==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 03-FEB-07 2ORL . COMPND 2 MOLECULE: CYTOCHROME C ISO-1; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR M.ASSFALG,I.BERTINI,R.DEL CONTE,A.GIACHETTI,P.TURANO . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6041.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 53.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 31 28.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A T 0 0 143 0, 0.0 2,-0.3 0, 0.0 66,-0.1 0.000 360.0 360.0 360.0 -46.7 -9.2 -8.1 12.0 2 -4 A E + 0 0 95 2,-0.1 95,-0.1 0, 0.0 2,-0.0 -0.526 360.0 175.7-107.0 51.9 -12.7 -8.7 10.6 3 -3 A F - 0 0 73 -2,-0.3 2,-0.3 94,-0.1 91,-0.1 -0.273 12.1-177.8 -61.2 150.3 -11.4 -9.5 7.1 4 -2 A K - 0 0 117 90,-0.1 -2,-0.1 -2,-0.0 0, 0.0 -0.947 31.4-107.1-154.3 125.7 -13.9 -10.6 4.4 5 -1 A A - 0 0 86 -2,-0.3 93,-0.2 1,-0.1 92,-0.1 -0.247 39.7-177.9 -57.5 142.7 -12.9 -11.7 0.8 6 1 A G - 0 0 19 91,-0.4 2,-0.3 92,-0.2 -1,-0.1 0.007 22.6 -99.4-115.6-142.2 -13.7 -9.3 -2.0 7 2 A S >> - 0 0 56 91,-0.2 3,-2.3 1,-0.1 4,-1.7 -0.970 21.7-119.2-155.1 140.9 -13.4 -9.3 -5.8 8 3 A A H 3> S+ 0 0 48 -2,-0.3 4,-1.7 1,-0.3 5,-0.2 0.837 110.7 60.5 -49.6 -40.3 -10.9 -7.7 -8.3 9 4 A K H 34 S+ 0 0 160 1,-0.2 -1,-0.3 2,-0.2 4,-0.1 0.474 112.1 39.0 -72.9 3.2 -13.6 -5.5 -10.0 10 5 A K H <> S+ 0 0 90 -3,-2.3 4,-1.2 88,-0.2 3,-0.2 0.764 112.4 49.0-115.1 -53.5 -14.4 -3.7 -6.7 11 6 A G H X S+ 0 0 0 -4,-1.7 4,-2.4 87,-0.4 3,-0.2 0.878 108.7 58.0 -56.6 -38.1 -11.0 -3.2 -5.0 12 7 A A H X S+ 0 0 13 -4,-1.7 4,-3.1 -5,-0.3 -1,-0.2 0.910 99.2 55.8 -59.9 -49.5 -9.6 -1.8 -8.3 13 8 A T H 4 S+ 0 0 80 -3,-0.2 4,-0.3 -5,-0.2 -1,-0.2 0.879 113.5 43.1 -52.1 -38.2 -12.2 1.1 -8.5 14 9 A L H >< S+ 0 0 61 -4,-1.2 3,-1.8 -3,-0.2 5,-0.3 0.981 116.9 43.7 -71.0 -59.3 -11.1 2.3 -5.0 15 10 A F H >X>S+ 0 0 8 -4,-2.4 5,-3.1 1,-0.3 4,-2.1 0.844 109.5 59.5 -53.6 -38.2 -7.3 1.9 -5.5 16 11 A K T 3<5S+ 0 0 91 -4,-3.1 -1,-0.3 1,-0.2 -2,-0.2 0.586 118.6 28.8 -71.5 -9.8 -7.7 3.5 -9.0 17 12 A T T <45S+ 0 0 103 -3,-1.8 -1,-0.2 -4,-0.3 -2,-0.2 -0.009 132.6 33.8-138.1 22.6 -9.2 6.8 -7.5 18 13 A R T <45S+ 0 0 89 -3,-1.0 -3,-0.2 -4,-0.1 -2,-0.2 0.476 132.9 17.1-143.0 -42.6 -7.5 6.7 -4.0 19 14 A C T >X5S+ 0 0 24 -4,-2.1 4,-2.4 -5,-0.3 3,-1.5 0.670 108.2 75.5-112.1 -30.0 -4.0 5.1 -4.4 20 15 A L T 34 + 0 0 27 -13,-1.8 3,-2.0 -2,-0.3 2,-1.0 0.531 48.5 116.5 -99.3 -12.8 3.4 -1.7 -4.8 38 33 A H T 3 S+ 0 0 55 -14,-0.6 -12,-0.1 -12,-0.3 -2,-0.1 -0.458 88.7 12.4 -65.0 93.5 3.4 -4.7 -7.3 39 34 A G T 3 S+ 0 0 16 -2,-1.0 -1,-0.3 64,-0.1 -2,-0.1 0.499 83.3 124.3 115.6 9.5 5.1 -7.5 -5.2 40 35 A I X + 0 0 20 -3,-2.0 3,-2.7 2,-0.1 24,-0.3 0.895 44.4 102.9 -66.1 -37.8 5.0 -6.0 -1.6 41 36 A F T 3 S+ 0 0 39 -4,-0.3 24,-0.2 1,-0.3 3,-0.1 -0.243 92.0 16.5 -53.0 114.8 3.1 -9.1 -0.2 42 37 A G T 3 S+ 0 0 56 22,-2.4 -1,-0.3 1,-0.4 2,-0.2 0.264 111.0 94.1 103.3 -5.9 5.7 -11.2 1.6 43 38 A R S < S- 0 0 64 -3,-2.7 21,-2.4 21,-0.3 -1,-0.4 -0.637 74.7-105.9-111.2 169.8 8.4 -8.4 1.9 44 39 A H B -B 63 0B 78 19,-0.2 19,-0.2 -2,-0.2 3,-0.2 -0.538 48.8 -77.1 -93.4 163.0 9.3 -5.9 4.5 45 40 A S S S+ 0 0 2 17,-0.8 16,-0.3 1,-0.2 -1,-0.1 -0.216 111.0 34.4 -59.5 144.9 8.6 -2.1 4.4 46 41 A G S S+ 0 0 24 -3,-0.1 -1,-0.2 14,-0.1 7,-0.1 0.901 73.9 124.4 79.2 45.2 10.9 -0.0 2.2 47 42 A Q + 0 0 78 -3,-0.2 -2,-0.1 5,-0.1 5,-0.1 0.175 24.1 147.4-122.0 22.0 11.7 -2.4 -0.8 48 43 A A > - 0 0 14 3,-0.2 2,-1.8 1,-0.1 3,-1.2 -0.314 55.0-117.2 -62.5 132.3 10.7 -0.5 -4.0 49 44 A E T 3 S- 0 0 88 1,-0.2 -1,-0.1 -13,-0.1 -18,-0.1 -0.496 99.2 -2.3 -73.5 80.1 12.8 -1.3 -7.1 50 45 A G T 3 S+ 0 0 70 -2,-1.8 2,-0.3 1,-0.3 -1,-0.2 0.713 110.1 99.7 109.9 29.7 14.4 2.2 -7.8 51 46 A Y < - 0 0 59 -3,-1.2 -1,-0.3 -15,-0.1 2,-0.2 -0.995 61.7-125.4-147.4 137.8 12.8 4.5 -5.1 52 47 A S - 0 0 94 -2,-0.3 2,-0.2 -5,-0.1 -5,-0.1 -0.552 20.0-158.4 -85.3 148.1 13.9 5.9 -1.7 53 48 A Y - 0 0 51 -2,-0.2 2,-0.1 -7,-0.1 -1,-0.0 -0.639 24.6 -92.5-117.5 166.3 12.0 5.6 1.7 54 49 A T > - 0 0 34 -2,-0.2 4,-1.8 1,-0.1 3,-0.3 -0.416 34.8-106.7 -79.9 164.1 12.1 7.6 5.0 55 50 A D H > S+ 0 0 117 1,-0.2 4,-1.2 2,-0.2 -1,-0.1 0.827 120.9 45.9 -56.1 -34.7 14.2 7.0 8.2 56 51 A A H 4 S+ 0 0 22 25,-0.2 4,-0.4 2,-0.2 -1,-0.2 0.782 107.7 53.6 -82.7 -33.4 11.1 5.7 10.0 57 52 A N H > S+ 0 0 6 -3,-0.3 4,-0.7 2,-0.2 5,-0.4 0.902 112.1 45.2 -72.3 -38.0 9.6 3.4 7.2 58 53 A I H >< S+ 0 0 82 -4,-1.8 3,-2.2 1,-0.2 -2,-0.2 0.999 109.7 51.1 -67.4 -68.5 12.9 1.4 6.8 59 54 A K T 3< S+ 0 0 147 -4,-1.2 -1,-0.2 1,-0.3 -2,-0.2 0.641 107.1 62.0 -36.4 -22.1 13.7 0.9 10.6 60 55 A K T 34 S+ 0 0 61 -4,-0.4 -1,-0.3 -3,-0.2 -2,-0.2 0.792 72.9 178.4 -80.6 -36.3 10.0 -0.4 10.7 61 56 A N << - 0 0 79 -3,-2.2 -3,-0.1 -4,-0.7 2,-0.1 0.674 14.0-173.8 32.3 45.5 10.6 -3.4 8.2 62 57 A V - 0 0 13 -5,-0.4 2,-1.0 -18,-0.1 -17,-0.8 -0.414 27.8-122.4 -66.2 134.4 6.9 -4.5 8.6 63 58 A L B -B 44 0B 89 -19,-0.2 2,-0.6 -2,-0.1 -19,-0.2 -0.711 27.4-130.7 -82.4 100.4 6.2 -7.8 6.8 64 59 A W + 0 0 25 -21,-2.4 -22,-2.4 -2,-1.0 -21,-0.3 -0.404 45.5 157.1 -58.4 104.5 3.4 -6.8 4.4 65 60 A D > - 0 0 74 -2,-0.6 4,-1.3 -24,-0.2 5,-0.1 -0.445 56.7 -86.1-116.6-173.9 0.7 -9.5 4.9 66 61 A E T 4 S+ 0 0 51 -2,-0.2 4,-0.5 2,-0.2 34,-0.0 0.977 127.3 25.0 -64.8 -55.9 -3.1 -9.7 4.3 67 62 A N T >> S+ 0 0 77 1,-0.2 3,-1.4 2,-0.2 4,-1.1 0.938 116.6 63.0 -76.7 -47.2 -4.1 -8.1 7.7 68 63 A N H 3> S+ 0 0 14 1,-0.3 4,-1.3 2,-0.2 3,-0.2 0.829 92.4 64.5 -48.3 -41.5 -0.9 -6.1 8.3 69 64 A M H 3X S+ 0 0 15 -4,-1.3 4,-1.9 1,-0.2 -1,-0.3 0.891 103.8 48.2 -53.0 -38.6 -1.4 -3.9 5.1 70 65 A S H <> S+ 0 0 7 -3,-1.4 4,-2.4 -4,-0.5 -1,-0.2 0.868 98.9 68.2 -68.2 -36.9 -4.6 -2.5 6.8 71 66 A E H X S+ 0 0 85 -4,-1.1 4,-0.6 -3,-0.2 -1,-0.2 0.916 112.6 31.2 -46.0 -52.0 -2.7 -1.8 10.1 72 67 A Y H < S+ 0 0 21 -4,-1.3 3,-0.4 1,-0.2 -1,-0.2 0.824 112.9 63.3 -77.5 -37.9 -0.7 0.9 8.3 73 68 A L H < S+ 0 0 35 -4,-1.9 17,-0.4 -5,-0.2 -2,-0.2 0.861 95.7 59.7 -58.4 -38.7 -3.5 2.0 5.9 74 69 A T H < S- 0 0 41 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.892 133.0 -4.7 -57.8 -39.3 -5.8 3.1 8.8 75 70 A N X + 0 0 71 -4,-0.6 4,-1.7 -3,-0.4 3,-0.3 -0.598 60.2 176.7-159.2 90.0 -3.1 5.7 9.8 76 71 A P H > S+ 0 0 3 0, 0.0 4,-2.6 0, 0.0 7,-0.2 0.851 87.2 54.8 -62.3 -34.8 0.3 5.8 8.1 77 72 A K H 4 S+ 0 0 90 1,-0.2 5,-0.1 2,-0.2 6,-0.1 0.821 108.1 47.9 -69.0 -35.6 1.4 8.9 10.2 78 73 A K H 4 S+ 0 0 156 -3,-0.3 -1,-0.2 -6,-0.1 -6,-0.1 0.861 119.7 37.5 -74.9 -37.7 0.7 7.1 13.5 79 74 A Y H < S+ 0 0 62 -4,-1.7 -2,-0.2 1,-0.3 -1,-0.1 0.875 131.3 26.8 -79.1 -43.3 2.5 3.9 12.6 80 75 A I S >< S- 0 0 1 -4,-2.6 3,-1.7 -5,-0.2 2,-0.4 -0.848 83.0-152.4-124.6 89.1 5.4 5.5 10.6 81 76 A P T 3 S+ 0 0 90 0, 0.0 -25,-0.2 0, 0.0 -4,-0.1 -0.482 82.0 17.8 -67.1 117.6 6.0 9.1 12.0 82 77 A G T 3 S+ 0 0 62 -2,-0.4 -27,-0.1 1,-0.3 -5,-0.1 0.312 87.5 152.0 104.6 -6.7 7.4 11.3 9.3 83 78 A T < - 0 0 9 -3,-1.7 -1,-0.3 -7,-0.2 -3,-0.0 -0.245 52.1-127.2 -60.0 144.3 6.5 9.1 6.3 84 79 A K S S+ 0 0 104 1,-0.1 2,-0.9 2,-0.1 -1,-0.1 0.711 81.7 102.7 -65.3 -23.7 5.9 10.7 2.8 85 80 A M + 0 0 38 1,-0.2 3,-0.2 -9,-0.1 -2,-0.1 -0.499 37.4 163.5 -71.6 103.3 2.5 9.0 2.4 86 81 A A + 0 0 82 -2,-0.9 -1,-0.2 1,-0.2 -2,-0.1 0.174 29.4 124.7-108.8 21.0 -0.0 11.8 3.2 87 82 A F S S- 0 0 46 1,-0.1 -1,-0.2 -68,-0.0 -2,-0.0 0.603 76.7-117.5 -54.9 -25.2 -3.1 10.0 1.7 88 83 A G - 0 0 53 -3,-0.2 -1,-0.1 2,-0.0 3,-0.1 -0.101 45.0 -99.5 109.3 -37.4 -5.2 10.3 4.9 89 84 A G - 0 0 9 -14,-0.1 2,-1.3 1,-0.1 -15,-0.2 0.736 25.8-106.6 85.6 116.6 -5.7 6.6 5.7 90 85 A L - 0 0 40 -17,-0.4 6,-0.1 1,-0.2 -15,-0.1 -0.564 34.0-173.8 -77.4 94.1 -8.9 4.5 4.9 91 86 A K + 0 0 121 -2,-1.3 2,-0.8 -17,-0.1 -1,-0.2 0.760 58.3 91.1 -57.3 -36.0 -10.4 4.1 8.4 92 87 A K > - 0 0 131 1,-0.2 4,-1.4 2,-0.0 3,-0.4 -0.586 57.8-166.7 -74.6 105.9 -13.2 1.7 7.2 93 88 A E H > S+ 0 0 33 -2,-0.8 4,-2.4 1,-0.2 -1,-0.2 0.838 86.0 58.8 -58.9 -39.9 -12.0 -1.9 7.5 94 89 A K H > S+ 0 0 99 1,-0.2 4,-1.1 2,-0.2 -1,-0.2 0.900 106.2 50.7 -58.5 -39.2 -14.8 -3.4 5.3 95 90 A D H > S+ 0 0 52 -3,-0.4 4,-1.1 1,-0.2 -1,-0.2 0.860 111.0 47.0 -66.2 -40.8 -13.7 -1.1 2.5 96 91 A R H X S+ 0 0 16 -4,-1.4 4,-2.3 2,-0.2 -2,-0.2 0.857 98.9 70.7 -71.7 -36.3 -10.0 -2.3 2.8 97 92 A N H X S+ 0 0 6 -4,-2.4 4,-1.4 1,-0.2 -91,-0.4 0.920 104.1 40.4 -44.1 -55.0 -11.1 -6.0 2.9 98 93 A D H X S+ 0 0 31 -4,-1.1 4,-1.6 1,-0.2 -87,-0.4 0.863 111.1 59.1 -62.8 -39.2 -12.0 -5.8 -0.8 99 94 A L H X S+ 0 0 9 -4,-1.1 4,-1.9 1,-0.2 -2,-0.2 0.879 102.9 52.7 -57.6 -39.4 -8.9 -3.7 -1.6 100 95 A I H X S+ 0 0 1 -4,-2.3 4,-3.5 -3,-0.2 5,-0.2 0.928 104.5 55.4 -64.9 -45.3 -6.6 -6.5 -0.3 101 96 A T H X S+ 0 0 22 -4,-1.4 4,-2.2 1,-0.2 -1,-0.2 0.901 108.5 48.4 -55.1 -45.7 -8.2 -9.1 -2.5 102 97 A Y H X S+ 0 0 29 -4,-1.6 4,-1.2 -95,-0.2 -1,-0.2 0.960 117.2 39.6 -59.9 -56.4 -7.5 -7.0 -5.7 103 98 A L H X S+ 0 0 7 -4,-1.9 4,-2.0 1,-0.2 3,-0.5 0.909 113.8 55.9 -58.2 -44.4 -3.8 -6.4 -4.8 104 99 A K H X S+ 0 0 41 -4,-3.5 4,-2.3 1,-0.2 -1,-0.2 0.886 107.3 49.7 -54.2 -41.9 -3.5 -9.9 -3.6 105 100 A K H < S+ 0 0 110 -4,-2.2 -1,-0.2 -5,-0.2 -2,-0.2 0.759 111.3 49.1 -69.3 -30.0 -4.7 -11.2 -7.1 106 101 A A H < S+ 0 0 38 -4,-1.2 -1,-0.2 -3,-0.5 -2,-0.2 0.740 116.5 41.0 -78.5 -34.7 -2.2 -8.9 -8.8 107 102 A T H < 0 0 43 -4,-2.0 -2,-0.2 1,-0.2 -3,-0.2 0.818 360.0 360.0 -83.7 -40.6 0.8 -10.1 -6.7 108 103 A E < 0 0 149 -4,-2.3 -1,-0.2 -5,-0.2 -69,-0.0 -0.989 360.0 360.0-125.1 360.0 -0.2 -13.8 -6.6