==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 12-NOV-03 1RGO . COMPND 2 MOLECULE: BUTYRATE RESPONSE FACTOR 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR B.P.HUDSON,M.A.MARTINEZ-YAMOUT,H.J.DYSON,P.E.WRIGHT . 70 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6241.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 47.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 5.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 17.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 151 A S > 0 0 120 0, 0.0 3,-1.5 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 140.6 8.9 8.8 8.0 2 152 A T T 3 + 0 0 105 1,-0.3 35,-0.1 3,-0.0 0, 0.0 0.728 360.0 66.2 -68.8 -17.2 9.0 5.6 5.8 3 153 A R T > S+ 0 0 122 33,-0.1 3,-2.1 2,-0.1 4,-0.4 0.385 71.4 139.9 -82.1 5.9 5.2 5.3 6.3 4 154 A Y T < S- 0 0 81 -3,-1.5 30,-0.3 1,-0.3 22,-0.2 -0.292 84.4 -15.5 -57.9 122.3 4.8 8.6 4.3 5 155 A K T 3 S+ 0 0 19 20,-3.2 29,-1.2 1,-0.1 -1,-0.3 0.786 99.0 124.5 52.8 31.8 1.6 8.2 2.0 6 156 A T S < S+ 0 0 28 -3,-2.1 2,-0.3 19,-0.3 -2,-0.1 0.564 70.9 47.0 -90.0 -8.0 1.7 4.4 2.5 7 157 A E S S- 0 0 32 -4,-0.4 20,-2.7 18,-0.2 -2,-0.1 -0.959 97.3 -97.6-132.9 149.1 -2.0 4.6 3.7 8 158 A L B -a 27 0A 51 -2,-0.3 2,-1.1 18,-0.2 20,-0.2 -0.383 34.7-117.3 -62.1 142.0 -5.1 6.4 2.3 9 159 A C > - 0 0 4 18,-2.9 4,-2.3 1,-0.2 5,-0.2 -0.654 32.3-167.1 -75.6 98.7 -6.0 9.8 3.8 10 160 A R H > S+ 0 0 135 -2,-1.1 4,-2.2 1,-0.2 5,-0.2 0.926 81.7 52.8 -64.3 -43.2 -9.4 8.7 5.2 11 161 A P H > S+ 0 0 72 0, 0.0 4,-2.5 0, 0.0 6,-0.6 0.911 112.7 46.5 -60.9 -37.0 -10.7 12.3 6.0 12 162 A F H > S+ 0 0 64 1,-0.2 4,-1.9 2,-0.2 -2,-0.2 0.924 113.1 48.3 -69.9 -42.1 -9.9 13.3 2.3 13 163 A E H < S+ 0 0 94 -4,-2.3 -1,-0.2 1,-0.2 -3,-0.2 0.819 118.0 43.1 -65.8 -29.0 -11.6 10.1 0.9 14 164 A E H < S+ 0 0 154 -4,-2.2 -2,-0.2 -5,-0.2 -1,-0.2 0.893 133.8 13.1 -84.9 -44.3 -14.7 10.8 3.1 15 165 A S H < S- 0 0 96 -4,-2.5 -3,-0.2 2,-0.3 -2,-0.2 0.491 92.8-121.9-118.1 -5.7 -15.2 14.6 2.7 16 166 A G S < S+ 0 0 54 -4,-1.9 2,-0.3 -5,-0.5 -4,-0.2 0.628 83.8 89.3 77.2 9.5 -12.9 15.5 -0.3 17 167 A T - 0 0 97 -6,-0.6 2,-0.3 -5,-0.0 -2,-0.3 -0.975 51.9-170.3-137.6 153.0 -10.9 18.0 1.9 18 168 A C > - 0 0 23 -2,-0.3 3,-1.1 -3,-0.1 6,-0.1 -0.959 20.1-149.0-146.3 125.7 -7.9 17.9 4.2 19 169 A K T 3 S+ 0 0 206 -2,-0.3 -1,-0.1 1,-0.2 0, 0.0 0.675 100.2 61.4 -69.2 -13.9 -6.6 20.6 6.6 20 170 A Y T > S+ 0 0 149 1,-0.2 3,-1.9 2,-0.1 -1,-0.2 0.737 83.2 179.3 -86.7 -19.2 -3.0 19.4 6.0 21 171 A G G X - 0 0 30 -3,-1.1 3,-1.7 1,-0.3 -1,-0.2 -0.283 67.4 -7.4 59.6-138.9 -3.2 20.2 2.2 22 172 A E G 3 S+ 0 0 171 1,-0.3 -1,-0.3 3,-0.0 -2,-0.1 0.600 136.2 61.5 -69.7 -7.0 0.1 19.3 0.3 23 173 A K G < S+ 0 0 158 -3,-1.9 -1,-0.3 2,-0.0 -2,-0.2 0.401 72.3 126.5 -98.7 3.4 1.8 18.7 3.7 24 174 A C < - 0 0 4 -3,-1.7 4,-0.1 1,-0.2 -15,-0.1 -0.402 55.9-147.7 -62.6 130.3 -0.6 15.7 4.6 25 175 A Q S S+ 0 0 100 -2,-0.1 -20,-3.2 -21,-0.1 -19,-0.3 0.354 75.7 76.4 -82.0 7.9 1.6 12.6 5.4 26 176 A F S S- 0 0 89 -22,-0.2 2,-0.6 -21,-0.2 -18,-0.2 -0.768 94.4 -90.7-120.3 161.9 -1.2 10.3 4.0 27 177 A A B +a 8 0A 0 -20,-2.7 -18,-2.9 -2,-0.2 3,-0.1 -0.607 30.9 179.8 -78.5 118.3 -2.2 9.5 0.3 28 178 A H S S+ 0 0 27 -2,-0.6 2,-0.3 1,-0.2 -1,-0.2 0.788 80.9 27.2 -81.6 -25.7 -4.9 11.9 -1.1 29 179 A G S > S- 0 0 26 1,-0.1 3,-2.1 -16,-0.0 4,-0.4 -0.977 78.8-125.2-131.0 151.1 -4.7 9.8 -4.4 30 180 A F G > S+ 0 0 136 -2,-0.3 3,-1.1 1,-0.3 -1,-0.1 0.782 109.8 72.4 -64.5 -20.5 -3.7 6.1 -5.1 31 181 A H G 3 S+ 0 0 192 1,-0.2 -1,-0.3 -3,-0.0 -4,-0.0 0.717 97.8 49.2 -63.3 -17.9 -1.2 7.6 -7.6 32 182 A E G < S+ 0 0 65 -3,-2.1 -1,-0.2 2,-0.0 2,-0.2 0.550 80.6 116.6 -98.8 -10.0 0.8 8.8 -4.4 33 183 A L < - 0 0 67 -3,-1.1 -27,-0.2 -4,-0.4 -28,-0.1 -0.423 50.4-162.7 -63.2 125.5 0.7 5.3 -2.6 34 184 A R - 0 0 117 -29,-1.2 2,-0.4 -30,-0.3 -1,-0.1 -0.234 24.7 -89.2 -97.9-170.0 4.3 4.1 -2.2 35 185 A S - 0 0 109 -2,-0.1 2,-0.5 2,-0.0 -1,-0.0 -0.885 35.1-133.6-105.8 133.3 5.7 0.6 -1.5 36 186 A L - 0 0 72 -2,-0.4 2,-0.9 -30,-0.1 -33,-0.1 -0.718 10.3-135.1 -87.3 127.6 6.2 -0.5 2.2 37 187 A T - 0 0 139 -2,-0.5 2,-0.2 -35,-0.1 -1,-0.0 -0.675 39.7-177.6 -75.4 103.3 9.6 -2.2 3.1 38 188 A R - 0 0 125 -2,-0.9 4,-0.1 1,-0.1 25,-0.0 -0.719 33.8 -86.3-109.1 158.7 8.2 -5.1 5.3 39 189 A H > - 0 0 116 -2,-0.2 3,-2.1 1,-0.1 -1,-0.1 -0.289 39.1-119.6 -58.3 145.5 9.9 -8.0 7.2 40 190 A P T 3 S+ 0 0 124 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.797 116.1 53.8 -63.0 -23.9 10.6 -11.0 5.0 41 191 A K T > S+ 0 0 101 3,-0.0 3,-1.2 2,-0.0 4,-0.4 0.172 78.2 155.8 -93.1 19.8 8.3 -13.2 7.3 42 192 A Y T < S- 0 0 62 -3,-2.1 22,-0.2 1,-0.3 21,-0.1 -0.238 76.0 -9.5 -50.0 120.5 5.4 -10.6 6.9 43 193 A K T 3 S+ 0 0 77 20,-3.1 -1,-0.3 1,-0.1 21,-0.2 0.930 97.0 121.7 51.8 57.2 2.2 -12.7 7.6 44 194 A T < + 0 0 75 -3,-1.2 2,-0.3 19,-0.4 -2,-0.1 0.570 68.7 48.3-114.6 -17.1 3.8 -16.2 7.8 45 195 A E S S- 0 0 116 -4,-0.4 20,-2.8 1,-0.0 2,-0.2 -0.876 98.3 -93.9-121.1 154.2 2.7 -17.0 11.4 46 196 A L B -b 65 0B 91 -2,-0.3 2,-0.5 18,-0.2 20,-0.2 -0.437 39.8-115.1 -67.6 135.3 -0.8 -16.7 12.9 47 197 A C > - 0 0 6 18,-2.7 4,-2.6 1,-0.2 5,-0.2 -0.555 22.1-152.8 -68.7 116.5 -1.5 -13.4 14.8 48 198 A R H > S+ 0 0 197 -2,-0.5 4,-0.9 2,-0.2 5,-0.2 0.946 92.3 49.2 -58.5 -50.6 -2.0 -14.4 18.5 49 199 A T H >>>S+ 0 0 51 2,-0.2 4,-2.4 1,-0.2 5,-0.8 0.948 115.2 43.1 -58.6 -47.9 -4.2 -11.4 19.4 50 200 A F H 3>5S+ 0 0 60 1,-0.2 4,-0.7 4,-0.2 -1,-0.2 0.922 116.8 46.5 -67.5 -39.9 -6.5 -11.8 16.3 51 201 A H H 3<5S+ 0 0 99 -4,-2.6 -1,-0.2 14,-0.1 -2,-0.2 0.549 124.8 34.9 -80.5 -0.9 -6.7 -15.7 16.8 52 202 A T H <<5S+ 0 0 115 -4,-0.9 -2,-0.2 -3,-0.8 -3,-0.2 0.768 130.2 24.5-113.0 -62.9 -7.4 -15.1 20.6 53 203 A I H <5S- 0 0 127 -4,-2.4 -3,-0.2 2,-0.3 -2,-0.1 0.656 99.9-121.5 -78.3 -14.7 -9.5 -11.9 21.1 54 204 A G S < - 0 0 1 -2,-0.3 3,-1.2 -3,-0.1 6,-0.1 -0.979 14.9-144.6-146.1 130.2 -6.0 -6.9 16.7 57 207 A P T 3 S+ 0 0 101 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.691 102.2 61.4 -70.6 -14.0 -5.2 -3.2 17.6 58 208 A Y T > S- 0 0 152 1,-0.2 3,-1.5 2,-0.1 4,-0.1 0.711 87.1-172.6 -84.7 -16.7 -2.7 -3.1 14.7 59 209 A G G X - 0 0 23 -3,-1.2 3,-1.7 1,-0.3 -1,-0.2 -0.320 64.9 -14.4 62.4-143.9 -5.6 -3.7 12.2 60 210 A P G 3 S+ 0 0 98 0, 0.0 -1,-0.3 0, 0.0 -2,-0.1 0.670 132.9 69.3 -69.5 -12.2 -4.5 -4.3 8.5 61 211 A R G < S+ 0 0 147 -3,-1.5 -2,-0.2 2,-0.0 -3,-0.0 0.510 73.2 120.2 -80.5 -4.0 -1.0 -2.9 9.5 62 212 A C < - 0 0 7 -3,-1.7 4,-0.1 1,-0.1 -15,-0.0 -0.338 61.1-145.7 -63.5 143.1 -0.4 -6.1 11.6 63 213 A H S S+ 0 0 72 -21,-0.1 -20,-3.1 2,-0.1 -19,-0.4 0.295 75.8 74.6 -93.1 10.9 2.7 -8.1 10.4 64 214 A F S S- 0 0 98 -21,-0.2 2,-0.4 -22,-0.2 -18,-0.2 -0.830 95.8 -85.3-124.4 159.9 1.1 -11.5 11.3 65 215 A I B +b 46 0B 41 -20,-2.8 -18,-2.7 -2,-0.3 -14,-0.1 -0.483 44.4 171.0 -68.7 121.6 -1.7 -13.6 9.6 66 216 A H + 0 0 31 -2,-0.4 2,-0.5 1,-0.3 -1,-0.1 0.773 69.2 1.6 -88.6 -94.1 -5.3 -12.5 10.7 67 217 A N - 0 0 106 1,-0.1 -1,-0.3 2,-0.1 -16,-0.0 -0.813 60.3-150.3 -95.6 130.7 -7.9 -14.2 8.5 68 218 A A S S+ 0 0 89 -2,-0.5 2,-0.4 -3,-0.1 -1,-0.1 0.627 83.2 71.1 -74.4 -9.3 -6.5 -16.7 5.8 69 219 A D 0 0 118 1,-0.1 -2,-0.1 -3,-0.0 -3,-0.0 -0.893 360.0 360.0-107.3 136.8 -9.6 -15.9 3.6 70 220 A E 0 0 213 -2,-0.4 -1,-0.1 0, 0.0 -3,-0.0 0.805 360.0 360.0 -74.9 360.0 -9.9 -12.4 1.8