==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PLASMINOGEN 03-AUG-93 1PKR . COMPND 2 MOLECULE: PLASMINOGEN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.-P.WU,A.TULINSKY . 80 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4745.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 29 36.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 12.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A E 0 0 134 0, 0.0 2,-0.3 0, 0.0 77,-0.2 0.000 360.0 360.0 360.0 101.1 42.1 -3.2 3.4 2 1 A a - 0 0 52 75,-0.1 2,-0.3 2,-0.1 77,-0.2 -0.912 360.0-126.9-156.8 160.6 39.0 -5.3 3.5 3 2 A K B +a 79 0A 48 75,-3.2 77,-3.1 -2,-0.3 2,-0.3 -0.833 20.6 177.9-118.2 157.9 37.8 -7.7 6.0 4 3 A T > - 0 0 104 -2,-0.3 3,-0.7 76,-0.2 5,-0.3 -0.872 64.1 -10.0-157.0 124.4 36.7 -11.3 5.9 5 4 A G T 3 S- 0 0 55 -2,-0.3 75,-0.1 1,-0.2 -2,-0.0 -0.461 127.7 -25.3 82.0-155.7 35.6 -13.2 9.0 6 5 A N T 3 S- 0 0 38 -2,-0.2 -1,-0.2 54,-0.1 51,-0.1 0.383 95.9-106.5 -71.9 2.5 36.1 -11.8 12.5 7 6 A G S X S+ 0 0 2 -3,-0.7 3,-0.8 53,-0.2 -2,-0.2 0.815 70.4 151.8 74.6 36.6 38.9 -9.8 10.7 8 7 A K T 3 S+ 0 0 46 -4,-0.3 45,-0.3 1,-0.2 48,-0.1 0.817 72.4 37.5 -64.1 -39.9 41.6 -12.0 12.3 9 8 A N T 3 S+ 0 0 144 -5,-0.3 2,-0.4 43,-0.1 -1,-0.2 0.290 85.3 139.0 -97.2 8.3 44.3 -11.7 9.6 10 9 A Y < + 0 0 12 -3,-0.8 43,-0.2 1,-0.1 -7,-0.1 -0.488 20.1 166.9 -63.0 114.5 43.4 -8.1 9.0 11 10 A R + 0 0 99 -2,-0.4 -1,-0.1 41,-0.1 41,-0.1 -0.232 32.2 139.3-119.4 34.9 46.5 -6.1 8.5 12 11 A G - 0 0 8 39,-0.2 38,-0.1 -10,-0.1 65,-0.0 0.098 58.5-117.7 -66.8-175.1 44.6 -3.1 7.1 13 12 A T + 0 0 70 37,-0.1 2,-0.2 36,-0.0 36,-0.1 0.211 60.2 129.9-118.9 10.9 45.3 0.6 7.8 14 13 A M + 0 0 57 37,-0.2 37,-2.0 1,-0.1 63,-0.0 -0.550 24.5 175.3 -71.1 137.8 42.1 2.0 9.6 15 14 A S + 0 0 43 35,-0.2 8,-2.7 -2,-0.2 2,-0.3 0.004 52.9 71.9-133.0 20.8 42.8 3.9 12.8 16 15 A K B S-B 22 0B 110 6,-0.3 60,-0.3 49,-0.0 6,-0.3 -0.948 75.0-117.2-137.0 150.8 39.4 5.2 13.9 17 16 A T > - 0 0 4 4,-3.7 3,-2.1 -2,-0.3 58,-0.3 -0.296 41.8 -85.5 -83.6 177.6 36.5 3.4 15.3 18 17 A K T 3 S+ 0 0 120 56,-2.5 57,-0.1 1,-0.3 -1,-0.1 0.622 129.2 52.1 -55.0 -18.7 33.0 3.0 13.9 19 18 A N T 3 S- 0 0 117 55,-0.3 -1,-0.3 2,-0.2 3,-0.1 -0.038 120.3-106.2-111.8 23.8 32.0 6.4 15.5 20 19 A G S < S+ 0 0 48 -3,-2.1 2,-0.5 1,-0.2 -2,-0.1 0.656 75.1 137.1 57.4 26.2 34.9 8.2 13.9 21 20 A I - 0 0 49 46,-0.0 -4,-3.7 1,-0.0 -1,-0.2 -0.854 57.0-110.1-104.7 134.6 36.9 8.5 17.1 22 21 A T B -B 16 0B 75 -2,-0.5 44,-0.8 -6,-0.3 -6,-0.3 -0.424 27.9-112.6 -73.0 135.6 40.6 7.8 16.6 23 22 A b B -C 65 0C 3 -8,-2.7 2,-0.3 26,-0.3 42,-0.3 -0.211 23.4-121.2 -63.8 149.0 42.4 4.8 18.0 24 23 A Q - 0 0 4 40,-3.3 40,-0.4 1,-0.1 -1,-0.1 -0.747 38.4 -97.1 -92.3 139.1 45.1 4.9 20.7 25 24 A K - 0 0 82 -2,-0.3 3,-0.2 1,-0.2 24,-0.2 -0.408 26.1-137.6 -60.8 132.8 48.5 3.5 19.8 26 25 A W S S+ 0 0 0 22,-1.4 -1,-0.2 1,-0.2 23,-0.1 0.560 106.0 54.8 -64.3 -17.9 48.7 -0.1 21.1 27 26 A S S S+ 0 0 72 21,-0.4 -1,-0.2 10,-0.1 22,-0.1 0.819 96.1 83.7 -84.6 -36.0 52.2 0.7 22.3 28 27 A S - 0 0 45 -3,-0.2 -4,-0.1 1,-0.1 4,-0.0 -0.122 66.6-149.6 -65.3 156.5 51.0 3.7 24.4 29 28 A T + 0 0 80 4,-0.2 -1,-0.1 2,-0.0 4,-0.1 -0.002 52.8 113.9-123.4 27.0 49.5 3.5 27.9 30 29 A S S S+ 0 0 77 -5,-0.2 -5,-0.2 1,-0.1 -2,-0.1 -0.974 77.4 1.6-155.5 149.8 47.0 6.4 28.0 31 30 A P S S+ 0 0 63 0, 0.0 2,-0.3 0, 0.0 35,-0.1 -0.943 142.3 21.1 -69.9 -16.9 44.3 7.3 28.2 32 31 A H S S- 0 0 16 33,-0.4 32,-0.0 39,-0.1 -2,-0.0 -0.799 71.3-130.9-111.2 153.0 44.0 3.5 28.4 33 32 A R - 0 0 177 -2,-0.3 -4,-0.2 -4,-0.1 2,-0.1 -0.890 32.2-133.1-101.6 111.5 46.4 0.7 29.3 34 33 A P - 0 0 23 0, 0.0 3,-0.0 0, 0.0 -8,-0.0 -0.356 12.2-155.2 -72.8 142.1 46.3 -2.0 26.7 35 34 A R S S+ 0 0 175 -2,-0.1 2,-0.4 1,-0.1 -9,-0.0 0.461 88.6 48.2 -88.3 -10.9 46.0 -5.7 27.6 36 35 A F + 0 0 41 -10,-0.1 -1,-0.1 4,-0.0 19,-0.0 -0.994 69.9 156.4-135.7 139.6 47.6 -6.4 24.3 37 37 A S >> - 0 0 28 -2,-0.4 4,-2.6 17,-0.1 3,-0.8 -0.964 55.1 -97.3-157.0 167.7 50.7 -4.9 22.7 38 38 A P T 34 S+ 0 0 57 0, 0.0 7,-0.1 0, 0.0 -11,-0.1 0.696 119.3 57.4 -61.4 -21.9 53.5 -5.4 20.2 39 39 A A T 34 S+ 0 0 90 2,-0.1 -12,-0.0 1,-0.1 -3,-0.0 0.785 118.0 29.0 -81.2 -26.9 55.8 -6.5 23.1 40 40 A T T <4 S+ 0 0 95 -3,-0.8 3,-0.1 1,-0.2 -1,-0.1 0.735 129.5 34.1-102.5 -33.7 53.6 -9.4 24.3 41 41 A H >< + 0 0 50 -4,-2.6 3,-1.8 1,-0.1 5,-0.4 -0.611 65.7 165.6-127.0 68.0 51.7 -10.5 21.1 42 42 A P G > S+ 0 0 103 0, 0.0 3,-0.6 0, 0.0 -1,-0.1 0.705 74.1 56.0 -58.9 -27.6 54.3 -9.9 18.4 43 43 A S G 3 S+ 0 0 92 1,-0.2 -2,-0.0 -3,-0.1 0, 0.0 0.328 90.6 80.5 -85.2 1.9 52.4 -12.0 15.8 44 44 A E G < S- 0 0 34 -3,-1.8 9,-0.4 -7,-0.1 -1,-0.2 0.444 96.7-118.1 -96.6 0.3 49.3 -9.8 16.2 45 45 A G < + 0 0 11 -3,-0.6 2,-2.0 1,-0.2 5,-0.1 0.784 46.8 165.2 71.3 35.1 49.9 -6.7 14.0 46 46 A L + 0 0 10 -5,-0.4 2,-0.4 -9,-0.1 -1,-0.2 -0.297 23.3 143.9 -81.8 53.4 49.8 -4.1 16.9 47 47 A E > - 0 0 95 -2,-2.0 3,-1.4 -10,-0.1 2,-0.0 -0.769 61.3 -27.8-100.4 140.5 51.4 -1.4 14.8 48 48 A E T 3 S- 0 0 90 -2,-0.4 -22,-1.4 1,-0.2 -21,-0.4 -0.329 109.5 -50.1 58.6-135.0 50.6 2.3 15.0 49 49 A N T 3 S+ 0 0 33 -24,-0.2 -26,-0.3 -36,-0.1 -1,-0.2 -0.335 91.2 143.0-129.0 45.8 47.0 2.8 16.1 50 50 A Y < - 0 0 53 -3,-1.4 2,-0.4 -5,-0.1 -35,-0.2 -0.602 58.3 -97.0 -92.8 157.0 45.2 0.5 13.7 51 51 A c + 0 0 0 -37,-2.0 12,-0.2 -2,-0.2 -39,-0.2 -0.529 54.4 160.2 -71.1 115.8 42.2 -1.8 14.2 52 52 A R B -D 62 0D 1 10,-2.1 10,-2.5 -2,-0.4 23,-0.1 -0.640 40.1-135.5-128.1-174.4 43.3 -5.4 15.0 53 53 A N > + 0 0 4 -9,-0.4 3,-1.3 -45,-0.3 10,-0.1 -0.530 29.1 165.0-149.0 70.9 41.8 -8.5 16.6 54 54 A P T 3 S+ 0 0 10 0, 0.0 -17,-0.1 0, 0.0 -11,-0.1 0.532 79.9 43.2 -65.8 -11.6 44.4 -9.9 19.0 55 55 A D T 3 S- 0 0 74 -11,-0.0 -47,-0.1 -3,-0.0 -11,-0.0 0.198 109.0-111.0-125.8 16.5 41.9 -12.0 20.6 56 56 A N < - 0 0 93 -3,-1.3 -49,-0.1 1,-0.2 -48,-0.1 0.893 46.9-169.3 52.0 44.3 39.7 -13.5 17.8 57 57 A D > - 0 0 13 1,-0.1 3,-1.2 -51,-0.1 -1,-0.2 -0.444 22.9-134.4 -63.6 134.5 36.8 -11.3 19.0 58 58 A P T 3 S+ 0 0 119 0, 0.0 -1,-0.1 0, 0.0 -51,-0.1 0.607 101.0 61.1 -72.7 -17.2 33.7 -12.5 17.2 59 59 A Q T 3 S- 0 0 135 1,-0.3 -2,-0.1 -53,-0.1 -52,-0.0 0.525 106.2-128.1 -88.8 -6.4 32.6 -8.9 16.4 60 60 A G < + 0 0 3 -3,-1.2 -1,-0.3 14,-0.1 -53,-0.2 -0.409 57.6 11.5 93.1-172.5 35.7 -8.2 14.4 61 61 A P + 0 0 4 0, 0.0 14,-3.5 0, 0.0 2,-0.2 -0.047 62.4 156.0 -48.9 127.8 38.4 -5.5 14.4 62 62 A W E -DE 52 74D 8 -10,-2.5 -10,-2.1 12,-0.3 2,-0.3 -0.742 19.2-159.3-137.9-179.9 38.5 -3.0 17.3 63 63 A b E - E 0 73D 0 10,-1.5 10,-0.9 -2,-0.2 2,-0.2 -0.961 34.7 -86.7-163.4 159.9 41.2 -0.8 18.9 64 64 A Y E - E 0 72D 7 -40,-0.4 -40,-3.3 -2,-0.3 8,-0.3 -0.497 54.4-128.5 -72.3 140.3 41.9 1.0 22.1 65 65 A T B -C 23 0C 0 6,-3.1 -33,-0.4 5,-0.3 -42,-0.2 -0.420 11.5-141.8 -93.4 168.3 40.2 4.4 22.0 66 66 A T S S+ 0 0 51 -44,-0.8 -43,-0.1 -2,-0.1 5,-0.1 0.299 77.4 95.8-105.3 -7.1 41.5 7.9 22.6 67 67 A D S > S- 0 0 60 3,-0.4 3,-3.0 1,-0.1 -2,-0.1 -0.885 75.7-140.0 -91.2 112.8 38.3 9.1 24.3 68 68 A P T 3 S+ 0 0 86 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.651 101.2 50.7 -51.1 -22.2 39.1 8.7 28.0 69 69 A E T 3 S+ 0 0 176 1,-0.2 2,-0.5 2,-0.0 -3,-0.0 0.442 102.1 66.4 -98.6 1.7 35.6 7.5 28.7 70 70 A K < - 0 0 83 -3,-3.0 -3,-0.4 1,-0.2 -5,-0.3 -0.933 59.6-175.9-125.8 107.0 35.5 4.9 25.8 71 71 A R - 0 0 82 -2,-0.5 -6,-3.1 1,-0.2 2,-0.3 0.988 65.0 -12.2 -63.1 -68.7 37.9 2.0 26.4 72 72 A Y E +E 64 0D 92 -8,-0.3 2,-0.3 -49,-0.1 -8,-0.2 -0.772 62.6 174.7-130.9 171.5 37.6 -0.0 23.2 73 73 A D E -E 63 0D 8 -10,-0.9 -10,-1.5 -2,-0.3 -3,-0.0 -0.861 32.1 -95.7-177.7 150.3 35.3 -0.0 20.2 74 74 A Y E -E 62 0D 32 -2,-0.3 -56,-2.5 -12,-0.2 2,-0.3 -0.117 32.3-123.9 -69.8 161.0 34.9 -1.8 16.9 75 75 A c - 0 0 15 -14,-3.5 2,-1.6 -58,-0.3 -58,-0.2 -0.915 14.4-125.7-110.4 143.5 36.0 -0.5 13.4 76 76 A D + 0 0 114 -2,-0.3 2,-0.5 -60,-0.3 -14,-0.1 -0.658 43.0 177.1 -85.6 82.5 33.9 -0.1 10.3 77 77 A I - 0 0 9 -2,-1.6 -74,-0.2 -16,-0.1 3,-0.1 -0.759 35.9-104.3 -90.6 125.2 36.2 -2.2 8.0 78 78 A L - 0 0 123 -2,-0.5 -75,-3.2 -77,-0.2 2,-0.2 -0.091 40.0-111.3 -53.6 136.7 35.0 -2.8 4.4 79 79 A E B a 3 0A 116 -77,-0.2 -75,-0.2 1,-0.1 -1,-0.1 -0.457 360.0 360.0 -69.9 136.8 33.7 -6.2 3.9 80 80 A a 0 0 93 -77,-3.1 -76,-0.2 -2,-0.2 -1,-0.1 0.919 360.0 360.0-100.6 360.0 35.7 -8.4 1.8