==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOME 05-SEP-03 1QXF . COMPND 2 MOLECULE: 30S RIBOSOMAL PROTEIN S27E; . SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; . AUTHOR C.HERVE DU PENHOAT,H.S.ATREYA,Y.SHEN,G.LIU,T.B.ACTON,R.XIAO, . 58 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4711.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 27 46.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 31.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 13.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 250 0, 0.0 2,-0.5 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -69.6 5.8 -7.7 -14.7 2 2 A H - 0 0 153 1,-0.0 2,-0.1 0, 0.0 0, 0.0 -0.753 360.0-127.7 -90.8 130.0 8.2 -5.4 -13.0 3 3 A S - 0 0 89 -2,-0.5 2,-0.3 17,-0.0 19,-0.1 -0.437 27.8-168.0 -75.2 149.2 7.3 -4.4 -9.5 4 4 A R - 0 0 134 17,-0.2 17,-1.0 -2,-0.1 2,-0.3 -0.835 21.9-102.7-133.0 169.9 7.2 -0.7 -8.5 5 5 A F E -A 20 0A 49 -2,-0.3 2,-0.4 49,-0.2 49,-0.2 -0.760 33.0-179.6 -98.4 142.2 7.0 1.5 -5.5 6 6 A V E -A 19 0A 14 13,-1.0 13,-1.4 -2,-0.3 2,-0.5 -0.993 20.4-139.1-143.9 132.6 3.8 3.2 -4.4 7 7 A K E +AB 18 52A 62 45,-3.0 44,-2.0 -2,-0.4 45,-1.1 -0.806 29.1 173.6 -94.8 127.0 3.1 5.4 -1.4 8 8 A V E -AB 17 50A 4 9,-3.6 9,-4.4 -2,-0.5 2,-0.4 -0.822 20.5-141.8-127.6 166.7 -0.2 4.9 0.4 9 9 A K E -AB 16 49A 58 40,-1.8 40,-0.9 7,-0.3 7,-0.3 -0.998 23.2-115.7-134.6 136.0 -1.8 6.2 3.5 10 10 A C > - 0 0 2 5,-3.7 4,-1.5 -2,-0.4 38,-0.1 -0.535 17.1-157.8 -71.5 129.0 -4.0 4.4 6.1 11 11 A P T 4 S+ 0 0 69 0, 0.0 -1,-0.2 0, 0.0 37,-0.1 0.839 96.2 33.7 -74.9 -35.6 -7.5 5.8 6.1 12 12 A D T 4 S+ 0 0 108 1,-0.1 -2,-0.1 3,-0.1 24,-0.0 0.871 128.2 38.0 -85.0 -43.1 -8.2 4.5 9.6 13 13 A C T 4 S- 0 0 30 2,-0.1 3,-0.1 1,-0.1 -1,-0.1 0.842 91.5-151.4 -75.1 -35.4 -4.6 5.0 10.9 14 14 A E < + 0 0 144 -4,-1.5 2,-0.3 1,-0.3 -1,-0.1 0.536 54.1 126.7 74.0 6.4 -4.3 8.2 8.9 15 15 A H - 0 0 100 1,-0.0 -5,-3.7 -6,-0.0 2,-0.3 -0.683 63.6-115.6 -97.1 151.1 -0.6 7.4 8.7 16 16 A E E +A 9 0A 89 -7,-0.3 2,-0.3 -2,-0.3 -7,-0.3 -0.684 38.9 171.4 -88.2 137.5 1.4 7.3 5.5 17 17 A Q E -A 8 0A 48 -9,-4.4 -9,-3.6 -2,-0.3 2,-0.5 -0.952 28.3-132.4-142.6 160.1 2.9 4.0 4.5 18 18 A V E +A 7 0A 51 -2,-0.3 2,-0.3 -11,-0.2 -11,-0.2 -0.968 33.2 162.5-120.4 117.9 4.7 2.5 1.5 19 19 A I E -A 6 0A 10 -13,-1.4 -13,-1.0 -2,-0.5 2,-0.2 -0.831 38.9 -95.6-128.7 166.6 3.6 -0.8 0.2 20 20 A F E -A 5 0A 145 -2,-0.3 2,-0.7 -15,-0.1 -15,-0.1 -0.523 38.5-109.8 -83.7 150.5 4.1 -2.8 -3.0 21 21 A D S S- 0 0 47 -17,-1.0 -17,-0.2 1,-0.3 24,-0.1 -0.718 99.2 -0.9 -83.8 116.5 1.6 -2.7 -5.8 22 22 A H S S- 0 0 106 -2,-0.7 -1,-0.3 21,-0.1 21,-0.1 0.992 90.4-173.1 68.1 64.6 -0.1 -6.1 -6.1 23 23 A P - 0 0 24 0, 0.0 21,-0.3 0, 0.0 20,-0.1 0.069 28.0-132.5 -75.0-169.5 1.7 -7.9 -3.2 24 24 A S S S+ 0 0 111 1,-0.1 2,-0.2 2,-0.1 18,-0.1 0.661 83.8 51.0-116.0 -35.8 1.5 -11.5 -2.3 25 25 A T S S- 0 0 111 1,-0.1 -1,-0.1 13,-0.1 2,-0.1 -0.678 97.5 -86.9-105.3 160.4 1.1 -11.3 1.5 26 26 A I - 0 0 81 -2,-0.2 2,-0.7 12,-0.1 12,-0.2 -0.388 39.0-132.9 -65.6 139.4 -1.4 -9.3 3.5 27 27 A V E -C 37 0B 22 10,-2.1 9,-2.6 -2,-0.1 10,-1.2 -0.871 22.6-167.1-100.6 113.7 -0.2 -5.8 4.3 28 28 A K E -C 35 0B 110 -2,-0.7 7,-0.2 7,-0.2 2,-0.1 -0.824 33.5 -99.4-102.7 139.1 -0.7 -4.9 8.0 29 29 A C - 0 0 5 5,-3.1 6,-0.1 -2,-0.4 -1,-0.1 -0.356 23.4-144.7 -56.8 122.7 -0.4 -1.3 9.2 30 30 A I S S+ 0 0 114 1,-0.1 -1,-0.2 3,-0.1 -2,-0.0 0.611 96.4 62.2 -65.2 -10.8 3.1 -1.0 10.7 31 31 A I S S- 0 0 83 3,-0.1 -1,-0.1 -16,-0.1 -3,-0.0 0.973 135.0 -18.9 -76.4 -79.0 1.3 1.2 13.1 32 32 A C S S- 0 0 115 2,-0.1 -2,-0.1 0, 0.0 -4,-0.0 0.842 96.9-101.1 -96.7 -48.8 -1.2 -0.9 14.9 33 33 A G + 0 0 34 1,-0.2 2,-0.3 -6,-0.0 -3,-0.1 0.560 63.7 153.8 129.1 32.1 -1.4 -3.8 12.5 34 34 A R - 0 0 87 -6,-0.1 -5,-3.1 1,-0.1 2,-0.2 -0.637 54.2 -94.5 -89.8 146.6 -4.6 -3.1 10.5 35 35 A T E +C 28 0B 75 -2,-0.3 -7,-0.2 -7,-0.2 3,-0.1 -0.404 47.2 164.9 -61.5 124.6 -5.2 -4.3 7.0 36 36 A V E + 0 0 6 -9,-2.6 11,-1.1 1,-0.4 2,-0.3 0.609 69.1 18.3-112.5 -25.6 -4.2 -1.6 4.5 37 37 A A E -CD 27 46B 0 -10,-1.2 -10,-2.1 9,-0.2 -1,-0.4 -0.986 64.8-156.6-150.8 138.5 -4.0 -3.8 1.4 38 38 A E E - D 0 45B 84 7,-1.9 7,-2.8 -2,-0.3 -12,-0.1 -0.951 15.8-149.2-120.9 138.4 -5.4 -7.2 0.5 39 39 A P + 0 0 24 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.661 40.1 173.8 -75.0 -17.2 -4.1 -9.6 -2.1 40 40 A T - 0 0 87 1,-0.2 2,-1.4 5,-0.1 3,-0.1 0.119 57.3 -23.9 39.0-159.2 -7.6 -10.9 -2.6 41 41 A G S S- 0 0 75 1,-0.2 -1,-0.2 2,-0.1 -3,-0.0 -0.652 123.3 -38.1 -83.5 89.4 -8.1 -13.3 -5.4 42 42 A G S S+ 0 0 52 -2,-1.4 -1,-0.2 -18,-0.1 -18,-0.0 0.543 120.6 49.1 67.1 139.5 -5.2 -12.5 -7.7 43 43 A K S S- 0 0 170 -21,-0.1 -21,-0.1 -3,-0.1 -2,-0.1 0.912 86.8-116.6 63.3 100.8 -4.0 -9.0 -8.3 44 44 A G - 0 0 3 -21,-0.3 2,-0.4 -4,-0.1 -4,-0.1 -0.367 27.6-154.2 -67.8 144.5 -3.5 -7.2 -5.0 45 45 A N E -D 38 0B 101 -7,-2.8 -7,-1.9 -24,-0.1 2,-0.7 -0.976 14.3-127.1-125.3 136.7 -5.6 -4.2 -4.3 46 46 A I E -D 37 0B 27 -2,-0.4 -9,-0.2 -9,-0.2 2,-0.1 -0.734 14.0-165.6 -85.0 115.6 -4.8 -1.3 -2.0 47 47 A K + 0 0 124 -11,-1.1 2,-0.3 -2,-0.7 -10,-0.1 -0.174 66.3 76.1 -92.0 39.4 -7.6 -0.8 0.5 48 48 A A S S- 0 0 15 -2,-0.1 2,-0.6 -38,-0.1 -38,-0.2 -0.945 95.7 -83.6-144.9 162.8 -6.2 2.6 1.4 49 49 A E E -B 9 0A 141 -40,-0.9 -40,-1.8 -2,-0.3 2,-0.3 -0.591 45.2-142.7 -73.3 114.7 -6.0 6.1 -0.1 50 50 A I E -B 8 0A 83 -2,-0.6 -42,-0.2 -42,-0.2 3,-0.1 -0.611 19.6-177.3 -81.0 136.4 -3.1 6.2 -2.5 51 51 A I E - 0 0 73 -44,-2.0 2,-0.3 1,-0.4 -1,-0.2 0.890 48.9 -77.5 -95.1 -63.0 -1.1 9.4 -2.6 52 52 A E E -B 7 0A 134 -45,-1.1 -45,-3.0 0, 0.0 -1,-0.4 -0.957 61.5 -39.4-179.3-170.5 1.5 8.9 -5.3 53 53 A Y - 0 0 151 -2,-0.3 2,-0.2 -47,-0.2 -47,-0.2 -0.439 53.4-132.1 -75.4 148.0 4.8 7.2 -6.1 54 54 A V - 0 0 7 -49,-0.2 -49,-0.2 2,-0.1 -1,-0.1 -0.640 8.4-136.9 -99.3 158.2 7.6 7.1 -3.6 55 55 A D S S+ 0 0 150 -2,-0.2 2,-1.7 1,-0.1 -1,-0.1 0.566 79.2 103.9 -87.2 -11.6 11.3 7.9 -4.2 56 56 A Q - 0 0 135 2,-0.0 -2,-0.1 0, 0.0 -1,-0.1 -0.569 58.2-174.5 -75.2 88.9 12.3 4.9 -2.2 57 57 A I 0 0 125 -2,-1.7 -2,-0.1 1,-0.1 -53,-0.1 -0.250 360.0 360.0 -78.8 170.9 13.3 2.6 -5.1 58 58 A E 0 0 210 -2,-0.0 -1,-0.1 -53,-0.0 -2,-0.0 -0.700 360.0 360.0 -86.5 360.0 14.3 -1.0 -4.7