==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 12-SEP-07 2R9I . COMPND 2 MOLECULE: PUTATIVE PHAGE CAPSID PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM DIPHTHERIAE NCTC 13129 . AUTHOR R.WU,J.ABDULLAH,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL G . 72 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5921.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 87.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 55 76.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A X 0 0 136 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 156.7 20.3 39.4 -0.6 2 2 A N >> - 0 0 85 1,-0.0 4,-2.1 4,-0.0 3,-0.8 -0.348 360.0 -89.0 -91.2 177.5 19.4 37.4 2.6 3 3 A L H 3> S+ 0 0 59 1,-0.3 4,-2.1 2,-0.2 5,-0.2 0.868 124.6 53.3 -57.9 -43.9 20.5 38.0 6.1 4 4 A K H 3> S+ 0 0 176 1,-0.2 4,-1.6 2,-0.2 -1,-0.3 0.846 112.2 47.2 -61.6 -33.9 23.8 36.0 6.0 5 5 A D H <> S+ 0 0 80 -3,-0.8 4,-2.8 2,-0.2 -1,-0.2 0.842 107.9 55.1 -74.0 -39.7 24.8 38.0 2.9 6 6 A L H X S+ 0 0 12 -4,-2.1 4,-2.5 2,-0.2 -2,-0.2 0.851 108.4 49.1 -61.0 -38.3 23.9 41.3 4.5 7 7 A L H X S+ 0 0 66 -4,-2.1 4,-2.2 2,-0.2 -2,-0.2 0.906 112.4 46.4 -71.8 -41.3 26.2 40.5 7.4 8 8 A A H X S+ 0 0 48 -4,-1.6 4,-2.6 2,-0.2 -2,-0.2 0.916 113.4 51.1 -62.2 -42.8 29.0 39.6 5.1 9 9 A H H X S+ 0 0 65 -4,-2.8 4,-2.2 2,-0.2 -2,-0.2 0.918 109.2 49.7 -60.7 -48.2 28.4 42.8 3.1 10 10 A R H X S+ 0 0 74 -4,-2.5 4,-1.9 1,-0.2 -1,-0.2 0.925 111.2 48.8 -55.9 -47.7 28.4 44.9 6.3 11 11 A E H X S+ 0 0 137 -4,-2.2 4,-2.7 1,-0.2 -2,-0.2 0.885 109.2 53.2 -66.0 -37.3 31.7 43.4 7.4 12 12 A N H X S+ 0 0 98 -4,-2.6 4,-2.8 1,-0.2 -1,-0.2 0.889 109.1 49.9 -60.1 -38.1 33.2 44.0 3.8 13 13 A L H X S+ 0 0 27 -4,-2.2 4,-1.9 2,-0.2 -1,-0.2 0.866 111.7 47.2 -68.4 -36.4 32.2 47.6 4.0 14 14 A X H X S+ 0 0 62 -4,-1.9 4,-1.6 2,-0.2 -2,-0.2 0.909 111.8 51.0 -72.7 -42.5 33.8 47.9 7.4 15 15 A D H X S+ 0 0 73 -4,-2.7 4,-2.3 1,-0.2 5,-0.2 0.946 112.7 45.8 -56.5 -48.2 36.9 46.2 6.2 16 16 A S H X S+ 0 0 48 -4,-2.8 4,-2.1 1,-0.2 -2,-0.2 0.817 107.7 56.1 -73.4 -28.4 37.2 48.5 3.2 17 17 A A H X S+ 0 0 9 -4,-1.9 4,-1.9 2,-0.2 -1,-0.2 0.825 110.6 48.1 -64.2 -34.7 36.5 51.6 5.3 18 18 A K H X S+ 0 0 134 -4,-1.6 4,-2.4 2,-0.2 -2,-0.2 0.923 109.4 48.4 -74.6 -44.3 39.5 50.5 7.4 19 19 A R H X S+ 0 0 190 -4,-2.3 4,-1.5 1,-0.2 -2,-0.2 0.922 113.6 53.0 -58.9 -37.2 41.9 49.8 4.4 20 20 A A H X S+ 0 0 29 -4,-2.1 4,-0.6 -5,-0.2 -2,-0.2 0.907 110.9 41.8 -66.4 -42.2 40.8 53.2 3.2 21 21 A R H < S+ 0 0 158 -4,-1.9 3,-0.4 1,-0.2 -1,-0.2 0.793 110.5 57.8 -78.5 -26.5 41.6 55.1 6.5 22 22 A S H < S+ 0 0 89 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.844 99.5 60.2 -62.5 -35.3 44.8 53.2 6.9 23 23 A A H < S+ 0 0 66 -4,-1.5 2,-2.0 -5,-0.2 -1,-0.2 0.758 84.2 86.2 -68.3 -24.6 45.9 54.5 3.5 24 24 A I < + 0 0 27 -4,-0.6 2,-0.2 -3,-0.4 -1,-0.2 -0.524 60.9 165.4 -78.6 75.2 45.6 58.1 4.8 25 25 A T > - 0 0 70 -2,-2.0 3,-2.1 1,-0.1 -2,-0.0 -0.639 50.1-113.4 -86.8 154.1 49.0 58.5 6.3 26 26 A D T 3 S+ 0 0 171 1,-0.3 -1,-0.1 -2,-0.2 -2,-0.1 0.314 113.1 69.5 -78.7 11.4 50.3 61.9 7.2 27 27 A D T 3 S+ 0 0 129 2,-0.1 -1,-0.3 3,-0.0 2,-0.2 0.201 81.5 101.7-102.8 10.8 52.9 61.7 4.5 28 28 A X S < S- 0 0 55 -3,-2.1 -4,-0.0 1,-0.1 -5,-0.0 -0.637 86.5 -92.5 -90.8 154.0 50.1 61.9 1.9 29 29 A D > - 0 0 91 -2,-0.2 4,-2.9 1,-0.1 3,-0.4 -0.461 30.4-123.4 -68.3 132.0 49.3 65.0 -0.1 30 30 A P H > S+ 0 0 101 0, 0.0 4,-2.6 0, 0.0 5,-0.2 0.786 110.5 52.7 -38.3 -44.4 46.6 67.3 1.5 31 31 A A H > S+ 0 0 68 2,-0.2 4,-2.0 1,-0.2 5,-0.1 0.951 114.7 40.2 -63.8 -49.4 44.5 67.2 -1.7 32 32 A D H > S+ 0 0 99 -3,-0.4 4,-3.4 2,-0.2 -1,-0.2 0.857 113.7 55.1 -64.6 -39.1 44.5 63.4 -1.8 33 33 A A H X S+ 0 0 23 -4,-2.9 4,-1.9 2,-0.2 -2,-0.2 0.922 108.3 48.1 -63.4 -43.7 44.0 63.2 1.9 34 34 A A H X S+ 0 0 60 -4,-2.6 4,-1.4 -5,-0.2 -2,-0.2 0.894 114.3 46.4 -62.4 -41.2 40.9 65.4 1.7 35 35 A Q H >X S+ 0 0 117 -4,-2.0 4,-2.3 1,-0.2 3,-0.5 0.958 109.9 53.7 -65.0 -48.9 39.5 63.2 -1.1 36 36 A A H 3X S+ 0 0 21 -4,-3.4 4,-2.0 1,-0.3 -1,-0.2 0.851 107.1 51.5 -53.7 -39.5 40.4 60.1 0.7 37 37 A V H 3X S+ 0 0 58 -4,-1.9 4,-2.3 2,-0.2 -1,-0.3 0.839 106.7 54.6 -66.0 -35.2 38.4 61.3 3.8 38 38 A E H X S+ 0 0 42 -4,-1.9 4,-2.1 2,-0.2 3,-0.7 0.943 112.8 51.2 -65.7 -46.5 31.7 54.0 2.8 44 44 A I H 3X S+ 0 0 63 -4,-3.2 4,-2.6 1,-0.3 5,-0.2 0.902 104.4 57.5 -60.6 -36.4 30.7 54.6 6.4 45 45 A S H 3X S+ 0 0 61 -4,-1.6 4,-1.6 -5,-0.3 -1,-0.3 0.873 108.3 47.6 -58.0 -33.9 27.4 56.1 5.2 46 46 A E H X S+ 0 0 81 -4,-2.8 4,-3.1 2,-0.2 3,-1.8 0.925 111.6 51.5 -72.2 -50.5 7.9 40.8 15.4 64 64 A T H 3X S+ 0 0 61 -4,-2.4 4,-2.5 1,-0.3 -1,-0.2 0.868 108.4 53.7 -56.9 -37.5 6.1 38.3 13.2 65 65 A Q H 3X S+ 0 0 119 -4,-1.6 4,-0.6 2,-0.2 -1,-0.3 0.587 112.8 43.9 -75.9 -10.3 7.0 35.6 15.6 66 66 A K H <4 S+ 0 0 134 -3,-1.8 4,-0.3 2,-0.2 -2,-0.2 0.810 108.8 53.2-107.8 -43.1 5.5 37.6 18.4 67 67 A L H >< S+ 0 0 102 -4,-3.1 3,-2.5 1,-0.2 4,-0.4 0.965 108.8 53.0 -44.4 -56.0 2.4 38.7 16.7 68 68 A K H >< S+ 0 0 133 -4,-2.5 3,-1.6 1,-0.3 -1,-0.2 0.939 109.1 49.8 -49.7 -49.7 1.8 35.1 15.9 69 69 A G T 3< S+ 0 0 66 -4,-0.6 -1,-0.3 1,-0.3 -2,-0.2 0.433 107.6 53.1 -75.1 4.7 2.1 34.3 19.6 70 70 A L T < S+ 0 0 126 -3,-2.5 -1,-0.3 -4,-0.3 2,-0.2 0.262 81.8 121.4-118.0 6.5 -0.2 37.0 20.7 71 71 A T < 0 0 104 -3,-1.6 -3,-0.0 -4,-0.4 -4,-0.0 -0.533 360.0 360.0 -80.2 140.2 -3.0 35.9 18.5 72 72 A I 0 0 209 -2,-0.2 0, 0.0 0, 0.0 0, 0.0 0.171 360.0 360.0 118.5 360.0 -6.4 34.9 19.9