==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PRION PROTEIN 27-MAR-03 1OEI . COMPND 2 MOLECULE: MAJOR PRION PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR R.ZAHN . 24 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1845.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 5 20.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 61 A H 0 0 116 0, 0.0 2,-2.0 0, 0.0 14,-0.1 0.000 360.0 360.0 360.0 53.4 3.1 -1.7 36.1 2 62 A G - 0 0 46 1,-0.2 4,-0.1 13,-0.1 5,-0.1 -0.169 360.0 -42.5 -66.2 38.4 3.8 -3.0 39.5 3 63 A G S S- 0 0 53 -2,-2.0 -1,-0.2 2,-0.1 0, 0.0 -0.009 100.3 -66.3 125.7 -22.1 7.5 -3.9 38.8 4 64 A G S S+ 0 0 46 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.478 108.7 66.4 135.8 8.7 7.5 -5.5 35.3 5 65 A W S S- 0 0 183 -3,-0.0 -2,-0.1 5,-0.0 -3,-0.0 0.562 107.9 -14.1-125.2-101.6 5.6 -8.8 35.4 6 66 A G S S+ 0 0 51 -4,-0.1 -3,-0.1 1,-0.1 9,-0.0 0.429 123.6 64.8 -98.2 -5.3 1.9 -9.6 36.1 7 67 A Q S > S+ 0 0 102 2,-0.1 3,-0.9 -5,-0.1 -1,-0.1 0.869 91.2 70.9 -81.9 -45.4 0.9 -6.2 37.5 8 68 A P T 3 S+ 0 0 26 0, 0.0 9,-0.1 0, 0.0 3,-0.1 -0.447 115.4 5.5 -62.5 150.3 1.6 -4.4 34.1 9 69 A H T 3 S+ 0 0 138 6,-0.7 2,-2.3 14,-0.3 -2,-0.1 0.715 79.3 175.9 38.8 41.7 -1.0 -5.3 31.4 10 70 A G S < S- 0 0 25 -3,-0.9 -1,-0.2 1,-0.2 4,-0.1 -0.193 73.0 -41.9 -67.2 42.2 -3.1 -7.3 34.0 11 71 A G S S- 0 0 53 -2,-2.3 -1,-0.2 1,-0.1 -2,-0.0 -0.028 102.6 -63.4 124.0 -20.8 -6.0 -8.0 31.5 12 72 A G S S+ 0 0 47 5,-0.0 5,-0.1 0, 0.0 -1,-0.1 0.385 109.2 58.7 142.9 1.0 -6.6 -4.8 29.6 13 73 A W S > S- 0 0 162 3,-0.1 4,-0.7 -3,-0.1 -4,-0.1 0.470 108.4 -5.2-127.1-112.0 -7.7 -2.0 31.9 14 74 A G T 4 S+ 0 0 59 1,-0.2 -3,-0.0 2,-0.1 -5,-0.0 0.363 125.6 61.8 -81.6 2.4 -6.3 -0.3 35.1 15 75 A Q T 4 S+ 0 0 83 -7,-0.1 -6,-0.7 -14,-0.1 -1,-0.2 0.739 116.4 28.0 -99.6 -39.7 -3.3 -2.7 35.1 16 76 A P T 4 S+ 0 0 6 0, 0.0 -2,-0.1 0, 0.0 -3,-0.1 0.816 110.2 72.8 -67.0 -94.3 -2.0 -1.6 31.7 17 77 A H < + 0 0 103 -4,-0.7 -4,-0.0 6,-0.2 5,-0.0 0.128 50.0 157.6 -32.0 112.0 -3.3 2.0 31.7 18 78 A G S S- 0 0 39 -3,-0.0 -1,-0.1 -17,-0.0 4,-0.1 -0.283 78.4 -37.2-135.5 36.0 -1.1 4.1 34.1 19 79 A G S S- 0 0 61 2,-0.1 -2,-0.1 1,-0.1 0, 0.0 -0.330 101.6 -67.1 137.2 -48.3 -1.5 7.7 32.9 20 80 A G S S+ 0 0 55 4,-0.0 -1,-0.1 0, 0.0 -3,-0.1 0.439 104.2 84.6 149.5 12.5 -1.6 7.6 29.0 21 81 A W S S- 0 0 181 0, 0.0 -2,-0.1 0, 0.0 -4,-0.1 0.552 102.7 -32.4-111.9-114.6 1.8 6.4 27.8 22 82 A G S S+ 0 0 70 1,-0.2 -5,-0.1 -4,-0.1 -3,-0.0 0.573 122.5 73.2 -95.6 -12.8 3.4 2.9 27.4 23 83 A Q 0 0 59 -5,-0.1 -14,-0.3 -7,-0.1 -6,-0.2 0.929 360.0 360.0 -58.2 -56.3 1.4 1.4 30.3 24 84 A P 0 0 81 0, 0.0 -11,-0.1 0, 0.0 -10,-0.1 -0.426 360.0 360.0 -63.6 360.0 -1.9 1.4 28.4