==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION PROTEIN 04-NOV-99 1QO6 . COMPND 2 MOLECULE: FIBRONECTIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.A.BOCQUIER,J.R.POTTS,A.R.PICKFORD,I.D.CAMPBELL . 101 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6895.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 51.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 22.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 15 14.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A Y 0 0 292 0, 0.0 2,-0.7 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 49.5 49.3 5.1 -43.5 2 2 A G + 0 0 41 1,-0.3 13,-0.1 31,-0.2 33,-0.0 -0.649 360.0 94.7 109.5 -76.0 45.6 6.0 -42.8 3 3 A H - 0 0 125 -2,-0.7 2,-0.5 10,-0.2 10,-0.3 -0.148 67.6-137.2 -52.3 145.4 44.5 3.5 -40.2 4 4 A a + 0 0 5 8,-0.5 8,-2.4 -3,-0.1 2,-0.4 -0.941 23.5 178.4-114.4 123.5 44.7 4.7 -36.6 5 5 A V B -A 11 0A 76 -2,-0.5 6,-0.2 6,-0.3 31,-0.0 -0.970 25.3-158.2-125.8 138.8 46.1 2.4 -33.8 6 6 A T - 0 0 44 4,-0.9 5,-0.1 -2,-0.4 -1,-0.1 0.212 50.0-111.6 -96.5 14.1 46.6 3.2 -30.1 7 7 A D S S+ 0 0 160 3,-0.2 4,-0.1 1,-0.1 -2,-0.0 0.577 103.6 95.7 67.5 7.6 49.1 0.4 -29.7 8 8 A S S S- 0 0 102 2,-0.2 -1,-0.1 0, 0.0 3,-0.1 0.444 110.5 -93.0-104.9 -4.8 46.4 -1.3 -27.6 9 9 A G S S+ 0 0 57 1,-0.2 2,-1.0 0, 0.0 -2,-0.0 0.005 88.3 125.0 116.9 -27.7 45.0 -3.4 -30.4 10 10 A V - 0 0 63 1,-0.1 2,-1.6 0, 0.0 -4,-0.9 -0.539 44.8-162.7 -70.3 101.0 42.3 -1.1 -31.5 11 11 A V B +A 5 0A 86 -2,-1.0 -6,-0.3 -6,-0.2 -1,-0.1 -0.594 18.7 179.2 -87.7 78.2 43.0 -0.7 -35.2 12 12 A Y - 0 0 35 -8,-2.4 -8,-0.5 -2,-1.6 2,-0.3 0.127 20.4-121.5 -64.8-172.2 40.9 2.4 -35.9 13 13 A S > - 0 0 40 -10,-0.3 3,-1.1 18,-0.0 2,-0.8 -0.994 37.7 -79.9-139.9 144.5 40.7 4.1 -39.3 14 14 A V T 3 S+ 0 0 90 -2,-0.3 18,-0.1 1,-0.3 -11,-0.1 -0.130 126.1 19.3 -43.2 87.1 41.4 7.6 -40.6 15 15 A G T 3 S+ 0 0 56 -2,-0.8 -1,-0.3 16,-0.8 17,-0.1 0.696 81.1 128.4 116.5 35.2 38.2 9.2 -39.3 16 16 A M < - 0 0 96 -3,-1.1 -2,-0.1 15,-0.3 16,-0.1 -0.360 45.5-158.8-114.9 51.4 36.9 6.8 -36.7 17 17 A Q + 0 0 122 14,-0.1 13,-0.2 1,-0.1 2,-0.2 0.075 23.6 164.4 -31.4 128.9 36.4 9.2 -33.8 18 18 A W E -B 29 0B 11 11,-2.9 11,-0.6 50,-0.0 2,-0.4 -0.764 34.3-108.9-140.5-174.6 36.3 7.3 -30.6 19 19 A L E -B 28 0B 49 9,-0.3 2,-0.3 -2,-0.2 9,-0.3 -0.989 25.5-168.9-129.6 131.0 36.5 7.8 -26.8 20 20 A K E -B 27 0B 83 7,-3.8 7,-1.3 -2,-0.4 2,-0.2 -0.874 7.0-149.9-118.4 151.1 39.4 6.8 -24.5 21 21 A T E -B 26 0B 90 -2,-0.3 5,-0.2 5,-0.2 -2,-0.0 -0.703 13.4-149.2-114.6 167.4 39.6 6.6 -20.7 22 22 A Q - 0 0 74 3,-2.1 4,-0.1 -2,-0.2 -1,-0.0 -0.021 58.8 -94.0-124.3 27.8 42.5 7.0 -18.3 23 23 A G S S+ 0 0 75 2,-0.2 3,-0.1 1,-0.2 -2,-0.0 0.714 121.1 20.4 67.6 19.8 41.3 4.7 -15.5 24 24 A N S S+ 0 0 155 1,-0.6 2,-0.3 0, 0.0 -1,-0.2 0.156 118.2 57.4 179.5 -35.2 39.7 7.6 -13.8 25 25 A K S S- 0 0 123 2,-0.0 -3,-2.1 0, 0.0 -1,-0.6 -0.787 72.8-121.4-115.9 160.0 39.2 10.5 -16.3 26 26 A Q E +B 21 0B 78 -2,-0.3 15,-2.3 -5,-0.2 2,-0.3 -0.695 30.1 170.3 -99.5 152.1 37.3 10.7 -19.6 27 27 A M E -BC 20 40B 24 -7,-1.3 -7,-3.8 -2,-0.3 2,-0.6 -0.854 27.3-138.5-164.8 125.5 38.9 11.6 -23.0 28 28 A L E -BC 19 39B 19 11,-1.8 11,-3.0 -9,-0.3 2,-0.4 -0.766 24.5-163.7 -89.4 118.1 37.7 11.6 -26.6 29 29 A b E +BC 18 38B 5 -2,-0.6 -11,-2.9 -11,-0.6 2,-0.3 -0.852 11.0 174.9-106.3 138.4 40.4 10.3 -29.0 30 30 A T E - C 0 37B 27 7,-4.2 7,-2.1 -2,-0.4 2,-0.7 -0.977 26.6-136.4-140.2 152.8 40.3 10.7 -32.7 31 31 A a + 0 0 3 -2,-0.3 -16,-0.8 5,-0.3 -15,-0.3 -0.898 29.6 164.7-114.3 103.7 42.6 10.0 -35.7 32 32 A L - 0 0 89 -2,-0.7 -1,-0.2 -18,-0.1 4,-0.1 0.884 57.3 -78.1 -79.5 -96.9 42.8 12.9 -38.2 33 33 A G S S+ 0 0 69 -19,-0.1 -31,-0.2 -18,-0.0 -19,-0.1 0.513 120.5 54.6-142.0 -40.6 45.7 12.6 -40.6 34 34 A N S S- 0 0 145 1,-0.0 2,-0.2 0, 0.0 -3,-0.0 0.751 126.3 -67.6 -73.1 -24.0 48.9 13.7 -39.0 35 35 A G S S- 0 0 35 -33,-0.0 2,-0.3 -5,-0.0 -3,-0.1 -0.741 75.1 -42.4 175.9-123.5 48.3 11.2 -36.2 36 36 A V + 0 0 63 -5,-0.2 -5,-0.3 -2,-0.2 2,-0.2 -0.927 49.7 175.1-146.3 117.2 45.8 10.8 -33.4 37 37 A S E -C 30 0B 68 -7,-2.1 -7,-4.2 -2,-0.3 2,-0.3 -0.547 7.1-164.4-112.0 178.5 44.5 13.5 -31.1 38 38 A b E -C 29 0B 42 -9,-0.3 2,-0.6 -2,-0.2 -9,-0.3 -0.957 22.5-115.5-156.0 171.1 41.9 13.6 -28.3 39 39 A Q E -C 28 0B 129 -11,-3.0 -11,-1.8 -2,-0.3 -10,-0.0 -0.915 31.5-130.0-121.3 105.2 39.8 16.0 -26.2 40 40 A E E S-C 27 0B 141 -2,-0.6 2,-2.5 1,-0.2 -13,-0.2 -0.233 88.7 -7.8 -52.8 132.4 40.5 15.9 -22.4 41 41 A T S S- 0 0 73 -15,-2.3 2,-3.2 1,-0.1 -1,-0.2 -0.255 79.2-164.5 75.4 -53.6 37.3 15.5 -20.4 42 42 A A + 0 0 13 -2,-2.5 28,-0.2 1,-0.1 -1,-0.1 -0.313 62.9 77.4 71.5 -62.2 35.2 15.9 -23.5 43 43 A V - 0 0 47 -2,-3.2 2,-0.3 26,-0.2 -1,-0.1 0.026 68.3-154.8 -67.4-178.8 32.1 16.5 -21.4 44 44 A T - 0 0 33 -3,-0.1 -1,-0.0 54,-0.0 -3,-0.0 -0.984 29.5 -71.5-157.0 162.0 31.3 19.8 -19.7 45 45 A Q - 0 0 154 -2,-0.3 53,-0.9 1,-0.1 2,-0.5 -0.272 46.0-147.0 -58.0 139.4 29.3 21.3 -16.8 46 46 A T + 0 0 33 51,-0.2 2,-0.3 6,-0.1 51,-0.2 -0.949 18.3 178.7-116.9 128.2 25.6 21.2 -17.3 47 47 A Y - 0 0 105 -2,-0.5 49,-1.0 49,-0.1 6,-0.4 -0.945 50.7 -39.4-127.8 148.6 23.2 23.9 -15.9 48 48 A G S > >S+ 0 0 30 4,-0.4 5,-1.3 -2,-0.3 3,-0.9 0.008 81.4 116.9 37.5-134.8 19.5 24.4 -16.1 49 49 A G T 3 5S- 0 0 40 1,-0.2 46,-0.2 46,-0.2 -1,-0.1 -0.709 96.5 -37.3 85.1-118.9 18.2 23.5 -19.5 50 50 A N T 3 5S+ 0 0 93 44,-1.7 -1,-0.2 -2,-0.6 45,-0.2 0.471 145.6 36.8-120.0 -11.8 15.8 20.5 -19.5 51 51 A S T < 5S- 0 0 24 -3,-0.9 -2,-0.2 43,-0.5 44,-0.1 0.199 101.5-121.5-124.5 11.3 17.4 18.4 -16.8 52 52 A N T 5S- 0 0 137 -4,-0.2 -4,-0.4 42,-0.2 -3,-0.2 0.815 79.0 -46.3 50.4 32.2 18.6 21.2 -14.5 53 53 A G S S-D 65 0C 40 3,-1.0 3,-1.6 -2,-0.5 -2,-0.0 -0.993 70.2 -1.9-139.7 130.3 21.2 13.6 -32.7 63 63 A N T 3 S- 0 0 117 -2,-0.4 3,-0.1 1,-0.3 -1,-0.1 0.528 130.9 -58.7 71.0 4.3 20.1 14.6 -36.2 64 64 A G T 3 S+ 0 0 67 1,-0.4 -1,-0.3 0, 0.0 2,-0.1 0.217 122.3 87.3 108.8 -13.6 21.6 11.2 -37.3 65 65 A R E < S-D 62 0C 101 -3,-1.6 -3,-1.0 1,-0.0 -1,-0.4 -0.237 72.9-110.2-103.1-166.6 25.1 11.9 -36.1 66 66 A T E -D 61 0C 74 -5,-0.3 2,-0.4 -2,-0.1 -5,-0.2 -0.941 18.2-166.5-131.6 153.3 26.9 11.3 -32.8 67 67 A F E -D 60 0C 20 -7,-1.9 -7,-1.9 -2,-0.3 4,-0.1 -0.944 13.7-166.2-143.7 118.3 28.2 13.5 -30.0 68 68 A Y S S+ 0 0 52 -2,-0.4 2,-0.3 -9,-0.3 -10,-0.2 0.378 82.2 4.0 -81.9 4.9 30.5 12.4 -27.2 69 69 A S S S- 0 0 24 1,-0.3 -26,-0.2 -9,-0.1 -9,-0.1 -0.934 104.8 -34.5-166.5-173.7 29.8 15.7 -25.4 70 70 A d + 0 0 18 -2,-0.3 -1,-0.3 -28,-0.2 2,-0.3 0.147 57.5 171.9 -47.7 172.9 27.7 19.0 -25.5 71 71 A T B -E 81 0D 22 10,-1.1 10,-1.8 8,-0.1 3,-0.2 -0.926 39.7-136.7 179.6 157.5 26.9 20.6 -28.8 72 72 A T + 0 0 44 -2,-0.3 3,-0.4 8,-0.2 8,-0.1 -0.204 68.7 111.8-119.8 40.3 24.9 23.4 -30.4 73 73 A E S S+ 0 0 94 1,-0.2 -1,-0.1 8,-0.2 7,-0.1 0.301 73.6 58.8 -94.0 7.7 23.6 21.5 -33.5 74 74 A G S S+ 0 0 34 -3,-0.2 2,-0.3 7,-0.0 -1,-0.2 0.394 107.3 40.0-114.7 -0.4 20.1 21.6 -32.2 75 75 A R - 0 0 72 -3,-0.4 -3,-0.0 4,-0.1 5,-0.0 -0.879 64.6-135.4-141.1 172.3 19.6 25.4 -31.9 76 76 A Q S S+ 0 0 206 -2,-0.3 -3,-0.1 -3,-0.0 -4,-0.0 0.108 93.4 69.4-116.5 18.4 20.5 28.6 -33.8 77 77 A D S S- 0 0 79 2,-0.1 -5,-0.0 -5,-0.0 -1,-0.0 0.849 100.8-114.1-100.1 -53.1 21.6 30.6 -30.8 78 78 A G + 0 0 43 1,-0.2 2,-0.6 -7,-0.1 -6,-0.1 0.533 59.4 146.5 124.4 17.7 24.9 28.9 -29.8 79 79 A H - 0 0 95 -7,-0.1 -1,-0.2 -8,-0.0 -2,-0.1 -0.761 46.9-128.4 -89.2 117.8 24.1 27.4 -26.4 80 80 A L E + F 0 97D 44 -2,-0.6 17,-1.9 17,-0.6 2,-0.3 -0.396 36.0 173.6 -65.0 135.5 25.9 24.2 -25.7 81 81 A W E -EF 71 96D 3 -10,-1.8 -10,-1.1 15,-0.3 15,-0.3 -0.978 14.3-164.3-144.3 155.8 23.6 21.3 -24.6 82 82 A c E - F 0 95D 0 13,-3.4 13,-2.7 -2,-0.3 2,-0.3 -0.774 22.5-107.5-132.0 176.5 23.9 17.6 -23.9 83 83 A S E - F 0 94D 0 11,-0.3 -26,-3.4 -2,-0.2 11,-0.2 -0.826 16.6-175.0-110.5 149.0 21.6 14.6 -23.5 84 84 A T S S+ 0 0 16 9,-2.2 2,-0.5 -28,-0.3 10,-0.1 0.437 72.7 62.3-117.1 -6.9 20.7 12.7 -20.3 85 85 A T S S- 0 0 36 8,-0.8 -1,-0.2 1,-0.1 3,-0.2 -0.978 77.4-134.4-127.2 122.0 18.7 9.9 -21.8 86 86 A S S S+ 0 0 103 -2,-0.5 2,-0.7 1,-0.3 -25,-0.3 0.773 108.3 54.9 -39.9 -29.3 20.1 7.4 -24.3 87 87 A N >> + 0 0 85 1,-0.2 4,-2.5 -27,-0.1 3,-0.8 -0.708 59.8 152.1-111.2 79.4 16.8 8.1 -26.2 88 88 A Y T 34 S+ 0 0 24 -2,-0.7 4,-0.3 1,-0.2 -1,-0.2 0.754 73.5 62.3 -76.8 -24.8 16.8 11.9 -26.6 89 89 A E T 34 S+ 0 0 122 -3,-0.2 -1,-0.2 -28,-0.2 -2,-0.1 0.510 116.8 31.0 -77.6 -4.2 14.7 11.5 -29.8 90 90 A Q T <4 S+ 0 0 135 -3,-0.8 -2,-0.2 -5,-0.1 -1,-0.2 0.653 134.9 25.4-119.6 -38.1 12.0 10.0 -27.6 91 91 A D S < S- 0 0 53 -4,-2.5 -3,-0.2 -6,-0.2 -2,-0.1 0.835 79.2-152.6 -95.8 -43.7 12.4 11.7 -24.2 92 92 A Q + 0 0 82 -5,-0.5 2,-0.7 -4,-0.3 -4,-0.2 0.529 35.8 158.1 79.9 6.2 14.1 15.0 -25.4 93 93 A K + 0 0 94 -6,-0.3 -9,-2.2 -42,-0.0 -8,-0.8 -0.520 15.0 152.7 -68.1 108.1 15.7 15.2 -21.9 94 94 A Y E -F 83 0D 38 -2,-0.7 -44,-1.7 -11,-0.2 -43,-0.5 -0.892 29.7-150.8-135.3 165.7 18.7 17.5 -22.5 95 95 A S E -F 82 0D 0 -13,-2.7 -13,-3.4 -2,-0.3 -46,-0.2 -0.893 17.3-118.1-134.3 163.3 20.9 19.9 -20.6 96 96 A F E -F 81 0D 31 -49,-1.0 2,-0.3 -48,-0.4 -15,-0.3 -0.293 21.6-149.8 -93.0-179.1 23.0 23.0 -21.3 97 97 A d E -F 80 0D 2 -17,-1.9 -17,-0.6 -51,-0.2 -51,-0.2 -0.992 14.0-164.6-154.2 147.2 26.7 23.7 -21.0 98 98 A T > + 0 0 47 -53,-0.9 2,-2.2 -2,-0.3 3,-0.5 0.889 20.9 159.6 -94.7 -73.4 29.0 26.6 -20.3 99 99 A D T 3 S+ 0 0 114 1,-0.3 -1,-0.1 -54,-0.1 -54,-0.0 -0.359 86.5 2.2 80.5 -59.3 32.6 25.7 -21.2 100 100 A H T 3 0 0 170 -2,-2.2 -1,-0.3 1,-0.4 -2,-0.1 0.646 360.0 360.0-119.6 -73.9 33.6 29.4 -21.5 101 101 A T < 0 0 171 -3,-0.5 -1,-0.4 0, 0.0 0, 0.0 -0.959 360.0 360.0-154.8 360.0 30.9 31.9 -20.6