==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 28-JUL-03 1Q38 . COMPND 2 MOLECULE: FIBRONECTIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.BRIKNAROVA,M.E.AKERMAN,D.W.HOYT,E.RUOSLAHTI,K.R.ELY . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7520.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 40 44.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 24.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 211 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -16.1 -14.2 -6.6 12.3 2 2 A R - 0 0 196 1,-0.1 2,-0.2 36,-0.0 0, 0.0 0.920 360.0 -73.8 -88.2 -78.2 -10.6 -5.4 12.4 3 3 A G - 0 0 57 35,-0.0 2,-0.3 2,-0.0 -1,-0.1 -0.631 31.0-134.5 170.9 128.0 -8.3 -8.0 11.0 4 4 A S - 0 0 111 -2,-0.2 2,-0.3 33,-0.1 33,-0.0 -0.652 30.9-111.3 -92.8 148.7 -6.8 -11.3 11.9 5 5 A N - 0 0 143 -2,-0.3 -1,-0.1 28,-0.0 28,-0.0 -0.580 24.6-163.3 -80.4 138.1 -3.1 -12.2 11.4 6 6 A A - 0 0 32 -2,-0.3 2,-0.7 7,-0.2 -1,-0.0 -0.838 6.4-155.6-125.5 93.6 -2.3 -14.8 8.8 7 7 A P S S- 0 0 102 0, 0.0 6,-0.1 0, 0.0 7,-0.1 -0.572 77.2 -23.0 -73.1 109.8 1.3 -16.2 9.2 8 8 A Q S S+ 0 0 133 -2,-0.7 5,-0.2 5,-0.5 4,-0.1 0.967 93.0 169.0 53.7 63.2 2.5 -17.5 5.8 9 9 A P - 0 0 52 0, 0.0 26,-0.1 0, 0.0 4,-0.0 0.081 57.3 -67.0 -85.9-158.9 -1.0 -18.1 4.3 10 10 A S S S+ 0 0 130 2,-0.1 3,-0.1 3,-0.0 25,-0.1 0.778 124.8 49.3 -64.2 -25.2 -2.0 -18.8 0.7 11 11 A H S S- 0 0 109 1,-0.2 2,-0.1 23,-0.1 24,-0.0 -0.008 115.1 -44.4 -94.5-157.9 -0.7 -15.3 -0.1 12 12 A I - 0 0 22 1,-0.1 -1,-0.2 -4,-0.1 3,-0.2 -0.394 51.8-116.7 -72.8 150.9 2.5 -13.6 0.8 13 13 A S S S- 0 0 7 1,-0.2 -5,-0.5 -5,-0.2 2,-0.3 0.909 90.4 -26.4 -52.1 -44.9 3.9 -13.9 4.3 14 14 A K E -A 58 0A 71 44,-1.4 44,-3.4 20,-0.1 2,-0.3 -0.912 59.0-133.1-171.6 143.8 3.5 -10.1 4.7 15 15 A Y E -AB 57 33A 37 18,-0.7 18,-1.9 -2,-0.3 2,-0.5 -0.787 17.0-143.4-103.6 146.8 3.4 -7.0 2.6 16 16 A I E -AB 56 32A 18 40,-1.8 40,-2.6 -2,-0.3 2,-0.6 -0.941 10.1-165.9-114.7 125.0 5.3 -3.8 3.4 17 17 A L E -AB 55 31A 19 14,-1.5 14,-1.1 -2,-0.5 2,-0.5 -0.927 8.4-178.6-112.9 114.5 3.9 -0.4 2.7 18 18 A R E +AB 54 30A 102 36,-2.4 36,-2.1 -2,-0.6 2,-0.3 -0.942 7.1 168.1-115.1 129.6 6.2 2.6 2.8 19 19 A W E +AB 53 29A 44 10,-1.1 10,-0.7 -2,-0.5 34,-0.2 -0.992 8.1 170.9-142.2 148.9 5.1 6.1 2.2 20 20 A R E -A 52 0A 55 32,-0.9 32,-1.3 -2,-0.3 2,-0.4 -0.981 46.1 -88.9-155.7 142.9 6.5 9.6 2.6 21 21 A P E >> -A 51 0A 24 0, 0.0 5,-0.8 0, 0.0 4,-0.7 -0.364 34.3-173.9 -57.6 109.9 5.5 13.2 1.6 22 22 A K T 45S+ 0 0 91 28,-1.4 29,-0.2 -2,-0.4 27,-0.0 0.732 88.6 41.9 -77.2 -23.7 6.9 13.7 -1.8 23 23 A N T 45S+ 0 0 116 27,-1.1 -1,-0.2 1,-0.1 28,-0.1 0.653 123.7 37.1 -95.3 -20.4 5.8 17.4 -1.8 24 24 A S T 45S- 0 0 84 26,-0.3 -2,-0.2 -4,-0.0 -1,-0.1 0.347 98.6-140.3-110.7 2.0 6.8 17.9 1.9 25 25 A V T <5 + 0 0 111 -4,-0.7 -3,-0.2 -5,-0.1 2,-0.1 0.884 48.1 137.4 33.8 85.2 10.0 15.8 1.7 26 26 A G < - 0 0 38 -5,-0.8 2,-0.2 1,-0.1 -1,-0.1 -0.298 51.9 -49.3-128.4-147.2 9.8 14.1 5.1 27 27 A R - 0 0 232 -2,-0.1 -1,-0.1 1,-0.1 2,-0.1 -0.606 50.5-119.1 -96.3 157.9 10.4 10.7 6.6 28 28 A W - 0 0 93 -2,-0.2 2,-0.3 -8,-0.2 -8,-0.2 -0.331 21.2-152.5 -88.0 173.9 8.9 7.3 5.5 29 29 A K E -B 19 0A 135 -10,-0.7 -10,-1.1 -2,-0.1 2,-0.4 -0.973 5.3-137.9-145.6 155.1 6.6 4.9 7.3 30 30 A E E +B 18 0A 149 -2,-0.3 2,-0.4 -12,-0.2 -12,-0.2 -0.955 16.0 177.6-124.0 140.3 6.0 1.2 7.2 31 31 A A E -B 17 0A 22 -14,-1.1 -14,-1.5 -2,-0.4 2,-0.5 -0.940 16.5-151.5-140.7 112.1 2.7 -0.8 7.4 32 32 A T E +B 16 0A 81 -2,-0.4 -16,-0.2 -16,-0.2 25,-0.0 -0.746 18.8 170.6 -91.1 127.9 2.7 -4.6 7.1 33 33 A I E -B 15 0A 23 -18,-1.9 2,-1.3 -2,-0.5 -18,-0.7 -0.921 31.5-134.4-137.6 107.5 -0.3 -6.3 5.7 34 34 A P - 0 0 20 0, 0.0 3,-0.1 0, 0.0 -20,-0.1 -0.433 66.7 -58.5 -64.8 91.9 -0.2 -10.1 4.9 35 35 A G S S- 0 0 11 -2,-1.3 2,-0.7 1,-0.2 3,-0.2 -0.342 98.8 -34.1 70.8-152.3 -1.7 -10.2 1.5 36 36 A H S S+ 0 0 148 1,-0.2 -1,-0.2 -2,-0.0 3,-0.1 -0.613 70.8 150.0-107.4 71.2 -5.3 -9.0 0.9 37 37 A L S S- 0 0 72 -2,-0.7 2,-0.3 1,-0.2 -1,-0.2 0.826 74.1 -31.7 -69.3 -31.7 -7.0 -9.8 4.1 38 38 A N S S- 0 0 63 -3,-0.2 2,-0.9 -35,-0.1 -1,-0.2 -0.963 85.9 -55.1-170.6 179.9 -9.3 -6.9 3.7 39 39 A S + 0 0 105 -2,-0.3 2,-0.5 -3,-0.1 -3,-0.0 -0.629 56.5 171.4 -77.0 106.8 -9.7 -3.3 2.3 40 40 A Y + 0 0 150 -2,-0.9 2,-0.4 2,-0.0 -2,-0.0 -0.951 2.5 168.3-123.3 113.3 -6.9 -1.3 3.9 41 41 A T - 0 0 112 -2,-0.5 2,-0.5 0, 0.0 -2,-0.0 -0.986 28.3-136.1-128.6 127.9 -6.2 2.3 2.7 42 42 A I + 0 0 30 -2,-0.4 2,-0.1 1,-0.0 3,-0.1 -0.692 37.3 158.7 -83.6 123.6 -3.9 4.8 4.4 43 43 A K + 0 0 162 -2,-0.5 3,-0.1 1,-0.1 30,-0.0 -0.349 28.8 111.5-123.2-156.5 -5.5 8.3 4.5 44 44 A G + 0 0 78 1,-0.2 -1,-0.1 -2,-0.1 2,-0.1 0.613 62.5 115.0 94.9 15.0 -5.1 11.5 6.5 45 45 A L - 0 0 31 27,-0.1 -1,-0.2 -3,-0.1 5,-0.0 -0.204 54.8-128.4-101.6-166.2 -3.7 13.5 3.6 46 46 A K > - 0 0 128 3,-0.1 3,-1.1 -2,-0.1 27,-0.4 -0.960 27.5 -84.1-145.6 162.3 -5.0 16.5 1.7 47 47 A P T 3 S+ 0 0 68 0, 0.0 3,-0.1 0, 0.0 25,-0.0 -0.355 107.7 31.7 -68.4 146.4 -5.6 17.7 -1.9 48 48 A G T 3 S+ 0 0 67 1,-0.2 2,-0.4 -2,-0.1 24,-0.0 0.441 98.4 103.6 88.0 0.1 -2.8 19.2 -3.9 49 49 A V < - 0 0 13 -3,-1.1 2,-0.5 -25,-0.0 24,-0.4 -0.947 54.7-155.5-120.3 138.0 -0.2 17.0 -2.2 50 50 A V - 0 0 47 -2,-0.4 -28,-1.4 22,-0.1 -27,-1.1 -0.938 10.2-173.5-114.6 129.6 1.6 13.9 -3.5 51 51 A Y E -AC 21 71A 46 20,-0.8 20,-1.6 -2,-0.5 2,-0.4 -0.454 25.3-112.9-105.0-178.2 3.1 11.2 -1.3 52 52 A E E -AC 20 70A 42 -32,-1.3 -32,-0.9 18,-0.2 2,-0.5 -0.977 26.1-165.8-123.2 130.1 5.1 8.2 -2.3 53 53 A G E +AC 19 69A 0 16,-2.3 16,-3.3 -2,-0.4 2,-0.4 -0.959 10.5 173.0-121.5 129.2 3.9 4.6 -2.0 54 54 A Q E -AC 18 68A 49 -36,-2.1 -36,-2.4 -2,-0.5 2,-0.8 -0.951 12.3-163.8-134.7 114.3 6.0 1.5 -2.2 55 55 A L E -AC 17 67A 36 12,-1.8 12,-1.3 -2,-0.4 2,-0.6 -0.847 12.1-179.9-102.0 107.0 4.6 -2.0 -1.5 56 56 A I E -AC 16 66A 16 -40,-2.6 -40,-1.8 -2,-0.8 2,-0.2 -0.920 18.1-142.7-109.5 117.7 7.4 -4.5 -0.9 57 57 A S E -A 15 0A 2 8,-1.6 7,-2.3 -2,-0.6 2,-0.4 -0.564 13.0-154.9 -81.5 140.3 6.3 -8.1 -0.2 58 58 A I E -A 14 0A 44 -44,-3.4 -44,-1.4 -2,-0.2 -45,-0.2 -0.961 9.2-171.7-119.1 132.4 8.3 -10.1 2.3 59 59 A Q > - 0 0 58 -2,-0.4 3,-0.8 -46,-0.2 4,-0.1 -0.379 50.6 -79.2-106.9-173.4 8.6 -13.9 2.5 60 60 A Q T 3 S+ 0 0 146 1,-0.3 3,-0.0 -2,-0.1 -2,-0.0 0.762 137.1 38.9 -59.9 -24.8 10.2 -16.3 5.1 61 61 A Y T 3 S- 0 0 147 1,-0.1 -1,-0.3 2,-0.1 -3,-0.0 0.485 116.9-121.1-103.4 -5.5 13.6 -15.4 3.5 62 62 A G S < S+ 0 0 17 -3,-0.8 -4,-0.1 0, 0.0 -1,-0.1 0.206 75.3 67.7 82.5 154.5 12.8 -11.7 2.9 63 63 A H + 0 0 170 -4,-0.1 -5,-0.2 -7,-0.1 3,-0.1 0.948 52.8 141.6 62.8 96.9 12.7 -9.5 -0.2 64 64 A Q + 0 0 52 -7,-2.3 2,-0.3 1,-0.4 -6,-0.2 0.502 53.6 16.1-124.1 -89.9 9.8 -10.6 -2.5 65 65 A E - 0 0 110 -8,-0.2 -8,-1.6 2,-0.0 2,-0.4 -0.737 54.4-166.5 -98.5 145.4 7.7 -8.1 -4.5 66 66 A V E +C 56 0A 79 -2,-0.3 2,-0.4 -10,-0.2 -10,-0.2 -0.955 12.6 169.4-135.0 114.5 8.5 -4.5 -5.2 67 67 A T E -C 55 0A 60 -12,-1.3 -12,-1.8 -2,-0.4 2,-0.5 -0.988 17.4-156.2-130.1 134.5 6.0 -2.0 -6.5 68 68 A R E +C 54 0A 185 -2,-0.4 2,-0.3 -14,-0.2 -14,-0.2 -0.926 20.8 167.7-111.6 127.7 6.1 1.8 -6.8 69 69 A F E -C 53 0A 36 -16,-3.3 -16,-2.3 -2,-0.5 2,-0.2 -0.926 32.0-112.5-136.1 160.6 3.0 3.9 -6.9 70 70 A D E -C 52 0A 55 -2,-0.3 2,-0.4 -18,-0.2 -18,-0.2 -0.618 28.7-141.0 -94.0 150.8 2.0 7.6 -6.7 71 71 A F E +C 51 0A 27 -20,-1.6 -20,-0.8 -2,-0.2 2,-0.3 -0.935 27.4 152.5-118.9 140.4 0.0 9.0 -3.8 72 72 A T - 0 0 26 -2,-0.4 -22,-0.1 -22,-0.2 -27,-0.1 -0.944 22.6-153.4-152.7 168.4 -2.7 11.6 -3.7 73 73 A T S S- 0 0 37 -24,-0.4 4,-0.1 -27,-0.4 -1,-0.1 0.430 77.3 -16.0-112.8-110.4 -5.7 12.5 -1.5 74 74 A T S S+ 0 0 107 2,-0.1 2,-0.3 0, 0.0 -2,-0.0 0.255 114.0 96.6 -85.4 13.5 -8.8 14.4 -2.5 75 75 A S S S- 0 0 29 -26,-0.2 2,-0.9 -29,-0.2 3,-0.0 -0.778 77.8-123.6-105.1 148.7 -7.0 15.5 -5.7 76 76 A T S S+ 0 0 150 -2,-0.3 -2,-0.1 1,-0.1 2,-0.0 -0.794 71.7 90.4 -94.9 102.9 -7.2 13.8 -9.1 77 77 A S + 0 0 63 -2,-0.9 -1,-0.1 -4,-0.1 -5,-0.1 -0.020 17.7 144.6-148.6-102.6 -3.7 12.9 -10.2 78 78 A T - 0 0 58 1,-0.2 2,-0.6 -7,-0.2 4,-0.2 0.944 40.8-157.8 45.6 64.9 -1.8 9.6 -9.7 79 79 A P + 0 0 98 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 -0.627 51.0 106.6 -77.6 116.4 -0.0 9.7 -13.1 80 80 A G S S- 0 0 52 -2,-0.6 -2,-0.0 -11,-0.0 -10,-0.0 0.200 95.1 -83.8-178.2 31.5 1.1 6.2 -14.0 81 81 A S + 0 0 102 1,-0.1 3,-0.1 2,-0.1 -3,-0.0 0.981 69.6 153.6 53.6 67.4 -1.1 4.8 -16.8 82 82 A R + 0 0 186 -4,-0.2 -1,-0.1 1,-0.2 2,-0.1 -0.101 58.7 55.9-115.0 32.8 -3.9 3.6 -14.6 83 83 A S + 0 0 110 1,-0.0 -1,-0.2 0, 0.0 -2,-0.1 -0.491 66.7 93.0-165.8 86.0 -6.7 3.9 -17.2 84 84 A H + 0 0 147 -3,-0.1 2,-0.3 -2,-0.1 -1,-0.0 0.116 58.4 103.4-166.1 27.6 -6.4 2.1 -20.5 85 85 A H - 0 0 110 2,-0.1 2,-0.2 -3,-0.1 -3,-0.0 -0.891 64.4-118.3-121.0 150.8 -8.1 -1.3 -20.1 86 86 A H S S+ 0 0 174 -2,-0.3 -2,-0.1 -3,-0.0 0, 0.0 -0.526 74.8 16.1 -86.0 153.8 -11.4 -2.6 -21.3 87 87 A H S S- 0 0 149 -2,-0.2 2,-0.3 2,-0.1 -2,-0.1 0.384 75.0-118.9 64.9 154.0 -14.2 -3.8 -19.0 88 88 A H 0 0 140 1,-0.1 -2,-0.0 0, 0.0 -1,-0.0 -0.865 360.0 360.0-126.2 160.4 -14.3 -3.1 -15.2 89 89 A H 0 0 250 -2,-0.3 -1,-0.1 0, 0.0 -2,-0.1 0.657 360.0 360.0 58.5 360.0 -14.3 -5.2 -12.1