==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-MAR-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN/DNA 04-FEB-11 3QMG . COMPND 2 MOLECULE: CPG-BINDING PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.XU,C.BIAN,F.MACKENZIE,C.BOUNTRA,J.WEIGELT,C.H.ARROWSMITH, . 52 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3784.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 18 34.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 15.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 166 A A 0 0 113 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -62.8 -15.5 -5.0 15.8 2 167 A R + 0 0 133 1,-0.1 41,-0.5 45,-0.0 2,-0.4 0.112 360.0 71.7-102.8 14.4 -13.4 -7.6 17.5 3 168 A M - 0 0 89 1,-0.1 -1,-0.1 43,-0.1 39,-0.0 -0.954 50.7-176.3-135.9 118.0 -13.2 -5.1 20.4 4 169 A C - 0 0 22 -2,-0.4 -1,-0.1 -3,-0.1 -2,-0.0 0.805 33.1-147.4 -75.5 -27.1 -15.8 -4.2 22.9 5 170 A G S S+ 0 0 48 1,-0.1 -1,-0.1 2,-0.0 -2,-0.0 0.483 80.4 76.0 75.3 6.1 -13.4 -1.7 24.4 6 171 A E S S+ 0 0 154 5,-0.0 2,-0.2 0, 0.0 -1,-0.1 0.315 71.0 88.2-127.7 -10.4 -14.9 -2.3 27.9 7 172 A C S > S- 0 0 16 1,-0.1 4,-1.3 5,-0.0 5,-0.2 -0.599 87.7-102.2 -93.3 168.9 -13.6 -5.6 29.1 8 173 A E H >> S+ 0 0 43 1,-0.2 4,-1.1 -2,-0.2 3,-0.6 0.918 122.2 50.8 -52.7 -42.2 -10.4 -6.4 31.1 9 174 A A H 34 S+ 0 0 3 1,-0.3 3,-0.5 2,-0.2 -1,-0.2 0.890 107.4 51.7 -71.2 -35.7 -8.8 -7.7 27.9 10 175 A C H 34 S+ 0 0 20 1,-0.2 -1,-0.3 32,-0.1 -2,-0.2 0.751 109.8 51.7 -70.4 -21.1 -9.6 -4.6 25.9 11 176 A R H << S+ 0 0 160 -4,-1.3 -1,-0.2 -3,-0.6 -2,-0.2 0.685 84.3 106.3 -93.2 -17.3 -8.1 -2.4 28.6 12 177 A R < - 0 0 115 -4,-1.1 -5,-0.0 -3,-0.5 3,-0.0 -0.392 41.4-178.4 -59.7 138.7 -4.8 -4.2 28.9 13 178 A T + 0 0 122 -2,-0.2 2,-0.5 2,-0.1 -1,-0.1 0.647 59.2 79.4-106.2 -12.6 -1.8 -2.4 27.4 14 179 A E S S- 0 0 153 26,-0.1 2,-0.1 2,-0.0 26,-0.1 -0.787 70.9-135.9-113.4 123.9 0.8 -5.0 28.1 15 180 A D - 0 0 34 -2,-0.5 -2,-0.1 1,-0.1 22,-0.0 -0.463 20.0-132.5 -65.6 145.6 1.5 -8.2 26.2 16 181 A C - 0 0 40 -2,-0.1 -1,-0.1 1,-0.1 -2,-0.0 0.742 22.1-144.6 -78.3 -26.0 2.1 -11.1 28.5 17 182 A G S S+ 0 0 19 1,-0.1 -1,-0.1 2,-0.0 -2,-0.1 0.423 81.4 68.9 87.1 -1.6 5.2 -12.3 26.7 18 183 A H + 0 0 157 4,-0.0 -1,-0.1 5,-0.0 2,-0.1 0.573 69.5 91.7-131.5 -17.1 4.5 -15.9 27.3 19 184 A C S > S- 0 0 22 1,-0.1 4,-2.6 4,-0.0 5,-0.2 -0.340 86.5 -99.7 -85.9 168.9 1.4 -17.2 25.4 20 185 A D H > S+ 0 0 66 1,-0.2 4,-0.9 2,-0.2 14,-0.1 0.925 124.0 49.3 -55.5 -43.9 1.5 -18.8 21.9 21 186 A F H > S+ 0 0 9 1,-0.2 4,-0.7 2,-0.2 3,-0.3 0.876 112.4 47.0 -63.4 -40.0 0.5 -15.5 20.3 22 187 A C H >4 S+ 0 0 0 1,-0.2 3,-1.3 2,-0.2 8,-0.3 0.933 107.3 55.8 -68.3 -41.3 3.2 -13.4 22.1 23 188 A R H 3< S+ 0 0 152 -4,-2.6 -1,-0.2 1,-0.3 -2,-0.2 0.697 103.2 58.3 -67.4 -18.6 6.0 -15.9 21.4 24 189 A D H 3< S+ 0 0 9 -4,-0.9 8,-2.8 -3,-0.3 -1,-0.3 0.756 85.9 98.5 -75.7 -30.3 5.1 -15.5 17.7 25 190 A M S X<>S- 0 0 29 -3,-1.3 5,-2.5 -4,-0.7 3,-2.0 -0.349 77.8-130.7 -64.9 143.7 5.8 -11.7 17.8 26 191 A K G > 5S+ 0 0 77 1,-0.3 3,-2.0 3,-0.2 -1,-0.1 0.883 107.4 67.2 -58.8 -34.7 9.1 -10.4 16.6 27 192 A K G 3 5S+ 0 0 141 1,-0.3 -1,-0.3 2,-0.1 -4,-0.1 0.699 108.1 39.3 -64.0 -14.2 9.3 -8.3 19.8 28 193 A F G < 5S- 0 0 87 -3,-2.0 -1,-0.3 -6,-0.3 -2,-0.2 0.300 128.1 -92.5-117.9 10.1 9.6 -11.6 21.6 29 194 A G T < 5S+ 0 0 71 -3,-2.0 -3,-0.2 -4,-0.3 -2,-0.1 0.441 80.4 139.6 99.5 3.7 11.9 -13.5 19.2 30 195 A G < - 0 0 16 -5,-2.5 -1,-0.2 -8,-0.3 -6,-0.2 -0.157 62.1-119.2 -83.0 172.2 9.1 -15.1 17.2 31 196 A P - 0 0 105 0, 0.0 -6,-0.1 0, 0.0 -7,-0.1 0.424 39.3-124.6 -94.9 3.6 8.8 -15.6 13.4 32 197 A N + 0 0 77 -8,-2.8 -7,-0.1 -9,-0.1 -8,-0.1 0.926 69.8 131.2 55.6 48.0 5.7 -13.5 13.0 33 198 A K S S+ 0 0 71 -9,-0.2 -1,-0.1 -8,-0.0 -8,-0.1 0.638 71.7 37.7-103.5 -16.8 3.9 -16.4 11.4 34 199 A I S S- 0 0 90 -13,-0.1 -13,-0.1 -14,-0.1 -9,-0.0 0.865 79.8-167.5-105.0 -51.7 0.6 -16.3 13.4 35 200 A R + 0 0 171 1,-0.2 2,-0.3 -14,-0.2 -13,-0.1 0.881 32.4 130.4 72.5 45.9 0.1 -12.6 13.9 36 201 A Q - 0 0 69 -15,-0.2 -1,-0.2 1,-0.0 -12,-0.1 -0.849 59.9 -89.9-121.5 162.5 -2.6 -12.3 16.6 37 202 A K - 0 0 54 -2,-0.3 -16,-0.2 1,-0.2 -15,-0.1 -0.395 59.5 -76.7 -59.0 154.2 -2.9 -10.2 19.8 38 203 A C > - 0 0 0 -17,-0.2 3,-2.1 1,-0.2 4,-0.3 -0.066 44.5-116.7 -44.5 139.8 -1.6 -11.6 23.1 39 204 A R G > S+ 0 0 68 1,-0.3 3,-0.8 2,-0.2 -1,-0.2 0.754 116.2 57.3 -50.9 -35.5 -4.1 -14.1 24.5 40 205 A L G 3 S+ 0 0 82 1,-0.2 -1,-0.3 -26,-0.1 -28,-0.2 0.534 105.1 52.7 -79.0 -5.9 -4.7 -11.8 27.5 41 206 A R G < S+ 0 0 63 -3,-2.1 2,-0.5 2,-0.1 -1,-0.2 0.339 76.6 116.0-111.5 7.6 -5.7 -9.1 25.2 42 207 A Q S < S- 0 0 12 -3,-0.8 -33,-0.2 -4,-0.3 -32,-0.1 -0.642 78.8-107.2 -83.1 118.4 -8.4 -10.9 23.2 43 208 A C > - 0 0 0 -2,-0.5 4,-1.5 -41,-0.5 -1,-0.1 -0.206 20.9-145.1 -50.3 128.0 -11.7 -9.3 23.8 44 209 A Q T 4 S+ 0 0 111 2,-0.1 -1,-0.2 1,-0.1 -41,-0.1 0.691 96.2 38.6 -71.6 -21.3 -13.8 -11.6 26.0 45 210 A L T 4 S+ 0 0 122 -43,-0.1 -1,-0.1 1,-0.0 -42,-0.1 0.921 126.7 24.1 -84.3 -60.0 -16.9 -10.6 24.2 46 211 A R T 4 S+ 0 0 121 -44,-0.1 2,-0.2 2,-0.0 -2,-0.1 0.431 90.9 102.1 -98.0 -6.7 -16.1 -10.3 20.5 47 212 A A S < S- 0 0 6 -4,-1.5 5,-0.2 1,-0.2 4,-0.0 -0.540 84.7 -85.5 -90.6 146.9 -13.0 -12.4 19.7 48 213 A R >> - 0 0 130 -2,-0.2 3,-1.4 1,-0.2 4,-0.8 -0.160 44.1-126.9 -38.9 137.6 -12.9 -15.6 18.0 49 214 A E G >4 S+ 0 0 75 1,-0.3 3,-0.6 2,-0.2 -1,-0.2 0.846 106.9 58.4 -70.5 -33.0 -13.4 -18.0 20.8 50 215 A S G 34 S+ 0 0 92 1,-0.2 -1,-0.3 2,-0.2 -2,-0.1 0.534 99.9 59.0 -77.0 -4.8 -10.3 -20.0 20.1 51 216 A Y G <4 0 0 34 -3,-1.4 -1,-0.2 -8,-0.1 -2,-0.2 0.732 360.0 360.0 -84.5 -30.3 -8.2 -16.8 20.5 52 217 A K << 0 0 111 -4,-0.8 -2,-0.2 -3,-0.6 -10,-0.1 0.937 360.0 360.0 -64.0 360.0 -9.5 -16.5 24.1