==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 03-OCT-03 1R48 . COMPND 2 MOLECULE: PROLINE/BETAINE TRANSPORTER; . SOURCE 2 SYNTHETIC: YES; . AUTHOR D.L.ZOETEWEY,B.P.TRIPET,T.G.KUTATELADZE,M.J.OVERDUIN, . 66 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5720.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 87.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 48 72.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A C 0 0 185 0, 0.0 4,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 171.7 12.2 24.6 -2.9 2 2 A G > - 0 0 57 2,-0.1 2,-2.2 3,-0.1 3,-1.0 -0.085 360.0-145.8 96.1 -35.0 8.6 23.8 -2.3 3 3 A G T 3 S- 0 0 60 1,-0.3 4,-0.1 2,-0.1 -1,-0.1 -0.471 81.9 -9.3 74.4 -77.9 9.2 23.2 1.4 4 4 A D T 3> S+ 0 0 87 -2,-2.2 4,-2.2 2,-0.1 5,-0.3 0.180 94.7 118.7-137.5 13.7 6.6 20.4 1.9 5 5 A N H <> S+ 0 0 114 -3,-1.0 4,-0.9 1,-0.2 -2,-0.1 0.806 89.2 42.7 -52.0 -28.5 4.8 20.5 -1.4 6 6 A I H > S+ 0 0 36 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.887 106.0 59.1 -83.6 -44.8 6.2 16.9 -1.7 7 7 A E H > S+ 0 0 93 1,-0.2 4,-1.7 2,-0.2 -2,-0.2 0.787 107.4 50.7 -55.0 -28.3 5.4 15.9 1.9 8 8 A Q H X S+ 0 0 142 -4,-2.2 4,-1.2 2,-0.2 -1,-0.2 0.893 107.2 51.3 -77.0 -41.9 1.8 16.7 1.1 9 9 A K H X S+ 0 0 136 -4,-0.9 4,-1.3 -5,-0.3 -2,-0.2 0.878 112.9 46.5 -62.5 -39.0 1.7 14.6 -2.1 10 10 A I H X S+ 0 0 6 -4,-2.5 4,-3.3 2,-0.2 5,-0.3 0.915 101.8 62.9 -70.8 -43.5 3.1 11.7 -0.1 11 11 A D H X S+ 0 0 101 -4,-1.7 4,-1.0 1,-0.3 -1,-0.2 0.853 103.6 52.7 -49.6 -34.0 0.7 12.1 2.8 12 12 A D H >X S+ 0 0 112 -4,-1.2 4,-0.9 2,-0.2 3,-0.7 0.944 109.7 46.3 -66.7 -47.6 -2.0 11.4 0.2 13 13 A I H >X S+ 0 0 17 -4,-1.3 4,-3.3 1,-0.2 3,-1.5 0.930 103.6 62.6 -59.8 -47.0 -0.2 8.2 -0.9 14 14 A D H 3X S+ 0 0 71 -4,-3.3 4,-1.2 1,-0.3 -1,-0.2 0.812 103.0 51.7 -48.6 -32.6 0.3 7.1 2.7 15 15 A H H X S+ 0 0 19 -4,-1.6 4,-1.6 2,-0.2 3,-0.9 0.953 109.8 54.6 -67.3 -51.8 -4.5 -1.6 0.2 21 21 A Q H 3X S+ 0 0 124 -4,-1.4 4,-1.8 1,-0.3 -1,-0.2 0.825 107.1 53.7 -51.6 -33.9 -2.6 -3.2 3.1 22 22 A A H 3X S+ 0 0 57 -4,-2.1 4,-2.1 1,-0.2 -1,-0.3 0.840 103.9 54.8 -70.8 -34.0 -6.0 -3.3 5.0 23 23 A K H < S+ 0 0 55 -4,-1.8 3,-1.3 -3,-0.3 -2,-0.2 0.927 99.6 59.4 -62.8 -44.3 -6.4 -13.1 5.2 29 29 A Q H 3< S+ 0 0 143 -4,-2.5 -1,-0.2 1,-0.3 -2,-0.2 0.844 102.2 55.8 -52.1 -33.2 -8.7 -13.3 8.2 30 30 A Q H 3< S+ 0 0 144 -4,-1.1 -1,-0.3 -3,-0.3 -2,-0.2 0.826 125.6 20.4 -68.9 -31.9 -11.2 -14.9 5.8 31 31 A H << + 0 0 17 -3,-1.3 -1,-0.3 -4,-1.0 -2,-0.2 -0.575 67.7 155.4-139.5 73.9 -8.5 -17.6 5.0 32 32 A P 0 0 81 0, 0.0 -3,-0.1 0, 0.0 -1,-0.1 0.782 360.0 360.0 -69.3 -27.4 -5.9 -17.8 7.8 33 33 A R 0 0 258 -5,-0.1 -2,-0.1 -3,-0.1 -4,-0.1 0.446 360.0 360.0-115.2 360.0 -5.1 -21.3 6.8 34 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 35 1 B C 0 0 195 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 34.9 -15.8 -23.9 -0.7 36 2 B G + 0 0 40 1,-0.0 4,-0.1 3,-0.0 0, 0.0 -0.347 360.0 163.4-167.4 77.0 -12.7 -21.7 -0.8 37 3 B G S S- 0 0 61 1,-0.1 4,-0.1 2,-0.1 -1,-0.0 0.997 86.8 -31.5 -60.5 -72.5 -9.2 -23.3 -0.8 38 4 B D S > S+ 0 0 88 2,-0.1 4,-2.0 3,-0.1 5,-0.2 0.192 99.5 117.5-135.6 12.6 -7.0 -20.4 -1.9 39 5 B N H > S+ 0 0 128 1,-0.2 4,-1.1 2,-0.2 -2,-0.1 0.807 88.0 44.8 -51.9 -28.6 -9.4 -18.4 -4.1 40 6 B I H > S+ 0 0 31 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.894 105.0 58.5 -81.2 -45.0 -8.9 -15.7 -1.5 41 7 B E H > S+ 0 0 97 1,-0.2 4,-1.6 2,-0.2 -2,-0.2 0.782 107.4 51.0 -55.5 -27.9 -5.2 -16.1 -1.3 42 8 B Q H X S+ 0 0 134 -4,-2.0 4,-1.2 2,-0.2 -1,-0.2 0.903 107.0 51.1 -76.8 -43.4 -5.1 -15.3 -5.0 43 9 B K H X S+ 0 0 136 -4,-1.1 4,-1.3 -5,-0.2 -2,-0.2 0.882 112.8 47.0 -61.2 -39.6 -7.2 -12.2 -4.7 44 10 B I H X S+ 0 0 6 -4,-2.4 4,-3.3 2,-0.2 5,-0.3 0.916 101.2 63.3 -69.8 -43.5 -4.9 -10.9 -2.0 45 11 B D H X S+ 0 0 104 -4,-1.6 4,-1.0 1,-0.3 -1,-0.2 0.853 103.2 52.8 -49.2 -34.1 -1.7 -11.6 -3.9 46 12 B D H >X S+ 0 0 101 -4,-1.2 4,-0.9 2,-0.2 3,-0.7 0.946 109.5 46.6 -66.4 -47.8 -3.1 -9.1 -6.4 47 13 B I H >X S+ 0 0 16 -4,-1.3 4,-3.3 1,-0.3 3,-1.6 0.927 103.2 63.0 -59.4 -46.5 -3.5 -6.5 -3.6 48 14 B D H 3X S+ 0 0 71 -4,-3.3 4,-1.2 1,-0.3 -1,-0.3 0.817 102.6 51.7 -48.5 -33.1 -0.0 -7.3 -2.3 49 15 B H H X S+ 0 0 21 -4,-1.6 4,-1.7 2,-0.2 3,-0.9 0.956 110.2 53.6 -68.4 -52.3 2.0 2.7 -3.4 55 21 B Q H 3X S+ 0 0 121 -4,-1.4 4,-1.6 1,-0.3 -1,-0.2 0.823 107.9 53.6 -52.3 -33.4 4.5 2.3 -0.6 56 22 B A H 3X S+ 0 0 57 -4,-2.2 4,-2.0 1,-0.2 -1,-0.3 0.829 104.4 54.4 -71.8 -32.8 7.2 2.6 -3.2 57 23 B K H < S+ 0 0 53 -4,-1.7 3,-1.2 -3,-0.4 -2,-0.2 0.925 99.9 60.1 -63.6 -44.1 10.7 11.2 0.3 63 29 B Q H 3< S+ 0 0 139 -4,-2.5 -1,-0.2 1,-0.3 -2,-0.2 0.834 102.7 54.8 -52.0 -32.2 14.1 10.8 -1.3 64 30 B Q H 3< S+ 0 0 144 -4,-1.1 -1,-0.3 -3,-0.4 -2,-0.2 0.822 126.8 19.2 -71.1 -31.8 13.2 14.0 -3.1 65 31 B H << + 0 0 20 -3,-1.2 -1,-0.3 -4,-1.0 -2,-0.2 -0.532 68.9 152.8-139.9 70.5 12.6 15.7 0.3 66 32 B P 0 0 87 0, 0.0 -3,-0.1 0, 0.0 -1,-0.1 0.781 360.0 360.0 -69.1 -27.4 14.3 13.7 3.1 67 33 B R 0 0 248 -5,-0.1 0, 0.0 -3,-0.1 0, 0.0 -0.449 360.0 360.0-107.7 360.0 14.6 16.9 5.2