==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSMEMBRANE CHANNEL 22-APR-99 1QG9 . COMPND 2 MOLECULE: PROTEIN (SODIUM CHANNEL PROTEIN, BRAIN II ALPHA . SOURCE 2 SYNTHETIC: YES; . AUTHOR D.J.DOAK,D.MULVEY,K.KAWAGUCHI,J.VILLALAIN,I.D.CAMPBELL . 21 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2315.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 17 81.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 19.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 57.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A N 0 0 158 0, 0.0 4,-0.1 0, 0.0 8,-0.0 0.000 360.0 360.0 360.0 95.5 -11.5 -3.2 1.1 2 2 A V - 0 0 136 2,-0.2 3,-0.1 3,-0.0 0, 0.0 0.851 360.0 -26.0-100.6 -70.2 -14.5 -0.8 1.3 3 3 A E S S+ 0 0 162 1,-0.2 2,-1.2 2,-0.1 5,-0.1 0.731 120.4 74.5-114.7 -49.8 -13.2 2.8 1.5 4 4 A Y + 0 0 171 1,-0.2 -2,-0.2 3,-0.1 -1,-0.2 -0.573 54.8 151.3 -73.5 98.0 -9.8 2.6 3.1 5 5 A T > + 0 0 73 -2,-1.2 4,-1.9 3,-0.1 -1,-0.2 0.893 69.3 23.6 -90.1 -81.9 -7.6 1.3 0.2 6 6 A F H >> S+ 0 0 129 1,-0.2 4,-1.6 2,-0.2 3,-1.1 0.966 132.8 39.2 -49.1 -67.0 -4.0 2.5 0.4 7 7 A T H 3> S+ 0 0 78 1,-0.3 4,-4.0 2,-0.2 5,-0.3 0.870 109.1 64.5 -54.0 -37.8 -4.1 3.2 4.2 8 8 A G H 3> S+ 0 0 16 1,-0.2 4,-2.6 2,-0.2 -1,-0.3 0.883 101.9 49.6 -53.6 -39.0 -6.1 -0.0 4.5 9 9 A I H X S+ 0 0 98 -4,-4.0 4,-1.6 1,-0.2 3,-0.7 0.971 116.4 43.1 -60.8 -53.5 -3.2 -0.4 8.6 12 12 A F H 3X S+ 0 0 119 -4,-2.6 4,-3.0 -5,-0.3 5,-0.2 0.800 105.6 65.6 -62.1 -29.1 -3.8 -4.1 7.9 13 13 A E H 3X S+ 0 0 88 -4,-1.5 4,-1.6 1,-0.2 -1,-0.3 0.900 100.8 49.4 -61.6 -38.1 -0.0 -4.4 7.4 14 14 A S H X S+ 0 0 68 -4,-1.6 3,-2.0 1,-0.2 4,-1.6 0.977 107.3 49.3 -55.0 -60.5 -2.2 -6.2 11.8 16 16 A I H 3X S+ 0 0 74 -4,-3.0 4,-1.6 1,-0.3 -1,-0.2 0.827 106.0 59.5 -48.4 -34.6 -0.3 -8.9 9.8 17 17 A K H 3< S+ 0 0 120 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.2 0.840 103.1 53.0 -64.5 -32.9 2.7 -7.7 11.8 18 18 A I H X< S+ 0 0 104 -3,-2.0 3,-0.7 -4,-1.3 -2,-0.2 0.981 114.3 37.6 -65.7 -59.0 0.9 -8.7 15.0 19 19 A L H 3< S+ 0 0 118 -4,-1.6 -1,-0.2 1,-0.3 -2,-0.2 0.693 132.1 33.8 -67.1 -18.3 0.0 -12.2 13.9 20 20 A A T 3< 0 0 59 -4,-1.6 -1,-0.3 -5,-0.4 -2,-0.2 -0.536 360.0 360.0-138.5 70.4 3.4 -12.5 12.2 21 21 A R < 0 0 273 -3,-0.7 -1,-0.1 -2,-0.1 -2,-0.1 0.999 360.0 360.0 -70.7 360.0 6.0 -10.4 14.1