==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-MAR-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN/DNA 04-FEB-11 3QMH . COMPND 2 MOLECULE: CPG-BINDING PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.XU,C.BIAN,F.MACKENZIE,C.BOUNTRA,J.WEIGELT,C.H.ARROWSMITH, . 53 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3727.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 17 32.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 13.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 166 A A 0 0 120 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -57.0 -15.4 4.8 -15.2 2 167 A R + 0 0 129 1,-0.1 41,-0.6 45,-0.0 2,-0.4 0.042 360.0 73.5-101.1 22.0 -13.4 7.3 -17.1 3 168 A M - 0 0 91 1,-0.1 -1,-0.1 43,-0.1 39,-0.0 -0.936 50.6-174.6-141.6 121.1 -13.2 4.9 -20.1 4 169 A C - 0 0 35 -2,-0.4 -1,-0.1 -3,-0.1 -2,-0.0 0.838 34.4-142.9 -77.5 -31.1 -15.9 3.8 -22.5 5 170 A G S S+ 0 0 49 1,-0.0 -1,-0.0 2,-0.0 -2,-0.0 0.571 82.9 73.8 84.3 11.0 -13.5 1.3 -24.0 6 171 A E + 0 0 57 5,-0.0 -3,-0.0 0, 0.0 -1,-0.0 0.572 69.3 89.1-135.6 -20.7 -14.8 2.0 -27.5 7 172 A C S > S- 0 0 20 1,-0.1 4,-1.4 5,-0.0 5,-0.2 -0.203 86.9-100.9 -84.2 175.3 -13.6 5.3 -28.8 8 173 A E H > S+ 0 0 67 1,-0.2 4,-1.0 2,-0.2 3,-0.4 0.923 123.5 51.4 -57.3 -44.0 -10.4 6.1 -30.7 9 174 A A H 4 S+ 0 0 11 1,-0.2 3,-0.5 2,-0.2 -1,-0.2 0.899 109.3 48.7 -63.7 -44.1 -8.8 7.4 -27.5 10 175 A C H 4 S+ 0 0 18 1,-0.2 -1,-0.2 32,-0.1 -2,-0.2 0.749 110.8 49.8 -65.8 -32.1 -9.6 4.3 -25.6 11 176 A R H < S+ 0 0 170 -4,-1.4 -1,-0.2 -3,-0.4 -2,-0.2 0.671 89.1 103.9 -84.1 -16.1 -8.3 1.9 -28.2 12 177 A R < - 0 0 104 -4,-1.0 3,-0.0 -3,-0.5 -5,-0.0 -0.380 45.3-177.1 -74.3 135.3 -5.0 3.7 -28.6 13 178 A T + 0 0 122 -2,-0.1 2,-0.5 1,-0.1 -1,-0.1 0.507 56.1 78.3-109.8 -5.3 -2.0 2.1 -27.0 14 179 A E - 0 0 147 26,-0.1 2,-0.2 2,-0.0 -1,-0.1 -0.915 69.5-133.5-120.5 128.1 0.8 4.7 -27.6 15 180 A D - 0 0 65 -2,-0.5 -2,-0.0 1,-0.1 22,-0.0 -0.484 16.7-134.3 -73.2 142.2 1.5 7.9 -25.8 16 181 A C - 0 0 41 -2,-0.2 -1,-0.1 1,-0.1 -2,-0.0 0.826 22.2-147.4 -70.7 -28.3 2.1 10.9 -28.1 17 182 A G S S+ 0 0 18 1,-0.1 -1,-0.1 2,-0.0 -2,-0.1 0.578 80.4 74.9 77.5 7.6 5.1 12.0 -26.1 18 183 A H + 0 0 154 4,-0.0 -1,-0.1 5,-0.0 2,-0.0 0.615 66.5 89.4-129.5 -22.5 4.3 15.6 -26.9 19 184 A C S > S- 0 0 20 1,-0.1 4,-2.9 4,-0.0 5,-0.2 -0.279 88.5-102.5 -76.0 171.0 1.4 16.8 -24.9 20 185 A D H > S+ 0 0 62 1,-0.2 4,-1.0 2,-0.2 14,-0.1 0.859 123.0 51.8 -62.0 -36.9 1.8 18.4 -21.5 21 186 A F H 4 S+ 0 0 10 2,-0.2 4,-0.3 1,-0.2 15,-0.3 0.822 112.2 45.3 -72.1 -36.7 0.6 15.2 -19.8 22 187 A C H >4 S+ 0 0 0 -3,-0.2 3,-2.8 1,-0.2 8,-0.3 0.969 108.2 55.9 -67.0 -52.4 3.1 13.1 -21.7 23 188 A R H 3< S+ 0 0 160 -4,-2.9 -2,-0.2 1,-0.3 7,-0.2 0.762 104.5 57.9 -48.1 -28.1 6.0 15.6 -21.1 24 189 A D T 3< S+ 0 0 9 -4,-1.0 8,-2.6 -5,-0.2 -1,-0.3 0.652 85.5 101.0 -79.9 -20.3 5.2 15.2 -17.4 25 190 A M S X >S- 0 0 31 -3,-2.8 3,-2.1 -4,-0.3 5,-2.0 -0.429 74.5-133.3 -73.5 145.1 5.8 11.4 -17.4 26 191 A K G > 5S+ 0 0 72 1,-0.3 3,-2.9 3,-0.2 -1,-0.1 0.935 108.8 68.5 -58.9 -38.0 8.9 9.8 -16.1 27 192 A K G 3 5S+ 0 0 85 1,-0.3 -1,-0.3 2,-0.1 -4,-0.1 0.725 109.9 35.3 -46.8 -26.0 8.8 7.7 -19.2 28 193 A F G < 5S- 0 0 95 -3,-2.1 -1,-0.3 -6,-0.3 -2,-0.2 0.087 125.2 -95.5-125.5 16.0 9.5 11.0 -21.0 29 194 A G T < 5S+ 0 0 72 -3,-2.9 -3,-0.2 1,-0.2 -2,-0.1 0.193 79.6 137.5 96.5 -15.4 11.9 12.7 -18.5 30 195 A G < - 0 0 16 -5,-2.0 -1,-0.2 -8,-0.3 -6,-0.2 0.031 65.5-113.8 -64.6 172.1 9.2 14.7 -16.8 31 196 A P - 0 0 111 0, 0.0 -6,-0.1 0, 0.0 -1,-0.1 0.521 41.0-125.3 -86.7 -9.1 8.9 15.2 -13.0 32 197 A N + 0 0 71 -8,-2.6 -7,-0.1 -9,-0.1 -8,-0.1 0.937 68.8 129.0 66.5 51.8 5.7 13.2 -12.7 33 198 A K + 0 0 70 -9,-0.2 -8,-0.1 -8,-0.0 -1,-0.1 0.614 68.8 46.6-112.2 -17.0 3.7 16.0 -10.9 34 199 A I S S- 0 0 84 -10,-0.1 -13,-0.1 -14,-0.1 -9,-0.1 0.884 80.0-167.0 -92.8 -48.4 0.6 16.1 -13.1 35 200 A R + 0 0 175 1,-0.2 2,-0.3 -14,-0.2 -14,-0.1 0.952 34.1 128.1 60.3 57.4 -0.1 12.4 -13.3 36 201 A Q - 0 0 67 -15,-0.3 -1,-0.2 15,-0.0 2,-0.1 -0.948 59.5 -94.0-132.8 157.5 -2.6 12.1 -16.1 37 202 A K - 0 0 54 -2,-0.3 5,-0.2 1,-0.2 -16,-0.1 -0.389 57.1 -76.1 -52.3 148.4 -2.9 10.1 -19.3 38 203 A C >> - 0 0 0 -17,-0.2 3,-2.1 1,-0.2 4,-0.9 -0.030 43.6-120.3 -36.3 140.0 -1.8 11.3 -22.7 39 204 A R T 34 S+ 0 0 51 1,-0.3 14,-0.5 2,-0.2 3,-0.3 0.792 114.8 57.0 -64.2 -28.0 -4.3 13.8 -24.1 40 205 A L T 34 S+ 0 0 72 1,-0.2 -1,-0.3 12,-0.1 -28,-0.2 0.512 106.2 52.8 -81.0 -2.9 -4.9 11.6 -27.1 41 206 A R T <4 S+ 0 0 60 -3,-2.1 -2,-0.2 -4,-0.1 -1,-0.2 0.574 75.4 114.5-108.3 -8.5 -5.8 8.8 -24.7 42 207 A Q S < S- 0 0 14 -4,-0.9 -33,-0.2 -3,-0.3 11,-0.2 -0.396 83.1-102.5 -61.7 122.1 -8.4 10.7 -22.7 43 208 A C > - 0 0 0 -41,-0.6 4,-1.3 -2,-0.2 -1,-0.1 -0.216 22.9-139.4 -53.0 135.9 -11.7 8.9 -23.4 44 209 A Q T 4 S+ 0 0 54 1,-0.2 -1,-0.2 2,-0.1 -2,-0.1 0.842 98.2 33.3 -73.4 -20.3 -13.7 11.0 -25.9 45 210 A L T 4 S+ 0 0 127 1,-0.1 -1,-0.2 -43,-0.1 -42,-0.1 0.913 126.8 29.3 -96.0 -50.0 -16.9 10.2 -23.9 46 211 A R T 4 S+ 0 0 121 -44,-0.2 -2,-0.1 2,-0.1 -43,-0.1 0.520 91.2 107.0-100.4 -9.4 -16.1 9.9 -20.2 47 212 A A S < S- 0 0 10 -4,-1.3 2,-0.2 1,-0.1 -44,-0.0 -0.248 81.1 -91.2 -74.7 158.0 -13.1 12.1 -19.7 48 213 A R >> - 0 0 136 1,-0.1 3,-2.7 2,-0.1 4,-1.0 -0.518 39.6-126.3 -59.9 127.3 -13.0 15.5 -17.9 49 214 A E G >4 S+ 0 0 79 1,-0.3 3,-1.5 -2,-0.2 -1,-0.1 0.921 108.1 55.8 -45.2 -47.3 -13.5 18.0 -20.7 50 215 A S G 34 S+ 0 0 91 1,-0.3 -1,-0.3 -3,-0.0 -2,-0.1 0.440 98.9 61.2 -78.1 2.3 -10.3 19.9 -19.8 51 216 A Y G <4 S+ 0 0 39 -3,-2.7 -1,-0.3 2,-0.1 -2,-0.2 0.774 84.8 98.6 -88.2 -29.8 -8.2 16.8 -20.1 52 217 A K << 0 0 81 -3,-1.5 -12,-0.1 -4,-1.0 -13,-0.1 -0.013 360.0 360.0 -62.4 162.6 -9.1 16.3 -23.9 53 218 A Y 0 0 110 -14,-0.5 -1,-0.2 -11,-0.2 -2,-0.1 -0.096 360.0 360.0 -54.8 360.0 -6.7 17.6 -26.6