==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN/RNA 14-MAY-07 2PXT . COMPND 2 MOLECULE: SIGNAL RECOGNITION PARTICLE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR A.Y.KEEL,R.P.RAMBO,R.T.BATEY,J.S.KIEFT . 69 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4683.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 48 69.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 13.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 52.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A F 0 0 99 0, 0.0 2,-0.1 0, 0.0 66,-0.1 0.000 360.0 360.0 360.0 106.2 224.7 46.5 68.9 2 2 A D > - 0 0 36 28,-0.1 4,-2.0 29,-0.0 3,-0.4 -0.436 360.0 -80.8-113.7-172.5 226.0 43.0 69.3 3 3 A L T 4 S+ 0 0 0 25,-2.5 4,-0.4 1,-0.2 26,-0.2 0.539 123.5 63.0 -69.0 -6.6 224.7 39.4 69.0 4 4 A N T > S+ 0 0 31 24,-0.5 4,-1.1 2,-0.2 -1,-0.2 0.881 105.0 43.1 -82.6 -43.7 223.1 39.7 72.5 5 5 A D H >> S+ 0 0 70 -3,-0.4 3,-1.0 1,-0.2 4,-0.9 0.943 111.5 55.1 -65.2 -47.1 220.8 42.5 71.4 6 6 A F H 3< S+ 0 0 13 -4,-2.0 3,-0.2 1,-0.3 -1,-0.2 0.787 104.4 57.0 -55.2 -27.9 220.1 40.6 68.2 7 7 A L H 34 S+ 0 0 38 -4,-0.4 -1,-0.3 1,-0.2 -2,-0.2 0.825 95.9 60.4 -73.2 -33.9 219.1 37.7 70.5 8 8 A E H << 0 0 150 -4,-1.1 -1,-0.2 -3,-1.0 -2,-0.2 0.753 360.0 360.0 -64.4 -22.2 216.5 39.8 72.2 9 9 A Q < 0 0 142 -4,-0.9 -3,-0.1 -3,-0.2 0, 0.0 0.152 360.0 360.0-101.4 360.0 214.9 40.1 68.8 10 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 11 23 A K > 0 0 133 0, 0.0 4,-0.6 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 -72.0 209.7 27.7 64.7 12 24 A V H > + 0 0 76 1,-0.2 4,-0.9 2,-0.2 3,-0.2 0.722 360.0 66.3 -80.6 -22.0 212.9 28.8 62.9 13 25 A L H > S+ 0 0 61 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.798 93.5 58.5 -68.8 -28.8 213.4 31.4 65.6 14 26 A V H > S+ 0 0 62 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.853 106.1 48.0 -69.9 -32.9 214.0 28.6 68.2 15 27 A R H X S+ 0 0 40 -4,-0.6 4,-1.6 -3,-0.2 -1,-0.2 0.692 106.8 57.4 -79.9 -19.5 216.9 27.3 66.2 16 28 A X H X S+ 0 0 52 -4,-0.9 4,-1.9 2,-0.2 -2,-0.2 0.877 108.5 45.6 -76.0 -39.2 218.3 30.8 65.8 17 29 A E H X S+ 0 0 99 -4,-1.7 4,-4.0 2,-0.2 5,-0.2 0.933 108.1 59.7 -65.1 -45.0 218.4 31.1 69.6 18 30 A A H < S+ 0 0 37 -4,-1.8 4,-0.2 1,-0.2 -2,-0.2 0.898 106.4 46.5 -48.2 -49.0 219.9 27.6 69.7 19 31 A I H >< S+ 0 0 6 -4,-1.6 3,-1.7 1,-0.2 -1,-0.2 0.961 116.4 42.1 -61.5 -53.8 222.9 28.8 67.6 20 32 A I H >< S+ 0 0 2 -4,-1.9 3,-2.3 1,-0.3 -2,-0.2 0.910 107.3 63.5 -61.6 -39.5 223.6 32.0 69.6 21 33 A N T 3< S+ 0 0 90 -4,-4.0 -1,-0.3 1,-0.3 -2,-0.2 0.555 99.3 56.5 -61.7 -5.9 223.0 30.0 72.8 22 34 A S T < S+ 0 0 31 -3,-1.7 -1,-0.3 -5,-0.2 -2,-0.2 0.364 90.0 89.6-108.7 5.0 226.0 27.9 71.9 23 35 A X S < S- 0 0 9 -3,-2.3 2,-0.1 -4,-0.1 3,-0.0 -0.495 77.5-112.4 -95.3 168.1 228.5 30.8 71.6 24 36 A T > - 0 0 62 -2,-0.2 4,-1.8 1,-0.1 5,-0.1 -0.419 33.6-102.6 -89.8 174.4 230.7 32.2 74.3 25 37 A X H > S+ 0 0 110 1,-0.2 4,-2.0 2,-0.2 3,-0.3 0.969 121.1 53.2 -63.4 -50.8 230.3 35.7 75.7 26 38 A K H > S+ 0 0 163 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.875 109.1 51.3 -51.4 -38.6 233.2 37.1 73.8 27 39 A E H 4 S+ 0 0 0 1,-0.2 -1,-0.2 2,-0.2 -2,-0.2 0.898 108.3 49.9 -66.9 -40.2 231.8 35.7 70.6 28 40 A R H < S+ 0 0 44 -4,-1.8 -25,-2.5 -3,-0.3 -24,-0.5 0.801 117.0 42.7 -67.6 -28.1 228.3 37.3 71.2 29 41 A A H < S+ 0 0 52 -4,-2.0 -2,-0.2 1,-0.2 -1,-0.2 0.845 125.9 27.8 -86.2 -39.4 230.0 40.7 71.8 30 42 A K S >< S+ 0 0 109 -4,-2.6 3,-2.2 -5,-0.2 4,-0.2 -0.621 70.4 178.5-126.6 70.9 232.6 40.8 69.1 31 43 A P G > + 0 0 22 0, 0.0 3,-2.0 0, 0.0 -1,-0.1 0.696 69.3 73.4 -43.0 -34.8 231.1 38.6 66.2 32 44 A E G 3 S+ 0 0 114 1,-0.3 -5,-0.1 3,-0.0 -2,-0.0 0.660 83.5 68.0 -63.0 -15.7 233.9 39.1 63.8 33 45 A I G < S+ 0 0 44 -3,-2.2 2,-1.4 -7,-0.2 -1,-0.3 0.659 74.8 103.2 -77.4 -11.9 236.2 36.9 65.8 34 46 A I < + 0 0 10 -3,-2.0 -1,-0.1 -4,-0.2 2,-0.1 -0.535 49.0 152.3 -75.8 92.4 234.0 33.9 64.8 35 47 A K > - 0 0 138 -2,-1.4 4,-2.3 4,-0.0 5,-0.2 -0.072 59.2 -58.5-100.7-154.6 236.0 32.1 62.1 36 48 A G H > S+ 0 0 46 2,-0.2 4,-2.3 1,-0.2 5,-0.1 0.909 127.1 47.5 -57.2 -54.8 236.1 28.5 60.9 37 49 A S H > S+ 0 0 85 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.923 115.5 44.8 -56.9 -49.5 237.1 26.7 64.0 38 50 A R H > S+ 0 0 94 1,-0.2 4,-2.9 2,-0.2 -1,-0.2 0.901 108.7 57.0 -64.9 -40.0 234.6 28.4 66.2 39 51 A K H X S+ 0 0 52 -4,-2.3 4,-3.0 1,-0.2 5,-0.2 0.930 106.4 51.5 -56.5 -43.0 231.8 28.0 63.6 40 52 A R H X S+ 0 0 161 -4,-2.3 4,-2.2 1,-0.2 5,-0.3 0.945 110.8 46.6 -58.5 -47.4 232.5 24.2 63.8 41 53 A R H X S+ 0 0 101 -4,-1.9 4,-2.0 1,-0.2 -2,-0.2 0.923 115.4 47.1 -59.4 -45.3 232.2 24.2 67.6 42 54 A I H X S+ 0 0 0 -4,-2.9 4,-1.6 2,-0.2 6,-0.3 0.907 111.0 50.0 -62.7 -49.3 229.0 26.3 67.4 43 55 A A H ><>S+ 0 0 5 -4,-3.0 5,-3.2 -5,-0.2 3,-0.7 0.971 116.3 39.9 -57.4 -57.3 227.3 24.2 64.7 44 56 A A H ><5S+ 0 0 80 -4,-2.2 3,-1.4 1,-0.2 -1,-0.2 0.874 111.7 60.2 -61.6 -35.2 227.9 20.9 66.4 45 57 A G H 3<5S+ 0 0 53 -4,-2.0 -1,-0.2 -5,-0.3 -2,-0.2 0.804 113.7 34.8 -62.1 -31.8 227.1 22.4 69.7 46 58 A S T <<5S- 0 0 22 -4,-1.6 -1,-0.3 -3,-0.7 -2,-0.2 0.124 115.4-113.2-107.3 17.2 223.6 23.4 68.6 47 59 A G T < 5S+ 0 0 57 -3,-1.4 -3,-0.2 1,-0.2 -4,-0.1 0.779 79.4 122.3 56.3 29.0 223.2 20.3 66.4 48 60 A X < - 0 0 52 -5,-3.2 2,-0.3 -6,-0.3 -1,-0.2 -0.222 65.0-102.6-104.1-166.3 223.3 22.5 63.4 49 61 A Q >> - 0 0 107 1,-0.1 4,-1.7 -2,-0.1 3,-1.3 -0.920 30.3-114.9-121.5 147.4 225.3 22.8 60.2 50 62 A V H 3> S+ 0 0 56 -2,-0.3 4,-3.1 1,-0.3 3,-0.3 0.916 117.8 59.9 -47.8 -47.3 228.0 25.4 59.6 51 63 A Q H 3> S+ 0 0 135 1,-0.3 4,-2.8 2,-0.2 -1,-0.3 0.841 101.7 53.1 -49.2 -39.5 225.9 26.8 56.8 52 64 A D H <> S+ 0 0 69 -3,-1.3 4,-1.6 2,-0.2 -1,-0.3 0.938 110.9 46.7 -62.2 -46.4 223.1 27.4 59.4 53 65 A V H X S+ 0 0 0 -4,-1.7 4,-3.1 -3,-0.3 3,-0.4 0.936 112.7 48.6 -59.9 -48.9 225.6 29.3 61.5 54 66 A N H X S+ 0 0 55 -4,-3.1 4,-2.4 1,-0.2 -1,-0.2 0.902 109.0 54.6 -58.1 -40.6 226.8 31.3 58.5 55 67 A R H X S+ 0 0 44 -4,-2.8 4,-1.5 -5,-0.3 -1,-0.2 0.836 112.0 44.2 -61.3 -34.4 223.2 32.0 57.6 56 68 A L H X S+ 0 0 3 -4,-1.6 4,-3.3 -3,-0.4 5,-0.3 0.932 113.4 47.4 -75.8 -50.3 222.7 33.4 61.1 57 69 A L H X S+ 0 0 28 -4,-3.1 4,-1.3 1,-0.2 -2,-0.2 0.839 112.7 53.3 -58.8 -34.4 225.9 35.5 61.2 58 70 A K H X S+ 0 0 115 -4,-2.4 4,-2.5 -5,-0.3 -1,-0.2 0.893 111.1 44.6 -66.9 -44.2 224.8 36.7 57.7 59 71 A Q H X S+ 0 0 93 -4,-1.5 4,-2.9 2,-0.2 -2,-0.2 0.933 111.4 51.3 -67.4 -46.8 221.4 37.7 59.0 60 72 A F H X S+ 0 0 17 -4,-3.3 4,-3.6 2,-0.2 -1,-0.2 0.844 110.0 55.3 -57.5 -31.9 222.8 39.4 62.1 61 73 A D H X S+ 0 0 59 -4,-1.3 4,-3.7 -5,-0.3 5,-0.4 0.993 107.6 42.8 -64.6 -63.4 225.1 41.1 59.6 62 74 A D H X S+ 0 0 68 -4,-2.5 4,-1.6 1,-0.3 -2,-0.2 0.893 118.9 50.7 -49.2 -39.0 222.3 42.6 57.4 63 75 A X H < S+ 0 0 54 -4,-2.9 4,-0.3 2,-0.2 -2,-0.3 0.929 110.7 44.9 -63.6 -49.8 220.7 43.4 60.7 64 76 A Q H >X S+ 0 0 26 -4,-3.6 3,-1.7 1,-0.2 4,-1.5 0.922 113.3 51.5 -61.5 -44.4 223.8 45.0 62.2 65 77 A R H 3< S+ 0 0 149 -4,-3.7 -1,-0.2 1,-0.3 -2,-0.2 0.820 102.5 59.6 -61.5 -32.3 224.3 46.9 58.9 66 78 A X T 3< S+ 0 0 119 -4,-1.6 -1,-0.3 -5,-0.4 3,-0.3 0.593 107.0 49.3 -71.7 -10.4 220.7 48.1 59.2 67 79 A X T <4 S+ 0 0 68 -3,-1.7 3,-0.4 -4,-0.3 2,-0.3 0.754 96.8 65.1 -97.3 -33.2 221.7 49.6 62.4 68 80 A K S < S+ 0 0 88 -4,-1.5 -1,-0.2 1,-0.2 -2,-0.1 -0.049 96.6 66.5 -80.7 34.3 224.8 51.5 61.1 69 81 A K 0 0 162 -2,-0.3 -1,-0.2 -3,-0.3 -4,-0.0 -0.287 360.0 360.0-151.2 53.4 222.3 53.5 59.1 70 82 A X 0 0 215 -3,-0.4 -2,-0.1 0, 0.0 -3,-0.1 -0.219 360.0 360.0 164.4 360.0 220.3 55.5 61.6