==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-SEP-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 25-OCT-10 3PDV . COMPND 2 MOLECULE: PDZ AND LIM DOMAIN PROTEIN 2, C-TEMINAL PEPTIDE F . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, INFLUENZA A VIRUS; . AUTHOR X.LI . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5742.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 65.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 30.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 11.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 110 0, 0.0 81,-3.3 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 120.0 21.7 -9.8 -32.0 2 2 A A E +A 81 0A 74 79,-0.2 2,-0.3 77,-0.0 79,-0.2 -0.676 360.0 164.8 -79.7 133.0 21.5 -12.8 -29.7 3 3 A L E -A 80 0A 33 77,-2.3 77,-3.7 -2,-0.4 2,-0.5 -0.987 33.9-137.6-148.4 161.8 18.9 -12.5 -26.8 4 4 A T E -A 79 0A 92 -2,-0.3 2,-0.5 75,-0.2 75,-0.2 -0.965 23.1-171.5-123.7 111.4 17.1 -14.5 -24.2 5 5 A V E -A 78 0A 9 73,-2.5 73,-3.2 -2,-0.5 2,-0.6 -0.902 10.7-157.6-109.9 129.1 13.4 -13.6 -23.7 6 6 A D E -A 77 0A 91 -2,-0.5 2,-0.5 71,-0.2 71,-0.2 -0.933 13.2-155.4-104.1 119.9 11.2 -15.0 -20.9 7 7 A V E -A 76 0A 0 69,-3.6 69,-2.9 -2,-0.6 2,-0.2 -0.849 12.5-131.5-101.8 122.9 7.5 -15.0 -21.7 8 8 A A + 0 0 69 -2,-0.5 33,-0.1 29,-0.4 32,-0.1 -0.493 51.8 76.4 -71.2 137.4 5.0 -14.9 -18.9 9 9 A G - 0 0 28 -2,-0.2 2,-0.2 2,-0.1 -1,-0.1 -0.202 69.5-113.2-115.8-156.1 2.2 -17.4 -19.2 10 10 A P S S- 0 0 88 0, 0.0 27,-0.1 0, 0.0 60,-0.0 0.596 75.4 -65.8 -85.1-173.1 0.4 -19.6 -19.4 11 11 A A S S+ 0 0 33 61,-0.3 2,-0.1 59,-0.2 -2,-0.1 -0.374 99.0 81.9 -62.2 150.2 -0.6 -20.2 -23.0 12 12 A P - 0 0 88 0, 0.0 25,-0.4 0, 0.0 58,-0.0 0.163 63.3-174.0 -72.0 132.0 -2.1 -18.8 -25.2 13 13 A W - 0 0 10 2,-0.1 25,-1.7 24,-0.1 24,-0.2 0.803 30.9-126.3 -73.9 -32.3 1.2 -17.0 -25.7 14 14 A G + 0 0 23 1,-0.3 19,-2.1 23,-0.2 2,-0.3 0.874 68.7 92.7 87.0 40.5 -0.0 -14.5 -28.3 15 15 A F E -B 32 0A 32 17,-0.2 2,-0.3 23,-0.1 -1,-0.3 -0.951 60.2-128.0-148.1 172.7 2.4 -15.0 -31.2 16 16 A R E -B 31 0A 151 15,-2.3 14,-2.3 -2,-0.3 15,-0.8 -0.947 15.7-156.6-124.9 145.8 2.8 -16.9 -34.5 17 17 A I E -B 29 0A 30 -2,-0.3 2,-0.3 12,-0.2 12,-0.2 -0.909 4.7-168.5-120.3 149.6 5.7 -19.1 -35.8 18 18 A T E +B 28 0A 68 10,-2.6 10,-2.5 -2,-0.3 -2,-0.0 -0.874 46.2 24.2-122.9 162.6 6.8 -20.1 -39.2 19 19 A G E + 0 0 2 -2,-0.3 2,-0.2 8,-0.2 8,-0.2 -0.127 45.1 167.5 87.8-174.1 9.4 -22.7 -40.4 20 20 A G E > > -B 25 0A 2 5,-1.4 5,-1.9 6,-0.1 3,-1.4 -0.757 57.0 -64.5 141.2 171.3 11.0 -25.9 -39.1 21 21 A R G > 5S+ 0 0 135 39,-3.0 3,-0.9 1,-0.3 40,-0.2 0.831 126.7 59.1 -59.0 -37.0 13.1 -28.9 -40.2 22 22 A D G 3 5S+ 0 0 77 1,-0.3 -1,-0.3 38,-0.1 39,-0.1 0.697 112.3 40.2 -67.6 -19.0 10.3 -30.2 -42.6 23 23 A F G < 5S- 0 0 129 -3,-1.4 -1,-0.3 2,-0.3 -2,-0.2 0.374 110.4-126.4-102.5 -1.2 10.4 -26.8 -44.4 24 24 A H T < 5S+ 0 0 169 -3,-0.9 -3,-0.2 -4,-0.5 -2,-0.1 0.752 75.6 109.2 60.4 28.5 14.2 -26.8 -44.2 25 25 A T E > S- 0 0 28 -2,-0.7 4,-1.0 1,-0.1 3,-0.5 -0.955 86.4 -90.1 174.7 168.7 -1.1 -10.7 -25.5 37 37 A K H 3> S+ 0 0 66 -25,-0.4 4,-1.2 -2,-0.3 -29,-0.4 0.812 117.3 56.7 -70.2 -32.6 1.6 -12.1 -23.4 38 38 A A H 34>S+ 0 0 0 -25,-1.7 5,-1.6 1,-0.2 4,-0.3 0.752 99.6 60.9 -70.8 -25.4 4.3 -12.0 -26.0 39 39 A K H X45S+ 0 0 56 -3,-0.5 3,-0.7 -6,-0.4 -1,-0.2 0.891 107.9 43.7 -67.0 -40.1 3.8 -8.2 -26.5 40 40 A D H 3<5S+ 0 0 136 -4,-1.0 -2,-0.2 1,-0.2 -1,-0.2 0.839 106.5 63.9 -68.1 -33.3 4.7 -7.6 -22.8 41 41 A A T 3<5S- 0 0 18 -4,-1.2 -35,-0.2 -33,-0.1 -1,-0.2 0.429 111.7-110.7 -81.2 -3.5 7.7 -10.0 -23.1 42 42 A D T < 5 + 0 0 120 -3,-0.7 2,-0.4 -4,-0.3 -3,-0.2 0.879 62.2 154.0 76.7 40.3 9.7 -8.0 -25.6 43 43 A L < - 0 0 12 -5,-1.6 -1,-0.3 -38,-0.0 -11,-0.0 -0.850 25.1-158.3-104.1 141.3 9.3 -10.4 -28.5 44 44 A R > - 0 0 118 -2,-0.4 3,-2.2 -13,-0.1 -15,-0.2 -0.944 24.8-102.5-128.0 135.8 9.5 -9.1 -32.1 45 45 A P T 3 S+ 0 0 65 0, 0.0 -15,-0.2 0, 0.0 3,-0.1 -0.293 110.2 32.2 -48.5 130.3 8.3 -10.3 -35.5 46 46 A G T 3 S+ 0 0 32 -17,-3.6 2,-0.1 1,-0.4 -16,-0.1 0.228 80.8 139.8 99.9 -15.5 11.3 -11.7 -37.4 47 47 A D < - 0 0 0 -3,-2.2 -18,-3.0 35,-0.1 2,-0.4 -0.458 48.9-136.3 -58.5 129.4 13.0 -13.1 -34.3 48 48 A I E -CD 28 81A 49 33,-2.6 33,-2.0 -20,-0.2 2,-0.9 -0.802 12.1-132.3 -86.5 131.4 14.5 -16.5 -35.1 49 49 A I E +CD 27 80A 4 -22,-2.8 -22,-0.5 -2,-0.4 31,-0.2 -0.791 30.6 171.4 -89.8 106.0 14.0 -19.1 -32.3 50 50 A V E + 0 0 66 29,-2.4 7,-2.7 -2,-0.9 8,-0.6 0.783 68.6 9.6 -80.1 -34.4 17.3 -20.7 -31.7 51 51 A A E -ED 56 79A 13 28,-1.4 28,-2.2 5,-0.3 2,-0.5 -0.998 58.8-147.0-153.7 143.8 16.2 -22.6 -28.6 52 52 A I E > S-ED 55 78A 3 3,-3.1 3,-2.0 -2,-0.3 26,-0.2 -0.967 86.7 -22.2-117.1 117.5 13.0 -23.4 -26.7 53 53 A N T 3 S- 0 0 69 24,-3.5 -1,-0.2 -2,-0.5 25,-0.1 0.877 129.6 -48.9 48.5 44.4 13.3 -23.7 -22.9 54 54 A G T 3 S+ 0 0 79 23,-0.4 2,-0.5 1,-0.2 -1,-0.3 0.363 116.4 115.5 81.9 -5.0 17.0 -24.4 -23.2 55 55 A E E < S-E 52 0A 89 -3,-2.0 -3,-3.1 1,-0.0 -1,-0.2 -0.858 74.7-107.5-100.1 131.8 16.5 -27.1 -25.9 56 56 A S E -E 51 0A 68 -2,-0.5 -5,-0.3 -5,-0.2 3,-0.2 -0.265 21.6-161.9 -59.3 133.5 17.9 -26.4 -29.4 57 57 A A > + 0 0 4 -7,-2.7 3,-1.5 1,-0.2 -6,-0.2 0.482 63.9 103.2 -91.5 -2.9 15.1 -25.6 -32.0 58 58 A E T 3 S+ 0 0 174 -8,-0.6 -1,-0.2 1,-0.3 -38,-0.1 0.827 89.1 28.3 -52.5 -48.5 17.5 -26.4 -34.9 59 59 A G T 3 S+ 0 0 38 -3,-0.2 -1,-0.3 -39,-0.1 2,-0.2 0.215 91.6 124.3-102.5 14.3 16.1 -29.8 -35.9 60 60 A M < - 0 0 2 -3,-1.5 -39,-3.0 -39,-0.1 -38,-0.1 -0.540 59.5-127.0 -75.8 138.4 12.6 -29.4 -34.7 61 61 A L > - 0 0 59 -41,-0.3 4,-2.6 -2,-0.2 5,-0.3 -0.430 30.5-106.1 -71.8 157.7 9.7 -29.9 -37.2 62 62 A H H > S+ 0 0 47 1,-0.2 4,-2.3 2,-0.2 5,-0.1 0.955 122.8 42.9 -48.6 -58.7 7.2 -27.1 -37.4 63 63 A A H > S+ 0 0 57 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.807 112.3 56.3 -59.5 -32.7 4.5 -29.0 -35.5 64 64 A E H > S+ 0 0 69 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.945 110.5 41.4 -65.2 -51.4 7.2 -30.2 -33.0 65 65 A A H X S+ 0 0 0 -4,-2.6 4,-2.0 2,-0.2 -2,-0.2 0.872 114.4 55.1 -61.7 -38.6 8.3 -26.6 -32.1 66 66 A Q H X S+ 0 0 99 -4,-2.3 4,-2.1 -5,-0.3 -2,-0.2 0.932 110.6 44.4 -57.9 -48.4 4.6 -25.6 -32.1 67 67 A S H X S+ 0 0 50 -4,-2.4 4,-2.1 2,-0.2 -2,-0.2 0.866 110.7 52.7 -68.9 -39.6 3.8 -28.3 -29.6 68 68 A K H < S+ 0 0 72 -4,-2.3 4,-0.3 2,-0.2 -1,-0.2 0.877 112.1 47.1 -64.2 -37.8 6.7 -27.7 -27.3 69 69 A I H >< S+ 0 0 9 -4,-2.0 3,-0.8 2,-0.2 -2,-0.2 0.911 114.3 45.8 -67.4 -45.3 5.8 -24.0 -27.1 70 70 A R H 3< S+ 0 0 171 -4,-2.1 -59,-0.2 1,-0.2 -2,-0.2 0.796 115.8 46.1 -72.4 -28.9 2.1 -24.7 -26.4 71 71 A Q T 3< S+ 0 0 154 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.466 90.6 124.3 -86.5 -3.8 2.9 -27.3 -23.8 72 72 A S < - 0 0 15 -3,-0.8 -61,-0.3 -4,-0.3 4,-0.1 -0.209 59.5-124.9 -65.8 143.6 5.5 -25.1 -22.1 73 73 A P - 0 0 97 0, 0.0 -1,-0.1 0, 0.0 -20,-0.0 -0.238 53.0 -56.1 -67.6 171.2 5.5 -24.1 -18.4 74 74 A S S S+ 0 0 65 2,-0.1 -66,-0.1 1,-0.1 2,-0.1 -0.859 118.3 38.3 -97.7 136.0 5.6 -20.5 -17.4 75 75 A P S S- 0 0 65 0, 0.0 2,-0.6 0, 0.0 -67,-0.2 0.583 80.6-142.2 -82.5 160.5 7.7 -18.6 -18.2 76 76 A L E -A 7 0A 0 -69,-2.9 -69,-3.6 -4,-0.1 2,-0.7 -0.769 17.8-152.0 -78.5 119.8 8.4 -19.6 -21.8 77 77 A R E -A 6 0A 25 -2,-0.6 -24,-3.5 -71,-0.2 2,-0.5 -0.869 16.9-178.1-100.0 113.2 12.2 -19.2 -22.2 78 78 A L E -AD 5 52A 1 -73,-3.2 -73,-2.5 -2,-0.7 2,-0.5 -0.928 21.1-151.6-112.5 130.6 13.2 -18.4 -25.8 79 79 A Q E -AD 4 51A 66 -28,-2.2 -29,-2.4 -2,-0.5 -28,-1.4 -0.911 33.7-171.0 -92.9 127.2 16.8 -18.0 -27.1 80 80 A L E -AD 3 49A 1 -77,-3.7 -77,-2.3 -2,-0.5 2,-0.5 -0.819 31.5-150.2-125.3 153.7 16.5 -15.6 -30.0 81 81 A D E -AD 2 48A 77 -33,-2.0 -33,-2.6 -2,-0.3 2,-0.4 -0.993 26.3-166.6-121.1 122.4 18.4 -14.1 -32.9 82 82 A R - 0 0 37 -81,-3.3 2,-0.7 -2,-0.5 -35,-0.1 -0.893 19.5-130.0-115.9 137.7 17.2 -10.6 -33.8 83 83 A S - 0 0 88 -2,-0.4 2,-0.1 -37,-0.1 -36,-0.0 -0.775 28.2-154.7 -89.3 112.8 17.9 -8.6 -36.9 84 84 A T - 0 0 84 -2,-0.7 2,-0.3 1,-0.0 -1,-0.0 -0.452 3.7-142.2 -86.8 155.7 19.0 -5.1 -35.9 85 85 A I - 0 0 133 -2,-0.1 2,-0.4 2,-0.0 -1,-0.0 -0.888 8.2-161.2-121.1 152.7 18.7 -1.9 -38.1 86 86 A E - 0 0 188 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.999 8.8-163.7-131.0 130.9 20.9 1.1 -38.7 87 87 A S - 0 0 100 -2,-0.4 2,-0.3 0, 0.0 -2,-0.0 -0.937 15.9-131.9-119.0 139.2 19.6 4.4 -40.2 88 88 A E 0 0 200 -2,-0.4 -2,-0.0 0, 0.0 0, 0.0 -0.654 360.0 360.0 -84.7 138.0 21.7 7.3 -41.6 89 89 A V 0 0 208 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.891 360.0 360.0-128.6 360.0 20.8 10.8 -40.4