==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE(ENDORIBONUCLEASE) 07-JUN-93 1RGA . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR I.ZEGERS,L.WYNS . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5472.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 58.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 26.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 150 0, 0.0 2,-0.4 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 154.5 5.7 55.1 5.4 2 2 A a - 0 0 44 1,-0.1 10,-0.2 10,-0.1 3,-0.2 -0.748 360.0-153.5 -90.3 135.1 7.6 52.1 6.9 3 3 A D S S+ 0 0 85 8,-1.0 2,-0.4 -2,-0.4 9,-0.2 0.825 93.3 17.5 -70.9 -31.2 6.3 48.6 6.3 4 4 A Y E S-A 11 0A 60 7,-2.2 7,-2.8 -3,-0.1 2,-0.6 -0.996 71.5-161.7-141.2 130.9 8.0 47.6 9.5 5 5 A T E -A 10 0A 46 -2,-0.4 99,-2.4 5,-0.2 2,-0.8 -0.969 5.5-174.1-117.0 121.5 9.2 50.0 12.2 6 6 A b E > -A 9 0A 0 3,-3.2 3,-2.8 -2,-0.6 2,-0.6 -0.843 66.8 -59.1-116.0 95.0 11.8 48.6 14.5 7 7 A G T 3 S- 0 0 42 -2,-0.8 97,-0.1 1,-0.3 84,-0.0 -0.553 121.8 -20.7 71.1-122.3 12.4 51.2 17.2 8 8 A S T 3 S+ 0 0 120 -2,-0.6 2,-0.4 -3,-0.1 -1,-0.3 0.441 117.8 104.5 -98.8 -4.7 13.7 54.1 15.0 9 9 A N E < -A 6 0A 48 -3,-2.8 -3,-3.2 -7,-0.0 2,-0.5 -0.677 56.8-157.2 -85.4 134.2 14.6 51.9 12.1 10 10 A a E -A 5 0A 69 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.913 11.7-177.4-114.4 129.0 12.3 51.9 9.1 11 11 A Y E -A 4 0A 5 -7,-2.8 -7,-2.2 -2,-0.5 -8,-1.0 -0.981 14.4-148.5-126.9 141.3 12.1 49.1 6.7 12 12 A S > - 0 0 35 -2,-0.4 4,-2.1 -9,-0.2 5,-0.2 -0.454 37.8-103.1 -98.5 169.1 10.2 48.5 3.5 13 13 A S H > S+ 0 0 59 1,-0.2 4,-3.3 2,-0.2 5,-0.2 0.918 123.4 57.8 -54.0 -36.7 9.0 45.1 2.3 14 14 A S H > S+ 0 0 75 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.942 103.1 51.9 -67.6 -40.4 11.8 45.2 -0.2 15 15 A D H > S+ 0 0 59 2,-0.2 4,-2.3 1,-0.2 5,-0.2 0.922 112.8 45.9 -59.3 -43.6 14.4 45.6 2.6 16 16 A V H X S+ 0 0 2 -4,-2.1 4,-3.5 2,-0.2 5,-0.3 0.962 111.8 50.9 -63.2 -51.8 12.9 42.6 4.4 17 17 A S H X S+ 0 0 70 -4,-3.3 4,-2.5 1,-0.2 -2,-0.2 0.906 111.2 49.0 -53.4 -45.4 12.7 40.5 1.1 18 18 A T H X S+ 0 0 80 -4,-2.5 4,-1.6 -5,-0.2 -1,-0.2 0.916 114.5 43.7 -63.5 -48.4 16.4 41.2 0.4 19 19 A A H X S+ 0 0 7 -4,-2.3 4,-2.4 2,-0.2 5,-0.3 0.930 114.2 50.8 -64.1 -47.2 17.5 40.3 4.0 20 20 A Q H X S+ 0 0 15 -4,-3.5 4,-3.3 1,-0.2 5,-0.2 0.937 106.9 53.9 -57.5 -42.0 15.4 37.2 4.0 21 21 A A H X S+ 0 0 57 -4,-2.5 4,-2.2 -5,-0.3 -1,-0.2 0.916 110.5 47.0 -60.6 -41.7 16.7 36.0 0.7 22 22 A A H X S+ 0 0 28 -4,-1.6 4,-2.0 2,-0.2 -1,-0.2 0.900 114.2 46.5 -66.7 -44.3 20.2 36.2 1.9 23 23 A G H X S+ 0 0 0 -4,-2.4 4,-2.3 2,-0.2 -2,-0.2 0.908 112.3 50.4 -62.6 -42.2 19.5 34.5 5.2 24 24 A Y H X S+ 0 0 43 -4,-3.3 4,-2.8 -5,-0.3 -2,-0.2 0.931 106.9 53.1 -67.0 -38.9 17.6 31.7 3.5 25 25 A K H X S+ 0 0 125 -4,-2.2 4,-2.1 -5,-0.2 -1,-0.2 0.931 111.0 47.6 -64.1 -47.8 20.3 30.9 0.9 26 26 A L H X>S+ 0 0 29 -4,-2.0 5,-2.7 1,-0.2 4,-0.8 0.878 111.4 51.4 -59.6 -36.1 22.8 30.5 3.7 27 27 A H H ><5S+ 0 0 39 -4,-2.3 3,-1.0 1,-0.2 -2,-0.2 0.931 109.9 48.9 -62.5 -47.4 20.4 28.3 5.6 28 28 A E H 3<5S+ 0 0 101 -4,-2.8 -1,-0.2 1,-0.3 -2,-0.2 0.801 113.3 47.6 -60.6 -35.1 19.9 26.1 2.6 29 29 A D H 3<5S- 0 0 82 -4,-2.1 -1,-0.3 -5,-0.2 -2,-0.2 0.506 110.2-122.6 -83.3 -7.6 23.7 25.9 2.1 30 30 A G T <<5 + 0 0 70 -3,-1.0 2,-0.3 -4,-0.8 -3,-0.2 0.834 69.1 128.8 68.0 36.7 24.3 25.1 5.7 31 31 A E < - 0 0 112 -5,-2.7 2,-0.3 -6,-0.1 -1,-0.3 -0.797 38.5-163.7-115.9 165.2 26.6 28.0 6.1 32 32 A T - 0 0 76 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.934 5.3-151.8-145.9 168.2 26.7 30.8 8.6 33 33 A V B > +B 38 0B 38 5,-2.6 5,-3.0 -2,-0.3 37,-0.2 -0.963 54.1 30.0-139.9 153.3 28.2 34.3 9.1 34 34 A G T > 5S- 0 0 28 -2,-0.3 3,-1.5 35,-0.3 38,-0.1 0.185 90.9 -80.0 88.3 156.6 29.2 36.3 12.1 35 35 A S T 3 5S+ 0 0 118 1,-0.3 -1,-0.2 36,-0.1 37,-0.1 0.667 131.5 55.8 -72.6 -12.1 30.4 35.2 15.5 36 36 A N T 3 5S- 0 0 104 -3,-0.1 -1,-0.3 4,-0.0 -2,-0.1 0.210 111.7-123.6 -99.4 10.8 26.8 34.6 16.5 37 37 A S T < 5 - 0 0 55 -3,-1.5 -3,-0.2 1,-0.2 -2,-0.1 0.947 36.6-132.8 47.1 73.9 26.4 32.2 13.5 38 38 A Y B + 0 0 33 1,-0.1 3,-1.2 2,-0.1 -2,-0.0 0.900 46.3 159.1 67.5 42.8 10.2 31.8 19.8 45 45 A Y T 3 S+ 0 0 193 1,-0.3 -1,-0.1 2,-0.1 54,-0.0 0.855 72.0 60.8 -62.6 -31.4 10.7 32.0 23.6 46 46 A E T 3 S- 0 0 57 1,-0.1 -1,-0.3 55,-0.0 -2,-0.1 0.732 106.3-130.3 -68.0 -24.3 8.7 35.3 23.4 47 47 A G < - 0 0 56 -3,-1.2 -2,-0.1 1,-0.1 -1,-0.1 0.863 33.6-174.0 75.7 37.0 5.6 33.5 22.0 48 48 A F - 0 0 33 1,-0.1 2,-1.2 53,-0.0 -1,-0.1 -0.401 33.3-114.7 -63.0 151.1 4.9 35.7 19.0 49 49 A D + 0 0 143 2,-0.0 -1,-0.1 38,-0.0 2,-0.0 -0.489 46.5 175.8 -86.6 58.1 1.7 35.0 17.1 50 50 A F - 0 0 26 -2,-1.2 38,-0.1 1,-0.1 37,-0.1 -0.502 26.6-150.6 -66.5 141.4 3.4 33.9 13.9 51 51 A S S S+ 0 0 117 36,-0.3 2,-0.3 2,-0.1 -1,-0.1 0.293 75.4 68.9 -95.4 5.5 1.1 32.7 11.2 52 52 A V S S- 0 0 25 33,-0.1 2,-0.1 35,-0.1 -2,-0.0 -0.861 89.7 -97.7-118.2 156.8 3.6 30.3 9.5 53 53 A S - 0 0 76 -2,-0.3 29,-0.2 1,-0.1 30,-0.2 -0.355 45.4 -81.0 -83.1 161.3 4.9 27.2 11.1 54 54 A S S S+ 0 0 71 27,-0.1 2,-0.1 -2,-0.1 -1,-0.1 -0.208 82.0 85.7 -71.9 162.1 8.1 26.5 12.9 55 55 A P - 0 0 41 0, 0.0 27,-1.0 0, 0.0 2,-0.3 0.485 66.2-169.6 -73.4 154.5 11.0 25.9 12.7 56 56 A Y E -CD 42 81C 22 -14,-0.6 -14,-2.6 25,-0.2 2,-0.3 -0.851 10.8-160.0-115.0 153.6 12.0 29.5 12.6 57 57 A Y E -CD 41 80C 35 23,-2.9 23,-2.3 -2,-0.3 2,-0.4 -0.972 9.1-142.8-131.6 145.1 15.4 31.1 11.8 58 58 A E E +CD 40 79C 16 -18,-2.9 -18,-1.5 -2,-0.3 21,-0.2 -0.839 18.7 174.9-115.8 144.7 16.6 34.6 12.6 59 59 A W E - D 0 78C 2 19,-2.2 19,-3.6 -2,-0.4 -36,-0.1 -0.996 34.9-107.0-143.7 133.7 18.8 36.7 10.4 60 60 A P E - D 0 77C 1 0, 0.0 8,-0.5 0, 0.0 2,-0.4 -0.372 23.4-160.1 -69.0 142.6 19.8 40.3 11.0 61 61 A I E - D 0 76C 7 15,-1.6 15,-0.5 12,-0.3 2,-0.4 -0.983 18.7-143.2-117.9 134.3 18.3 43.1 8.9 62 62 A L > - 0 0 33 4,-0.5 3,-1.6 -2,-0.4 12,-0.1 -0.864 17.2-140.9-105.5 142.0 20.4 46.2 9.0 63 63 A S T 3 S+ 0 0 82 -2,-0.4 -1,-0.1 1,-0.3 -53,-0.1 0.670 101.2 69.2 -71.0 -16.5 19.3 49.8 9.0 64 64 A S T 3 S- 0 0 74 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.660 108.3-123.4 -71.0 -13.7 22.3 50.7 6.6 65 65 A G S < S+ 0 0 52 -3,-1.6 2,-0.2 1,-0.3 -2,-0.1 0.432 72.9 125.0 87.0 -1.7 20.4 48.7 3.9 66 66 A D - 0 0 114 1,-0.1 -4,-0.5 -5,-0.0 -1,-0.3 -0.537 69.7-107.5 -83.1 158.8 23.4 46.4 3.4 67 67 A V - 0 0 63 -2,-0.2 -6,-0.1 -6,-0.1 -1,-0.1 -0.678 45.2 -96.9 -85.0 139.2 23.0 42.6 3.7 68 68 A Y + 0 0 9 -8,-0.5 -1,-0.1 -2,-0.3 3,-0.1 -0.298 48.8 166.5 -60.0 131.6 24.5 41.3 7.0 69 69 A S - 0 0 104 1,-0.6 -35,-0.3 -2,-0.1 2,-0.2 0.245 59.7 -64.0-132.9 12.7 28.0 39.9 6.3 70 70 A G S S+ 0 0 27 -37,-0.2 -1,-0.6 1,-0.2 2,-0.1 -0.548 92.8 76.4 121.3 171.1 29.4 39.5 9.9 71 71 A G S S- 0 0 56 -2,-0.2 -1,-0.2 -3,-0.1 -36,-0.1 -0.462 97.4 -2.1 84.2-165.6 30.2 41.9 12.6 72 72 A S - 0 0 104 1,-0.2 -2,-0.1 -2,-0.1 -38,-0.0 -0.390 56.9-160.3 -61.2 127.0 27.6 43.5 14.8 73 73 A P - 0 0 24 0, 0.0 3,-0.4 0, 0.0 -12,-0.3 0.478 27.8-143.9 -84.3 -3.6 24.1 42.4 13.7 74 74 A G - 0 0 40 1,-0.2 -12,-0.1 -14,-0.1 17,-0.0 -0.258 38.8 -62.6 71.9-166.7 22.3 45.4 15.4 75 75 A A S S+ 0 0 20 -69,-0.1 17,-2.4 -14,-0.1 2,-0.3 0.569 102.8 85.4 -97.3 -11.2 19.0 44.9 17.1 76 76 A D E +DE 61 91C 2 -15,-0.5 -15,-1.6 -3,-0.4 2,-0.3 -0.741 47.1 177.2-103.0 151.3 16.8 43.9 14.2 77 77 A R E -DE 60 90C 7 13,-3.2 13,-2.1 -2,-0.3 2,-0.4 -0.966 25.9-137.8-145.6 154.0 16.0 40.6 12.7 78 78 A V E -DE 59 89C 0 -19,-3.6 -19,-2.2 -2,-0.3 2,-0.5 -0.858 23.4-151.6-102.9 146.9 13.9 38.9 10.0 79 79 A V E +DE 58 88C 0 9,-2.7 8,-3.2 -2,-0.4 9,-1.6 -0.990 22.1 169.4-121.8 118.2 12.4 35.6 11.1 80 80 A F E -DE 57 86C 0 -23,-2.3 -23,-2.9 -2,-0.5 6,-0.2 -0.847 21.0-135.5-124.6 164.6 11.8 33.1 8.3 81 81 A N E > -D 56 0C 2 4,-1.8 3,-2.1 -2,-0.3 -25,-0.2 -0.478 40.8 -80.7-109.4-167.1 10.8 29.4 8.4 82 82 A E T 3 S+ 0 0 67 -27,-1.0 -26,-0.1 1,-0.3 -28,-0.1 0.773 126.9 54.7 -61.1 -27.8 11.9 26.3 6.5 83 83 A N T 3 S- 0 0 106 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.231 117.8-109.0 -92.9 12.2 9.8 27.2 3.5 84 84 A N S < S+ 0 0 61 -3,-2.1 2,-0.4 1,-0.3 -2,-0.1 0.876 70.9 148.0 62.6 33.5 11.3 30.6 3.2 85 85 A Q - 0 0 81 -32,-0.1 -4,-1.8 -4,-0.0 2,-0.4 -0.866 53.5-115.7 -97.0 137.6 8.0 32.1 4.4 86 86 A L E -E 80 0C 52 -2,-0.4 -6,-0.3 -6,-0.2 3,-0.1 -0.591 30.0-177.8 -74.9 131.0 8.4 35.3 6.4 87 87 A A E - 0 0 14 -8,-3.2 -36,-0.3 1,-0.4 2,-0.3 0.821 56.2 -69.1 -90.9 -44.0 7.3 34.9 10.1 88 88 A G E -E 79 0C 7 -9,-1.6 -9,-2.7 -38,-0.1 2,-0.4 -0.965 39.3 -93.8 171.7-176.3 7.9 38.5 11.2 89 89 A V E +E 78 0C 2 -2,-0.3 14,-2.9 14,-0.3 2,-0.3 -0.985 44.0 173.3-128.2 125.4 10.4 41.2 11.9 90 90 A I E -EF 77 102C 0 -13,-2.1 -13,-3.2 -2,-0.4 2,-0.3 -0.829 11.8-162.4-135.3 168.0 11.5 41.7 15.5 91 91 A T E -EF 76 101C 2 10,-3.0 10,-2.5 -2,-0.3 -15,-0.2 -0.992 31.1-136.4-150.5 158.3 13.9 43.7 17.4 92 92 A H S > S+ 0 0 37 -17,-2.4 3,-1.8 -2,-0.3 2,-0.2 0.596 75.7 110.1 -83.8 -13.8 15.7 43.9 20.7 93 93 A T T 3 S+ 0 0 61 1,-0.3 -86,-0.2 -18,-0.2 8,-0.2 -0.582 89.4 10.8 -66.2 132.0 15.0 47.7 20.7 94 94 A G T 3 S+ 0 0 79 1,-0.3 2,-0.3 -2,-0.2 -1,-0.3 0.588 109.8 104.2 78.0 13.1 12.5 48.5 23.4 95 95 A A S < S- 0 0 19 -3,-1.8 -1,-0.3 4,-0.2 2,-0.1 -0.961 78.8-106.9-121.6 141.6 12.8 44.9 24.9 96 96 A S S > S- 0 0 94 -2,-0.3 3,-1.9 4,-0.1 -3,-0.0 -0.468 74.8 -31.3 -76.6 150.8 14.8 44.3 28.1 97 97 A G T 3 S- 0 0 63 1,-0.2 -2,-0.2 -2,-0.1 0, 0.0 -0.265 126.1 -21.7 53.0-132.1 18.1 42.6 27.8 98 98 A N T 3 S+ 0 0 146 2,-0.1 -1,-0.2 0, 0.0 -2,-0.1 0.058 106.3 116.4 -97.9 19.1 18.3 40.1 24.9 99 99 A N < - 0 0 81 -3,-1.9 2,-0.3 -7,-0.1 -4,-0.2 -0.369 56.3-133.2 -75.9 169.6 14.6 39.7 24.6 100 100 A F - 0 0 17 -6,-0.1 2,-0.3 -10,-0.0 -8,-0.2 -0.905 15.6-166.6-125.5 160.1 12.7 40.8 21.5 101 101 A V E -F 91 0C 55 -10,-2.5 -10,-3.0 -2,-0.3 2,-0.2 -0.904 38.7 -94.8-131.8 160.4 9.5 42.7 20.6 102 102 A E E -F 90 0C 73 -2,-0.3 -12,-0.3 -12,-0.2 2,-0.2 -0.554 32.5-116.6 -81.7 152.7 7.9 42.8 17.2 103 103 A b 0 0 10 -14,-2.9 -14,-0.3 -2,-0.2 -97,-0.2 -0.573 360.0 360.0 -74.3 145.9 8.6 45.5 14.7 104 104 A T 0 0 137 -99,-2.4 -98,-0.1 -2,-0.2 -1,-0.1 0.586 360.0 360.0-101.3 360.0 5.3 47.4 14.1