79.2 94.4-124.8 -29.4 13.6 4.5 0.5 27 38 A T S S- 0 0 0 1,-0.1 71,-2.4 -3,-0.1 -3,-0.2 -0.526 77.5-115.8 -75.4 129.7 16.6 2.8 2.1 28 39 A P B >> -c 98 0B 43 0, 0.0 4,-1.4 0, 0.0 3,-0.5 -0.337 11.6-130.8 -66.6 143.0 17.0 3.7 5.8 29 40 A M H 3> S+ 0 0 17 69,-2.8 4,-1.9 1,-0.2 3,-0.2 0.901 110.2 56.3 -58.3 -42.3 20.2 5.6 6.8 30 41 A E H 3> S+ 0 0 111 68,-0.4 4,-2.2 1,-0.2 -1,-0.2 0.831 102.7 55.2 -59.2 -31.3 20.7 3.1 9.6 31 42 A F H <> S+ 0 0 15 -3,-0.5 4,-2.5 2,-0.2 -1,-0.2 0.878 105.8 51.0 -72.0 -36.2 20.6 0.2 7.1 32 43 A V H X S+ 0 0 0 -4,-1.4 4,-2.1 -3,-0.2 -1,-0.2 0.876 108.5 51.6 -67.4 -36.8 23.4 1.8 5.1 33 44 A I H X S+ 0 0 8 -4,-1.9 4,-2.2 2,-0.2 -2,-0.2 0.957 109.7 50.6 -62.3 -45.4 25.4 2.2 8.2 34 45 A D H X S+ 0 0 55 -4,-2.2 4,-2.9 1,-0.2 5,-0.3 0.918 108.8 51.9 -54.2 -48.1 24.8 -1.5 8.9 35 46 A V H X S+ 0 0 0 -4,-2.5 4,-2.5 1,-0.2 5,-0.4 0.909 109.6 48.4 -57.2 -45.8 25.9 -2.4 5.4 36 47 A L H X S+ 0 0 0 -4,-2.1 6,-1.8 1,-0.2 4,-0.9 0.849 115.5 44.4 -67.3 -35.9 29.2 -0.6 5.7 37 48 A Q H X S+ 0 0 78 -4,-2.2 4,-0.8 4,-0.2 -2,-0.2 0.917 117.8 43.2 -71.0 -44.8 29.9 -2.2 9.1 38 49 A K H < S+ 0 0 118 -4,-2.9 -2,-0.2 -5,-0.2 -3,-0.2 0.872 127.9 23.3 -72.1 -41.8 29.0 -5.7 8.1 39 50 A F H < S+ 0 0 35 -4,-2.5 -3,-0.2 -5,-0.3 -1,-0.2 0.552 131.5 33.8-107.9 -10.1 30.5 -6.0 4.6 40 51 A F H < S- 0 0 22 -4,-0.9 -3,-0.2 -5,-0.4 -2,-0.1 0.352 95.5-123.1-129.2 2.6 33.3 -3.4 4.6 41 52 A S < + 0 0 111 -4,-0.8 2,-0.2 1,-0.2 -4,-0.2 0.770 51.4 160.8 62.1 30.8 34.6 -3.5 8.2 42 53 A Y - 0 0 74 -6,-1.8 -1,-0.2 -9,-0.1 -2,-0.1 -0.589 40.3-121.8 -80.2 142.9 34.0 0.2 8.8 43 54 A D > - 0 0 93 -2,-0.2 4,-2.4 1,-0.1 5,-0.2 -0.343 36.5 -98.6 -72.9 167.8 33.8 1.5 12.4 44 55 A V H > S+ 0 0 80 1,-0.2 4,-2.0 2,-0.2 5,-0.1 0.853 121.4 51.8 -61.9 -35.4 30.5 3.2 13.3 45 56 A E H > S+ 0 0 147 2,-0.2 4,-1.7 1,-0.2 -1,-0.2 0.949 113.1 42.5 -67.5 -47.8 31.9 6.7 12.9 46 57 A R H > S+ 0 0 38 1,-0.2 4,-2.1 2,-0.2 -2,-0.2 0.869 113.3 53.8 -64.9 -39.5 33.4 6.1 9.4 47 58 A A H X S+ 0 0 0 -4,-2.4 4,-2.2 1,-0.2 -1,-0.2 0.899 106.8 52.4 -61.0 -42.3 30.2 4.2 8.3 48 59 A T H X S+ 0 0 41 -4,-2.0 4,-2.1 -5,-0.2 -1,-0.2 0.897 109.4 48.2 -63.6 -41.3 28.1 7.2 9.4 49 60 A Q H X S+ 0 0 123 -4,-1.7 4,-1.9 2,-0.2 -1,-0.2 0.881 112.8 47.5 -65.6 -41.6 30.2 9.7 7.3 50 61 A L H X S+ 0 0 32 -4,-2.1 4,-2.4 2,-0.2 -1,-0.2 0.876 110.1 53.4 -67.6 -37.2 30.1 7.5 4.2 51 62 A M H X S+ 0 0 7 -4,-2.2 4,-2.1 2,-0.2 -2,-0.2 0.918 108.2 49.9 -63.0 -44.1 26.3 7.0 4.6 52 63 A L H X S+ 0 0 64 -4,-2.1 4,-2.9 1,-0.2 5,-0.4 0.866 107.9 54.2 -62.5 -35.3 25.9 10.8 4.8 53 64 A A H X>S+ 0 0 15 -4,-1.9 4,-2.7 2,-0.2 5,-0.7 0.929 107.1 50.9 -61.9 -46.2 28.0 11.0 1.6 54 65 A V H X5S+ 0 0 0 -4,-2.4 4,-1.2 3,-0.2 -31,-0.3 0.945 115.5 42.6 -53.2 -47.6 25.6 8.6 -0.1 55 66 A H H <5S+ 0 0 53 -4,-2.1 -2,-0.2 1,-0.2 -1,-0.2 0.923 126.2 29.3 -69.6 -45.9 22.6 10.7 1.0 56 67 A Y H <5S+ 0 0 178 -4,-2.9 -3,-0.2 -5,-0.1 -2,-0.2 0.793 127.5 38.2 -91.3 -30.9 24.0 14.2 0.2 57 68 A Q H <5S- 0 0 155 -4,-2.7 -3,-0.2 -5,-0.4 -2,-0.2 0.678 105.4-116.2 -95.5 -20.6 26.4 13.5 -2.7 58 69 A G S < -A 16 0A 70 -2,-0.3 4,-2.9 -50,-0.2 5,-0.2 -0.288 53.3-106.5 -60.1 157.6 40.3 -6.5 -7.4 67 78 A A H > S+ 0 0 28 -52,-0.9 4,-2.2 1,-0.2 5,-0.2 0.896 120.0 51.3 -56.2 -40.6 37.6 -7.2 -9.9 68 79 A E H > S+ 0 0 157 2,-0.2 4,-1.3 1,-0.2 -1,-0.2 0.945 114.3 41.5 -65.0 -46.8 37.0 -10.6 -8.4 69 80 A V H > S+ 0 0 63 1,-0.2 4,-2.1 2,-0.2 -2,-0.2 0.890 112.1 55.9 -69.3 -38.5 36.6 -9.3 -4.9 70 81 A A H X S+ 0 0 0 -4,-2.9 4,-2.3 1,-0.2 -1,-0.2 0.913 106.1 50.0 -59.6 -45.0 34.6 -6.3 -6.0 71 82 A E H X S+ 0 0 125 -4,-2.2 4,-2.2 -5,-0.2 -1,-0.2 0.843 110.0 52.8 -63.4 -31.7 32.0 -8.5 -7.8 72 83 A T H X S+ 0 0 73 -4,-1.3 4,-2.1 2,-0.2 -2,-0.2 0.875 108.9 48.2 -71.6 -37.0 31.7 -10.5 -4.6 73 84 A K H X S+ 0 0 40 -4,-2.1 4,-2.8 2,-0.2 5,-0.3 0.911 111.9 49.8 -68.4 -41.2 31.0 -7.4 -2.5 74 85 A V H X S+ 0 0 24 -4,-2.3 4,-2.3 1,-0.2 5,-0.3 0.954 110.9 49.1 -64.6 -48.0 28.4 -6.2 -4.9 75 86 A A H X S+ 0 0 62 -4,-2.2 4,-2.0 1,-0.2 -1,-0.2 0.934 114.9 44.8 -56.7 -49.0 26.6 -9.5 -5.0 76 87 A M H X S+ 0 0 74 -4,-2.1 4,-2.6 2,-0.2 -2,-0.2 0.920 113.1 48.3 -62.7 -47.5 26.6 -9.8 -1.1 77 88 A V H X S+ 0 0 0 -4,-2.8 4,-2.7 1,-0.2 -2,-0.2 0.936 113.0 47.4 -63.3 -48.0 25.5 -6.2 -0.4 78 89 A N H X S+ 0 0 30 -4,-2.3 4,-3.0 -5,-0.3 5,-0.2 0.893 111.9 51.0 -58.3 -41.0 22.6 -6.3 -2.9 79 90 A K H X S+ 0 0 136 -4,-2.0 4,-2.5 -5,-0.3 -2,-0.2 0.944 111.1 47.6 -62.6 -47.8 21.5 -9.7 -1.6 80 91 A Y H X S+ 0 0 28 -4,-2.6 4,-1.0 2,-0.2 -2,-0.2 0.919 112.9 50.2 -57.8 -44.6 21.5 -8.3 2.0 81 92 A A H ><>S+ 0 0 0 -4,-2.7 5,-2.3 -5,-0.2 3,-0.7 0.954 112.8 45.1 -61.0 -49.2 19.6 -5.2 0.8 82 93 A R H ><5S+ 0 0 100 -4,-3.0 3,-1.9 1,-0.2 -1,-0.2 0.871 107.3 56.4 -64.6 -38.0 16.9 -7.2 -1.1 83 94 A E H 3<5S+ 0 0 116 -4,-2.5 -1,-0.2 1,-0.3 -2,-0.2 0.774 109.8 48.0 -68.8 -19.0 16.3 -9.7 1.7 84 95 A N T <<5S- 0 0 68 -4,-1.0 -1,-0.3 -3,-0.7 -2,-0.2 0.246 119.9-115.5 -97.7 9.1 15.6 -6.7 3.9 85 96 A E T < 5S+ 0 0 179 -3,-1.9 -3,-0.2 1,-0.2 -2,-0.1 0.811 70.4 133.6 58.4 39.2 13.3 -5.3 1.2 86 97 A H < - 0 0 39 -5,-2.3 -1,-0.2 -6,-0.1 -2,-0.1 -0.855 56.6-138.8-109.6 152.6 15.3 -2.2 0.4 87 98 A P + 0 0 61 0, 0.0 -5,-0.1 0, 0.0 -6,-0.1 0.413 49.5 147.5 -86.6 0.5 16.2 -1.0 -3.2 88 99 A L - 0 0 0 -7,-0.1 2,-0.5 1,-0.1 -6,-0.1 -0.081 36.2-150.3 -45.0 126.3 19.7 -0.0 -2.2 89 100 A L E -B 22 0A 81 -67,-0.6 -67,-2.5 -8,-0.1 2,-0.5 -0.900 14.1-170.7-110.6 124.3 22.0 -0.6 -5.1 90 101 A C E +B 21 0A 1 -2,-0.5 -69,-0.2 -69,-0.2 2,-0.2 -0.935 22.6 159.1-106.7 133.1 25.6 -1.5 -4.8 91 102 A T E -B 20 0A 58 -71,-2.4 -71,-2.8 -2,-0.5 2,-0.3 -0.732 28.6-116.0-143.4-174.5 27.6 -1.4 -8.0 92 103 A L E -B 19 0A 48 -73,-0.2 2,-0.3 -2,-0.2 -73,-0.2 -0.935 16.5-178.2-129.2 150.6 31.1 -1.1 -9.5 93 104 A E E -B 18 0A 74 -75,-1.9 -75,-3.0 -2,-0.3 2,-0.1 -0.971 38.5-104.1-144.1 145.7 33.2 1.2 -11.6 94 105 A K E B 17 0A 132 -2,-0.3 -77,-0.3 -77,-0.3 -79,-0.0 -0.374 360.0 360.0 -61.9 134.2 36.8 0.7 -12.7 95 106 A A 0 0 76 -79,-2.9 -78,-0.2 -2,-0.1 -1,-0.2 0.827 360.0 360.0 -76.1 360.0 39.3 2.8 -10.7 96 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 97 1 B L 0 0 10 0, 0.0 2,-0.5 0, 0.0 -72,-0.1 0.000 360.0 360.0 360.0 170.6 18.2 7.8 2.1 98 2 B V B -c 28 0B 65 -71,-2.4 -69,-2.8 -72,-0.0 -68,-0.4 -0.869 360.0-137.6-104.6 123.3 15.5 7.9 4.8 99 3 B K - 0 0 165 -2,-0.5 3,-0.1 -71,-0.2 2,-0.0 -0.537 25.0-112.7 -79.0 142.7 16.4 9.5 8.2 100 4 B S - 0 0 76 -2,-0.2 2,-0.2 1,-0.1 -1,-0.1 -0.289 38.3 -89.4 -71.8 157.3 15.2 7.7 11.3 101 5 B K - 0 0 162 1,-0.1 2,-0.1 -2,-0.0 -1,-0.1 -0.468 44.5-118.8 -64.1 132.0 12.5 9.2 13.6 102 6 B A - 0 0 86 -2,-0.2 2,-0.7 -3,-0.1 -1,-0.1 -0.477 22.8-127.8 -69.0 147.7 14.1 11.4 16.3 103 7 B T - 0 0 112 -2,-0.1 2,-0.1 2,-0.0 -1,-0.1 -0.885 25.6-123.2-106.4 111.3 13.4 10.2 19.8 104 8 B N - 0 0 125 -2,-0.7 -1,-0.0 1,-0.1 0, 0.0 -0.260 19.7-167.1 -65.0 128.7 12.0 12.9 22.0 105 9 B L + 0 0 155 -2,-0.1 2,-0.5 1,-0.1 -1,-0.1 0.829 66.6 73.4 -76.8 -34.7 13.8 13.8 25.1 106 10 B L 0 0 150 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.726 360.0 360.0-100.2 127.0 11.1 15.9 26.7 107 11 B Y 0 0 280 -2,-0.5 -2,-0.0 0, 0.0 0, 0.0 -0.969 360.0 360.0-123.6 360.0 7.9 14.6 28.3