==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 15-OCT-03 1R6J . COMPND 2 MOLECULE: SYNTENIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR B.S.KANG,Y.DEVEDJIEV,U.DEREWENDA,Z.S.DEREWENDA . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5242.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 65.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 30.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 7.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 11.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 13.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 192 A G > 0 0 89 0, 0.0 3,-2.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-143.2 -7.0 17.4 10.9 2 193 A A T 3 + 0 0 86 1,-0.3 0, 0.0 0, 0.0 0, 0.0 0.727 360.0 58.5 -58.1 -26.6 -7.5 14.6 8.5 3 194 A M T 3 S+ 0 0 94 76,-0.1 -1,-0.3 2,-0.0 3,-0.1 0.330 71.7 121.2 -95.5 11.3 -4.0 15.1 7.1 4 195 A D < - 0 0 106 -3,-2.1 0, 0.0 1,-0.1 0, 0.0 -0.480 69.8-113.0 -61.8 142.0 -2.1 14.5 10.4 5 196 A P - 0 0 80 0, 0.0 2,-0.4 0, 0.0 74,-0.2 -0.237 24.7-141.6 -70.5 165.6 0.2 11.6 9.9 6 197 A R E -A 78 0A 145 72,-2.1 72,-2.6 -3,-0.1 2,-0.5 -0.995 1.2-149.2-127.3 141.0 -0.2 8.3 11.7 7 198 A T E -A 77 0A 93 -2,-0.4 2,-0.6 70,-0.2 70,-0.2 -0.949 14.4-167.9-108.6 122.5 2.5 6.1 13.1 8 199 A I E -A 76 0A 10 68,-2.8 68,-2.7 -2,-0.5 2,-0.6 -0.952 2.6-164.8-116.5 113.1 1.6 2.4 13.0 9 200 A T E +A 75 0A 55 -2,-0.6 2,-0.3 66,-0.3 66,-0.2 -0.895 16.6 175.6-103.0 123.3 3.9 -0.0 15.0 10 201 A M E -A 74 0A 0 64,-2.9 64,-2.7 -2,-0.6 2,-0.4 -0.786 24.0-139.2-123.7 162.9 3.4 -3.7 14.1 11 202 A H E -A 73 0A 101 -2,-0.3 24,-0.2 62,-0.2 62,-0.2 -0.994 27.6-116.7-128.3 123.4 5.1 -6.9 15.0 12 203 A K - 0 0 32 60,-2.7 6,-0.2 -2,-0.4 60,-0.1 -0.307 31.9-127.8 -57.5 140.4 5.8 -9.6 12.5 13 204 A D > - 0 0 85 4,-2.6 3,-2.0 1,-0.1 -1,-0.1 -0.032 39.7 -78.5 -77.5-174.5 3.9 -12.9 13.1 14 205 A S T 3 S+ 0 0 134 1,-0.3 -1,-0.1 2,-0.1 -2,-0.1 0.600 132.0 52.8 -68.6 -11.0 5.5 -16.3 13.3 15 206 A T T 3 S- 0 0 98 2,-0.2 -1,-0.3 0, 0.0 -3,-0.0 0.414 123.7-100.3 -99.6 -3.1 5.8 -16.5 9.5 16 207 A G S < S+ 0 0 35 -3,-2.0 2,-0.4 1,-0.3 -2,-0.1 0.614 82.0 119.3 98.8 14.3 7.6 -13.2 9.2 17 208 A H - 0 0 113 1,-0.1 -4,-2.6 -6,-0.1 18,-0.3 -0.910 49.0-165.8-126.6 142.3 4.7 -10.9 8.2 18 209 A V - 0 0 13 -2,-0.4 18,-2.8 -6,-0.2 19,-0.3 0.695 58.5-105.1 -93.1 -22.4 2.9 -7.9 9.5 19 210 A G + 0 0 8 1,-0.3 12,-2.7 16,-0.2 2,-0.3 0.855 69.1 107.2 106.9 50.1 -0.1 -8.3 7.2 20 211 A F E -B 30 0A 35 10,-0.2 2,-0.3 16,-0.1 -1,-0.3 -0.993 44.5-146.4-152.0 163.3 -0.4 -5.9 4.2 21 212 A I E +B 29 0A 98 8,-2.3 7,-2.9 -2,-0.3 8,-1.6 -0.930 23.5 179.9-118.4 144.5 -0.1 -5.4 0.5 22 213 A F E -B 27 0A 41 -2,-0.3 2,-0.3 5,-0.3 5,-0.2 -0.950 12.2-169.8-143.2 165.6 1.0 -2.2 -1.2 23 214 A K E > S+B 26 0A 153 3,-2.3 3,-1.5 -2,-0.3 -2,-0.0 -0.946 74.6 1.5-159.3 129.9 1.6 -0.8 -4.7 24 215 A N T 3 S- 0 0 131 -2,-0.3 3,-0.1 1,-0.3 -1,-0.0 0.912 131.9 -55.5 53.9 44.4 3.3 2.4 -5.8 25 216 A G T 3 S+ 0 0 11 1,-0.2 22,-2.8 21,-0.1 2,-0.4 0.508 116.4 115.8 75.6 2.9 4.1 3.3 -2.2 26 217 A K E < -BC 23 46A 46 -3,-1.5 -3,-2.3 20,-0.2 20,-0.2 -0.903 69.3-121.3-118.0 129.0 0.3 3.0 -1.3 27 218 A I E +B 22 0A 1 18,-2.7 17,-1.9 -2,-0.4 18,-0.4 -0.506 34.0 171.0 -69.3 131.1 -1.2 0.4 1.0 28 219 A T E + 0 0 70 -7,-2.9 2,-0.3 1,-0.3 -6,-0.2 0.550 56.5 16.2-121.6 -15.9 -3.8 -1.6 -0.8 29 220 A S E -B 21 0A 56 -8,-1.6 -8,-2.3 13,-0.1 2,-0.4 -0.955 54.4-148.7-161.0 147.9 -4.9 -4.5 1.5 30 221 A I E -B 20 0A 48 -2,-0.3 2,-0.3 -10,-0.2 -10,-0.2 -0.940 23.9-126.9-116.9 135.4 -4.8 -5.5 5.1 31 222 A V > - 0 0 77 -12,-2.7 3,-1.7 -2,-0.4 6,-0.5 -0.609 37.9-100.4 -81.5 136.6 -4.6 -9.2 6.2 32 223 A K T 3 S+ 0 0 184 -2,-0.3 3,-0.1 1,-0.3 -1,-0.1 -0.268 99.5 1.4 -64.2 140.3 -7.3 -10.2 8.7 33 224 A D T 3 S+ 0 0 137 1,-0.2 -1,-0.3 2,-0.1 -2,-0.0 0.540 100.5 138.7 64.2 10.2 -6.3 -10.4 12.4 34 225 A S S <> S- 0 0 14 -3,-1.7 4,-2.6 -15,-0.2 5,-0.2 -0.229 72.5-105.7 -77.5 171.3 -2.8 -9.3 11.4 35 226 A S H > S+ 0 0 25 -18,-0.3 4,-1.6 -17,-0.3 6,-0.2 0.898 124.0 54.3 -61.6 -38.6 -0.6 -6.9 13.3 36 227 A A H >>S+ 0 0 0 -18,-2.8 5,-2.6 1,-0.2 4,-0.6 0.931 110.7 45.7 -58.2 -45.8 -1.4 -4.4 10.5 37 228 A A H >45S+ 0 0 42 -6,-0.5 3,-0.7 -19,-0.3 -2,-0.2 0.929 114.3 46.9 -63.6 -46.0 -5.1 -4.9 11.1 38 229 A R H 3<5S+ 0 0 195 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.666 115.1 45.3 -75.4 -17.9 -4.9 -4.7 14.9 39 230 A N H 3<5S- 0 0 82 -4,-1.6 -1,-0.2 -5,-0.2 -2,-0.2 0.379 117.8-106.5-108.4 4.2 -2.7 -1.5 15.0 40 231 A G T <<5 + 0 0 32 -3,-0.7 -3,-0.2 -4,-0.6 2,-0.2 0.789 47.7 173.9 83.5 30.9 -4.7 0.4 12.3 41 232 A L < - 0 0 7 -5,-2.6 2,-0.4 -6,-0.2 -1,-0.2 -0.529 25.0-146.8 -64.2 140.0 -2.7 0.4 9.2 42 233 A L - 0 0 60 -2,-0.2 3,-0.4 4,-0.1 -15,-0.3 -0.913 9.7-131.7-122.2 136.9 -4.9 1.9 6.5 43 234 A T S S+ 0 0 65 -2,-0.4 -15,-0.2 1,-0.2 3,-0.1 -0.249 92.3 43.8 -67.9 166.5 -5.4 1.5 2.8 44 235 A E S S+ 0 0 125 -17,-1.9 37,-0.9 1,-0.3 2,-0.3 0.837 95.7 107.1 60.4 31.8 -5.5 4.6 0.6 45 236 A H E - D 0 80A 29 -18,-0.4 -18,-2.7 -3,-0.4 2,-0.3 -0.982 66.1-126.8-135.4 148.1 -2.5 5.9 2.5 46 237 A N E -CD 26 79A 44 33,-2.9 33,-1.5 -2,-0.3 2,-0.6 -0.715 19.3-117.1-101.8 147.8 1.2 6.2 1.4 47 238 A I E + D 0 78A 6 -22,-2.8 31,-0.2 -2,-0.3 3,-0.1 -0.712 39.1 163.7 -84.0 117.7 4.2 4.8 3.1 48 239 A C E + 0 0 25 29,-2.9 7,-2.1 -2,-0.6 8,-0.8 0.740 61.4 10.2-107.8 -32.6 6.5 7.7 4.1 49 240 A E E -ED 54 77A 72 28,-1.0 28,-2.1 5,-0.2 2,-0.4 -0.986 55.0-161.5-153.5 141.0 9.0 6.2 6.7 50 241 A I E > S-ED 53 76A 1 3,-2.4 3,-2.4 -2,-0.3 26,-0.2 -0.992 79.6 -17.1-130.1 123.2 9.9 2.7 8.0 51 242 A N T 3 S- 0 0 74 24,-2.9 25,-0.1 -2,-0.4 3,-0.1 0.831 129.7 -51.5 52.8 37.5 11.7 2.2 11.3 52 243 A G T 3 S+ 0 0 55 23,-0.4 2,-0.5 1,-0.2 -1,-0.3 0.354 112.4 122.1 83.8 -4.8 12.8 5.8 11.2 53 244 A Q E < -E 50 0A 104 -3,-2.4 -3,-2.4 2,-0.0 2,-0.3 -0.802 65.6-122.8 -96.9 127.8 14.2 5.7 7.7 54 245 A N E +E 49 0A 107 -2,-0.5 -5,-0.2 -5,-0.2 -6,-0.1 -0.497 30.9 175.0 -65.5 124.5 12.8 8.0 5.1 55 246 A V > + 0 0 2 -7,-2.1 3,-1.8 -2,-0.3 -6,-0.2 0.254 30.8 131.2-118.1 11.9 11.4 6.0 2.1 56 247 A I T 3 S+ 0 0 105 -8,-0.8 3,-0.1 1,-0.3 -8,-0.1 -0.402 78.2 17.8 -58.3 136.2 9.9 8.8 0.1 57 248 A G T 3 S+ 0 0 78 1,-0.3 2,-0.3 -2,-0.1 -1,-0.3 0.565 96.7 125.7 76.4 9.7 11.1 8.5 -3.4 58 249 A L < - 0 0 55 -3,-1.8 -1,-0.3 1,-0.1 -3,-0.1 -0.722 63.1-107.1 -99.1 149.8 12.1 4.9 -3.1 59 250 A K >> - 0 0 145 -2,-0.3 4,-2.4 1,-0.1 3,-0.6 -0.317 28.4-110.7 -68.1 157.5 10.9 2.1 -5.5 60 251 A D H 3> S+ 0 0 53 1,-0.2 4,-2.9 2,-0.2 5,-0.2 0.884 120.1 55.8 -54.5 -40.1 8.4 -0.5 -4.3 61 252 A S H 3> S+ 0 0 73 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.846 107.5 49.5 -63.8 -34.1 11.2 -3.1 -4.5 62 253 A Q H <> S+ 0 0 89 -3,-0.6 4,-2.1 2,-0.2 -2,-0.2 0.913 112.1 47.0 -68.0 -44.2 13.3 -1.0 -2.1 63 254 A I H X S+ 0 0 4 -4,-2.4 4,-2.6 2,-0.2 -2,-0.2 0.932 111.7 52.8 -58.3 -47.1 10.4 -0.6 0.3 64 255 A A H X S+ 0 0 31 -4,-2.9 4,-3.0 -5,-0.2 5,-0.2 0.923 108.8 48.2 -55.6 -48.2 9.8 -4.3 0.0 65 256 A D H X S+ 0 0 106 -4,-2.1 4,-2.2 2,-0.2 -1,-0.2 0.876 110.2 51.7 -67.0 -35.9 13.4 -5.2 0.9 66 257 A I H X S+ 0 0 33 -4,-2.1 4,-1.1 2,-0.2 -1,-0.2 0.942 113.2 46.2 -61.1 -45.8 13.4 -2.9 3.9 67 258 A L H >< S+ 0 0 21 -4,-2.6 3,-0.5 1,-0.2 -2,-0.2 0.939 114.3 46.1 -60.6 -49.2 10.2 -4.5 5.1 68 259 A S H 3< S+ 0 0 88 -4,-3.0 -1,-0.2 1,-0.2 -2,-0.2 0.876 115.2 45.8 -65.2 -38.2 11.4 -8.1 4.6 69 260 A T H 3< S+ 0 0 118 -4,-2.2 -1,-0.2 -5,-0.2 -2,-0.2 0.578 91.0 108.6 -84.6 -9.3 14.8 -7.5 6.2 70 261 A S S << S- 0 0 20 -4,-1.1 4,-0.1 -3,-0.5 -3,-0.0 -0.274 74.5-110.2 -59.5 152.0 13.5 -5.7 9.2 71 262 A G - 0 0 55 2,-0.2 -59,-0.1 1,-0.1 -1,-0.1 -0.058 53.4 -76.0 -63.8 178.5 13.4 -7.2 12.6 72 263 A T S S+ 0 0 80 -61,-0.1 -60,-2.7 -60,-0.1 2,-0.5 0.830 115.2 75.0 -54.3 -40.3 10.1 -8.2 14.1 73 264 A V E -A 11 0A 67 -62,-0.2 2,-0.5 -64,-0.1 -62,-0.2 -0.669 60.9-179.1 -82.8 126.3 9.1 -4.6 15.0 74 265 A V E -A 10 0A 0 -64,-2.7 -64,-2.9 -2,-0.5 2,-0.5 -0.977 4.4-172.3-127.2 116.9 8.0 -2.6 11.9 75 266 A T E -A 9 0A 33 -2,-0.5 -24,-2.9 -66,-0.2 2,-0.4 -0.949 6.6-173.7-114.9 123.9 6.9 1.0 12.4 76 267 A I E -AD 8 50A 0 -68,-2.7 -68,-2.8 -2,-0.5 2,-0.5 -0.955 19.0-147.4-122.7 132.2 5.5 2.9 9.5 77 268 A T E -AD 7 49A 25 -28,-2.1 -29,-2.9 -2,-0.4 -28,-1.0 -0.867 28.0-173.4 -89.7 126.2 4.5 6.6 9.1 78 269 A I E -AD 6 47A 1 -72,-2.6 -72,-2.1 -2,-0.5 -31,-0.2 -0.883 12.1-175.3-124.1 153.4 1.5 6.9 6.7 79 270 A M E - D 0 46A 56 -33,-1.5 -33,-2.9 -2,-0.3 -76,-0.1 -0.995 35.1-100.1-139.9 146.4 -0.3 9.8 5.2 80 271 A P E - D 0 45A 25 0, 0.0 2,-0.3 0, 0.0 -35,-0.2 -0.322 44.6-166.9 -59.3 152.7 -3.5 10.1 3.0 81 272 A A 0 0 17 -37,-0.9 -55,-0.0 1,-0.1 0, 0.0 -0.980 360.0 360.0-147.9 155.2 -2.6 10.5 -0.7 82 273 A F 0 0 233 -2,-0.3 -1,-0.1 -37,-0.0 -37,-0.0 0.433 360.0 360.0-131.9 360.0 -4.5 11.5 -3.8