==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=17-JUN-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN/RNA 14-MAY-07 2PXQ . COMPND 2 MOLECULE: SIGNAL RECOGNITION PARTICLE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR A.Y.KEEL,R.P.RAMBO,R.T.BATEY,J.S.KIEFT . 69 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4750.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 78.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 20.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 52.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A F 0 0 86 0, 0.0 2,-0.2 0, 0.0 67,-0.0 0.000 360.0 360.0 360.0 126.4 25.1 61.8 36.0 2 2 A D > - 0 0 37 28,-0.1 4,-3.2 29,-0.0 5,-0.4 -0.838 360.0 -69.7-144.2-179.3 26.5 58.2 36.4 3 3 A L T 4 S+ 0 0 0 25,-1.4 26,-0.1 24,-0.3 25,-0.1 0.551 130.2 53.1 -54.4 -6.0 25.5 54.5 36.5 4 4 A N T >> S+ 0 0 32 24,-0.5 4,-1.8 2,-0.2 3,-1.2 0.890 109.7 41.0 -93.3 -59.0 23.9 55.3 39.8 5 5 A D H >> S+ 0 0 66 1,-0.3 4,-1.2 2,-0.2 3,-1.1 0.959 116.3 53.5 -50.8 -50.6 21.6 58.2 38.7 6 6 A F H 3< S+ 0 0 13 -4,-3.2 -1,-0.3 1,-0.3 -3,-0.2 0.766 104.2 55.7 -56.1 -26.3 21.0 56.2 35.6 7 7 A L H <4 S+ 0 0 49 -3,-1.2 -1,-0.3 -5,-0.4 -2,-0.2 0.838 93.6 67.1 -75.5 -31.6 20.0 53.3 38.0 8 8 A E H << 0 0 150 -4,-1.8 -2,-0.2 -3,-1.1 -1,-0.2 0.907 360.0 360.0 -51.8 -41.4 17.4 55.6 39.6 9 9 A Q < 0 0 128 -4,-1.2 0, 0.0 -5,-0.2 0, 0.0 -0.498 360.0 360.0 -82.7 360.0 15.7 55.4 36.2 10 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 11 23 A K 0 0 140 0, 0.0 4,-0.1 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 150.6 9.7 43.7 31.9 12 24 A V >> + 0 0 83 2,-0.1 3,-1.5 1,-0.1 4,-0.7 0.612 360.0 80.6 -98.5 -19.2 13.3 44.0 30.6 13 25 A L H >> S+ 0 0 59 1,-0.3 3,-1.2 2,-0.2 4,-0.9 0.833 78.7 73.4 -56.2 -30.1 14.1 46.8 33.0 14 26 A V H >> S+ 0 0 62 1,-0.3 4,-1.8 2,-0.2 3,-0.5 0.875 99.6 43.9 -50.0 -41.3 14.6 44.0 35.6 15 27 A R H <> S+ 0 0 38 -3,-1.5 4,-1.6 2,-0.2 -1,-0.3 0.616 96.3 72.5 -81.0 -15.4 17.8 43.1 33.8 16 28 A X H < S+ 0 0 7 -4,-1.6 3,-3.5 2,-0.2 4,-0.4 1.000 116.4 39.2 -63.6 -73.6 23.8 44.0 35.3 20 32 A I H >< S+ 0 0 1 -4,-0.9 3,-2.4 1,-0.3 -2,-0.2 0.869 109.3 64.3 -46.2 -41.3 24.5 47.3 37.2 21 33 A N T 3< S+ 0 0 90 -4,-3.0 -1,-0.3 1,-0.3 -2,-0.2 0.677 97.1 58.5 -59.7 -14.1 23.9 45.4 40.4 22 34 A S T < S+ 0 0 35 -3,-3.5 -1,-0.3 -5,-0.4 -2,-0.2 0.520 93.7 91.2 -91.7 -5.3 26.9 43.3 39.5 23 35 A X S < S- 0 0 16 -3,-2.4 2,-0.3 -4,-0.4 -3,-0.0 -0.097 75.2-108.8 -85.0-178.4 29.3 46.3 39.3 24 36 A T > - 0 0 57 1,-0.1 4,-2.6 -2,-0.0 5,-0.3 -0.798 31.0-111.1-108.5 154.1 31.5 48.1 41.8 25 37 A X H > S+ 0 0 132 -2,-0.3 4,-1.6 1,-0.3 -1,-0.1 0.856 121.3 52.7 -52.8 -33.9 30.9 51.5 43.3 26 38 A K H > S+ 0 0 164 2,-0.2 4,-0.7 1,-0.2 -1,-0.3 0.906 107.8 48.7 -68.8 -42.1 33.9 52.7 41.2 27 39 A E H >4 S+ 0 0 0 -3,-0.3 3,-1.8 1,-0.2 -24,-0.3 0.973 113.7 46.4 -61.2 -51.9 32.5 51.2 37.9 28 40 A R H 3< S+ 0 0 52 -4,-2.6 -25,-1.4 1,-0.3 -24,-0.5 0.836 114.1 51.1 -57.6 -32.6 29.1 52.9 38.6 29 41 A A H 3< S+ 0 0 48 -4,-1.6 -1,-0.3 -5,-0.3 -2,-0.2 0.509 130.4 12.2 -83.4 -7.2 31.1 56.0 39.5 30 42 A K X< + 0 0 108 -3,-1.8 3,-0.6 -4,-0.7 -1,-0.2 -0.310 61.0 177.9-171.8 77.0 33.1 56.0 36.3 31 43 A P G > + 0 0 25 0, 0.0 3,-3.8 0, 0.0 2,-0.4 0.738 65.6 92.8 -54.4 -29.8 32.0 53.6 33.4 32 44 A E G 3 S+ 0 0 145 1,-0.3 -5,-0.1 -5,-0.1 3,-0.0 0.364 86.4 52.2 -54.3 11.7 34.8 54.8 31.1 33 45 A I G < S+ 0 0 42 -3,-0.6 2,-2.7 -2,-0.4 -1,-0.3 0.361 70.5 121.0-125.0 -3.0 36.9 52.0 32.5 34 46 A I < + 0 0 10 -3,-3.8 -2,-0.0 -7,-0.1 23,-0.0 -0.336 44.9 165.6 -66.9 72.0 34.4 49.1 31.9 35 47 A K > - 0 0 127 -2,-2.7 4,-4.5 4,-0.1 5,-0.2 0.000 51.3 -78.1 -81.1-174.2 36.7 47.0 29.7 36 48 A G H > S+ 0 0 41 2,-0.2 4,-3.2 1,-0.2 5,-0.4 0.953 126.8 46.6 -46.8 -68.0 36.7 43.5 28.4 37 49 A S H > S+ 0 0 93 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.881 119.2 42.5 -44.7 -48.5 37.9 41.7 31.6 38 50 A R H > S+ 0 0 85 2,-0.2 4,-2.4 -5,-0.2 3,-0.3 0.982 114.9 50.2 -65.9 -52.6 35.5 43.8 33.6 39 51 A K H X S+ 0 0 55 -4,-4.5 4,-2.5 1,-0.3 3,-0.4 0.950 107.4 53.1 -46.3 -65.5 32.7 43.3 31.1 40 52 A R H X S+ 0 0 158 -4,-3.2 4,-1.7 1,-0.3 5,-0.3 0.862 110.6 50.0 -38.1 -45.7 33.2 39.5 31.0 41 53 A R H X S+ 0 0 97 -4,-1.8 4,-1.8 -5,-0.4 -1,-0.3 0.947 110.9 47.7 -59.8 -50.9 32.9 39.6 34.8 42 54 A I H X S+ 0 0 0 -4,-2.4 4,-2.5 -3,-0.4 6,-0.3 0.889 108.2 54.6 -57.8 -46.3 29.7 41.7 34.7 43 55 A A H <>S+ 0 0 4 -4,-2.5 5,-2.8 1,-0.2 3,-0.5 0.982 115.5 37.0 -53.1 -65.0 28.0 39.5 32.1 44 56 A A H ><5S+ 0 0 81 -4,-1.7 3,-1.2 1,-0.2 -1,-0.2 0.784 110.9 65.9 -59.2 -26.2 28.4 36.2 34.1 45 57 A G H 3<5S+ 0 0 49 -4,-1.8 -1,-0.2 -5,-0.3 -2,-0.2 0.967 115.1 26.4 -59.9 -51.0 27.8 38.3 37.2 46 58 A S T 3<5S- 0 0 14 -4,-2.5 -1,-0.3 -3,-0.5 -2,-0.2 -0.330 114.3-109.0-108.7 49.4 24.2 38.9 36.1 47 59 A G T < 5S+ 0 0 56 -3,-1.2 -3,-0.2 -2,-0.1 2,-0.2 0.632 79.5 125.9 32.1 31.9 23.8 35.8 34.0 48 60 A X < - 0 0 60 -5,-2.8 2,-0.3 -6,-0.3 -1,-0.1 -0.483 65.4-103.0-106.7 176.6 23.9 37.9 30.8 49 61 A Q >> - 0 0 121 -2,-0.2 3,-1.7 1,-0.1 4,-1.5 -0.684 34.4-114.6 -94.6 155.3 25.9 37.8 27.6 50 62 A V H 3> S+ 0 0 51 1,-0.3 4,-3.0 -2,-0.3 3,-0.4 0.952 117.6 59.8 -57.8 -45.1 28.6 40.3 27.2 51 63 A Q H 3> S+ 0 0 153 1,-0.3 4,-1.7 2,-0.2 -1,-0.3 0.705 101.1 57.9 -54.5 -18.7 26.8 41.9 24.3 52 64 A D H <> S+ 0 0 63 -3,-1.7 4,-2.6 2,-0.2 -1,-0.3 0.950 109.3 42.0 -72.8 -53.6 23.9 42.5 26.8 53 65 A V H X S+ 0 0 0 -4,-1.5 4,-2.4 -3,-0.4 -2,-0.2 0.949 112.4 55.6 -55.6 -51.1 26.2 44.5 29.1 54 66 A N H X S+ 0 0 58 -4,-3.0 4,-2.7 1,-0.2 -1,-0.2 0.906 108.9 47.5 -48.7 -47.7 27.7 46.2 26.1 55 67 A R H X S+ 0 0 44 -4,-1.7 4,-3.3 1,-0.2 -1,-0.2 0.950 110.4 50.4 -60.0 -51.6 24.2 47.3 25.1 56 68 A L H X S+ 0 0 3 -4,-2.6 4,-2.0 1,-0.2 -1,-0.2 0.794 110.5 52.0 -58.1 -29.2 23.3 48.5 28.6 57 69 A L H X S+ 0 0 26 -4,-2.4 4,-2.9 -5,-0.2 -1,-0.2 0.949 110.7 46.8 -71.0 -47.5 26.6 50.5 28.4 58 70 A K H X S+ 0 0 94 -4,-2.7 4,-3.6 -5,-0.2 -2,-0.2 0.898 110.5 53.9 -59.6 -42.5 25.6 52.0 25.1 59 71 A Q H X S+ 0 0 96 -4,-3.3 4,-1.7 2,-0.2 -2,-0.2 0.979 113.6 39.3 -57.4 -60.3 22.1 52.8 26.5 60 72 A F H X S+ 0 0 18 -4,-2.0 4,-4.0 1,-0.2 5,-0.3 0.908 113.3 59.4 -54.5 -41.7 23.4 54.7 29.5 61 73 A D H X S+ 0 0 57 -4,-2.9 4,-2.5 1,-0.2 -2,-0.2 0.975 102.0 52.4 -49.0 -59.7 26.0 56.1 27.2 62 74 A D H X S+ 0 0 75 -4,-3.6 4,-1.8 1,-0.2 -1,-0.2 0.836 115.7 40.1 -45.5 -42.7 23.2 57.5 25.0 63 75 A X H X S+ 0 0 54 -4,-1.7 4,-2.9 2,-0.2 -1,-0.2 0.929 107.8 58.6 -76.0 -45.4 21.7 59.2 28.0 64 76 A Q H X S+ 0 0 28 -4,-4.0 4,-3.1 1,-0.2 -2,-0.2 0.877 107.9 53.4 -48.8 -36.5 25.0 60.3 29.6 65 77 A R H < S+ 0 0 151 -4,-2.5 -2,-0.2 -5,-0.3 -1,-0.2 0.992 106.2 47.2 -61.0 -64.1 25.3 62.1 26.2 66 78 A X H >< S+ 0 0 107 -4,-1.8 3,-0.8 1,-0.2 -2,-0.2 0.821 114.6 51.3 -47.4 -33.9 21.9 63.9 26.4 67 79 A X H >< S+ 0 0 77 -4,-2.9 3,-1.4 1,-0.3 2,-0.7 0.968 104.7 52.1 -69.0 -54.3 23.0 64.8 29.9 68 80 A K T 3< S+ 0 0 93 -4,-3.1 -1,-0.3 1,-0.3 -2,-0.2 0.068 124.3 34.0 -71.5 29.9 26.4 66.2 28.8 69 81 A K T < 0 0 180 -3,-0.8 -1,-0.3 -2,-0.7 -2,-0.2 0.012 360.0 360.0-176.8 46.3 24.3 68.2 26.4 70 82 A X < 0 0 208 -3,-1.4 -4,-0.1 -5,-0.0 -3,-0.0 -0.412 360.0 360.0-130.8 360.0 21.0 69.1 28.0