==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CONTRACTILE PROTEIN 14-NOV-03 1RHW . COMPND 2 MOLECULE: DYNEIN LIGHT CHAIN 1, CYTOPLASMIC; . SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; . AUTHOR M.MAKOKHA,Y.J.HUANG,G.MONTELIONE,A.S.EDISON,E.BARBAR . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6641.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 66.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 16.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 12.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 26 29.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 225 0, 0.0 2,-1.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-172.1 -13.1 17.9 -13.7 2 2 A S - 0 0 98 1,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.694 360.0-173.0 -95.1 82.4 -14.7 14.9 -12.2 3 3 A D - 0 0 142 -2,-1.3 -1,-0.0 1,-0.1 0, 0.0 0.256 9.6-163.8 -57.5-167.4 -12.0 13.7 -9.8 4 4 A R - 0 0 215 1,-0.2 2,-0.3 0, 0.0 -1,-0.1 0.227 30.6 -91.4-143.5 -86.2 -12.3 10.4 -8.0 5 5 A K S S+ 0 0 173 74,-0.0 -1,-0.2 73,-0.0 2,-0.0 -0.876 78.5 7.0-175.1-155.0 -10.1 9.6 -5.0 6 6 A A S S- 0 0 24 -2,-0.3 72,-0.1 1,-0.1 20,-0.1 -0.259 74.2-137.7 -49.7 116.4 -6.8 8.0 -4.1 7 7 A V - 0 0 89 70,-0.3 70,-1.1 72,-0.1 2,-0.4 -0.264 10.3-143.6 -74.7 165.5 -5.2 7.1 -7.4 8 8 A I E +A 76 0A 58 68,-0.2 68,-0.2 1,-0.1 3,-0.1 -0.990 20.3 174.5-138.0 126.1 -3.5 3.8 -8.1 9 9 A K E + 0 0 105 66,-0.9 2,-0.4 -2,-0.4 67,-0.2 0.885 69.9 2.2 -89.8 -84.1 -0.4 3.3 -10.2 10 10 A N E +A 75 0A 78 65,-2.1 65,-2.2 1,-0.1 -1,-0.4 -0.882 63.6 137.2-111.8 141.9 0.8 -0.3 -10.0 11 11 A A - 0 0 8 -2,-0.4 62,-0.4 63,-0.3 -1,-0.1 0.417 27.4-168.4-144.7 -48.6 -0.9 -3.0 -8.1 12 12 A D + 0 0 130 1,-0.2 61,-0.3 60,-0.1 2,-0.3 0.947 52.6 95.5 43.7 73.9 -1.0 -6.2 -10.2 13 13 A M S S- 0 0 55 59,-0.1 2,-0.3 61,-0.0 -1,-0.2 -0.948 79.2 -65.6-168.5-177.2 -3.4 -8.1 -8.0 14 14 A S >> - 0 0 74 -2,-0.3 4,-3.7 1,-0.1 3,-0.6 -0.686 40.4-121.3 -89.7 140.0 -7.0 -9.0 -7.4 15 15 A E H 3>>S+ 0 0 153 -2,-0.3 4,-2.3 1,-0.2 5,-0.6 0.720 110.8 70.7 -48.8 -21.5 -9.6 -6.4 -6.5 16 16 A E H 3>5S+ 0 0 131 2,-0.2 4,-1.9 3,-0.2 -1,-0.2 0.988 115.6 16.7 -59.9 -64.2 -10.0 -8.5 -3.5 17 17 A M H <>5S+ 0 0 67 -3,-0.6 4,-2.8 2,-0.2 5,-0.3 0.791 129.0 55.6 -79.7 -30.7 -6.7 -7.7 -1.9 18 18 A Q H X5S+ 0 0 43 -4,-3.7 4,-2.8 2,-0.2 -3,-0.2 0.929 115.8 36.1 -66.8 -47.5 -6.2 -4.7 -4.0 19 19 A Q H X5S+ 0 0 73 -4,-2.3 4,-1.7 -5,-0.3 -2,-0.2 0.921 121.4 46.4 -71.2 -46.5 -9.4 -3.1 -3.0 20 20 A D H XX S+ 0 0 0 -4,-2.2 4,-4.7 -5,-0.3 3,-1.8 0.938 113.1 41.2 -51.6 -53.3 -5.8 4.8 7.0 29 29 A L H 3< S+ 0 0 40 -4,-2.6 -1,-0.3 1,-0.3 -2,-0.2 0.778 112.2 57.2 -65.6 -27.0 -4.6 8.0 5.5 30 30 A E T 3< S+ 0 0 148 -4,-2.2 -1,-0.3 -5,-0.3 -2,-0.2 0.376 120.0 30.2 -83.8 3.6 -8.2 9.2 5.8 31 31 A K T <4 S+ 0 0 152 -3,-1.8 -2,-0.2 1,-0.2 2,-0.2 0.600 119.9 49.8-126.2 -41.8 -7.9 8.5 9.5 32 32 A Y < - 0 0 84 -4,-4.7 -1,-0.2 -5,-0.2 3,-0.1 -0.620 51.1-166.4-102.3 162.6 -4.2 9.0 10.3 33 33 A N S S+ 0 0 124 -2,-0.2 2,-1.7 1,-0.1 3,-0.1 0.606 71.4 86.2-116.4 -28.1 -2.0 12.0 9.5 34 34 A I >> - 0 0 96 1,-0.2 4,-2.2 2,-0.1 3,-1.9 -0.606 62.0-166.2 -79.9 86.6 1.4 10.4 10.3 35 35 A E H 3> S+ 0 0 78 -2,-1.7 4,-3.3 1,-0.3 5,-0.5 0.864 88.4 59.1 -37.0 -52.3 2.0 8.8 6.9 36 36 A K H 3> S+ 0 0 167 1,-0.3 4,-2.0 2,-0.2 -1,-0.3 0.885 111.3 40.5 -45.9 -45.4 4.8 6.8 8.6 37 37 A D H <> S+ 0 0 70 -3,-1.9 4,-1.8 2,-0.2 -1,-0.3 0.773 112.5 58.5 -74.6 -27.6 2.1 5.4 10.9 38 38 A I H X S+ 0 0 1 -4,-2.2 4,-2.0 2,-0.2 -2,-0.2 0.972 112.6 36.1 -64.8 -56.5 -0.2 5.2 7.9 39 39 A A H X S+ 0 0 2 -4,-3.3 4,-2.6 1,-0.2 5,-0.3 0.873 118.3 52.8 -64.0 -38.3 2.0 2.9 5.9 40 40 A A H X S+ 0 0 27 -4,-2.0 4,-2.1 -5,-0.5 -1,-0.2 0.808 109.5 50.2 -66.2 -30.3 3.1 1.2 9.1 41 41 A Y H X S+ 0 0 54 -4,-1.8 4,-2.5 3,-0.2 -2,-0.2 0.831 110.1 49.5 -75.9 -34.7 -0.6 0.7 9.9 42 42 A I H X S+ 0 0 5 -4,-2.0 4,-2.5 2,-0.2 -2,-0.2 0.969 117.8 37.9 -67.8 -55.5 -1.3 -0.8 6.5 43 43 A K H X S+ 0 0 58 -4,-2.6 4,-2.8 2,-0.2 5,-0.4 0.940 121.5 45.7 -60.5 -49.8 1.6 -3.3 6.6 44 44 A K H X S+ 0 0 133 -4,-2.1 4,-1.8 -5,-0.3 -1,-0.2 0.898 110.3 55.7 -59.8 -42.3 1.0 -3.9 10.3 45 45 A E H X S+ 0 0 72 -4,-2.5 4,-0.6 2,-0.2 -1,-0.2 0.923 120.8 29.1 -55.8 -48.5 -2.7 -4.2 9.6 46 46 A F H >< S+ 0 0 19 -4,-2.5 3,-0.9 2,-0.2 -2,-0.2 0.987 116.6 53.8 -75.3 -68.6 -2.1 -6.9 7.0 47 47 A D H >< S+ 0 0 35 -4,-2.8 3,-0.8 1,-0.2 -3,-0.2 0.786 94.3 83.0 -35.9 -34.0 1.0 -8.6 8.2 48 48 A K H 3< S- 0 0 149 -4,-1.8 -1,-0.2 -5,-0.4 -2,-0.2 0.893 121.6 -14.0 -35.0 -77.2 -1.0 -8.9 11.4 49 49 A K T << S+ 0 0 199 -3,-0.9 -1,-0.3 -4,-0.6 -2,-0.2 -0.553 128.5 67.9-133.1 66.9 -2.9 -12.0 10.3 50 50 A Y S < S- 0 0 91 -3,-0.8 -3,-0.2 -2,-0.1 -2,-0.1 0.396 113.8 -40.3-141.8 -67.7 -2.2 -12.3 6.6 51 51 A N S S- 0 0 101 -5,-0.1 -4,-0.2 0, 0.0 -3,-0.1 -0.239 78.0-125.3-176.0 72.6 1.4 -13.1 5.6 52 52 A P S S+ 0 0 75 0, 0.0 2,-0.1 0, 0.0 35,-0.1 -0.330 74.0 46.9 -75.0 158.8 4.0 -11.3 7.6 53 53 A T - 0 0 62 35,-0.1 35,-0.5 1,-0.1 2,-0.3 0.498 62.9-179.5 -99.8 151.5 6.2 -9.7 7.4 54 54 A W - 0 0 9 33,-0.2 2,-0.5 -11,-0.1 33,-0.2 -0.752 13.7-150.9-102.1 149.6 5.2 -7.0 5.0 55 55 A H E +B 86 0A 60 31,-3.3 31,-1.9 -2,-0.3 2,-0.3 -0.973 16.9 177.4-125.8 117.0 7.5 -4.2 3.9 56 56 A C E -B 85 0A 19 -2,-0.5 2,-0.3 29,-0.2 29,-0.2 -0.860 8.4-162.1-117.5 152.4 6.1 -0.8 2.9 57 57 A I E -B 84 0A 87 27,-2.0 27,-2.5 -2,-0.3 2,-0.4 -0.975 9.2-160.7-135.3 147.8 7.9 2.4 1.9 58 58 A V + 0 0 53 -2,-0.3 25,-0.1 25,-0.2 -22,-0.1 -0.843 47.4 108.0-132.6 94.9 6.9 6.0 1.7 59 59 A G S S- 0 0 43 -2,-0.4 23,-0.4 22,-0.0 3,-0.1 0.396 79.7 -86.3-125.9 -96.8 9.1 8.1 -0.5 60 60 A R S S+ 0 0 225 1,-0.4 2,-0.3 21,-0.1 23,-0.1 0.332 96.3 14.1-155.1 -42.4 8.1 9.5 -3.8 61 61 A N - 0 0 124 21,-0.1 -1,-0.4 23,-0.0 2,-0.4 -0.993 51.8-163.2-147.6 147.4 8.8 6.9 -6.5 62 62 A F + 0 0 35 -2,-0.3 2,-0.6 -3,-0.1 13,-0.0 -0.851 16.4 164.9-137.8 99.3 9.7 3.2 -6.5 63 63 A G + 0 0 75 -2,-0.4 -2,-0.0 1,-0.1 0, 0.0 -0.874 40.4 92.2-119.3 97.4 11.2 1.8 -9.7 64 64 A S + 0 0 64 -2,-0.6 2,-2.8 4,-0.0 5,-0.1 0.310 21.5 136.6-141.2 -80.3 12.7 -1.7 -9.1 65 65 A Y S S+ 0 0 180 1,-0.2 2,-2.2 3,-0.1 4,-0.4 -0.296 80.3 57.2 57.8 -76.3 10.6 -4.8 -9.7 66 66 A V S S+ 0 0 112 -2,-2.8 -1,-0.2 1,-0.2 -3,-0.0 -0.312 113.1 43.0 -79.6 54.4 13.4 -6.5 -11.5 67 67 A T S S+ 0 0 97 -2,-2.2 -1,-0.2 0, 0.0 -2,-0.0 0.217 123.2 20.3-155.4 -65.7 15.7 -6.1 -8.4 68 68 A H S S- 0 0 143 20,-0.0 -2,-0.1 0, 0.0 -3,-0.1 -0.277 82.5-174.8-113.4 43.4 14.0 -6.7 -5.1 69 69 A E + 0 0 116 -4,-0.4 2,-0.2 1,-0.1 -3,-0.1 0.112 6.6 174.0 -36.0 152.8 11.2 -8.8 -6.4 70 70 A T - 0 0 23 1,-0.1 18,-0.2 18,-0.1 3,-0.1 -0.401 36.8-102.6-138.7-145.3 8.6 -9.9 -3.9 71 71 A R S S+ 0 0 149 16,-1.6 2,-0.5 1,-0.3 -1,-0.1 0.695 94.7 11.9-118.0 -64.2 5.3 -11.6 -3.6 72 72 A H S S+ 0 0 87 15,-0.4 15,-2.1 2,-0.0 2,-0.3 -0.981 73.0 153.8-127.4 120.0 2.4 -9.1 -3.2 73 73 A F E - C 0 86A 65 -2,-0.5 13,-0.3 -62,-0.4 2,-0.3 -0.935 19.5-171.9-141.1 162.5 3.0 -5.4 -3.7 74 74 A I E - C 0 85A 3 11,-2.9 11,-2.3 -2,-0.3 2,-0.6 -0.851 4.9-165.1-160.8 119.1 1.0 -2.3 -4.6 75 75 A Y E +AC 10 84A 31 -65,-2.2 -65,-2.1 -2,-0.3 -66,-0.9 -0.936 30.8 134.9-113.1 115.7 2.3 1.2 -5.3 76 76 A F E -AC 8 83A 5 7,-2.4 7,-2.3 -2,-0.6 2,-0.6 -0.863 54.7 -91.2-146.2 178.2 -0.2 4.0 -5.4 77 77 A Y E - C 0 82A 70 -70,-1.1 2,-0.6 -2,-0.3 -70,-0.3 -0.887 31.7-158.6-103.8 117.1 -0.9 7.6 -4.2 78 78 A L E > - C 0 81A 0 3,-1.7 2,-2.0 -2,-0.6 3,-2.0 -0.851 65.4 -46.9 -97.9 117.8 -2.6 7.9 -0.9 79 79 A G T 3 S- 0 0 48 -2,-0.6 -72,-0.1 1,-0.3 -2,-0.1 -0.407 128.3 -23.7 63.5 -83.9 -4.3 11.3 -0.4 80 80 A Q T 3 S+ 0 0 154 -2,-2.0 2,-0.3 -74,-0.1 -1,-0.3 0.005 125.8 72.2-148.1 28.5 -1.4 13.3 -1.5 81 81 A V E < S- C 0 78A 30 -3,-2.0 -3,-1.7 -46,-0.0 2,-0.3 -0.884 76.8-104.8-140.5 169.7 1.6 11.1 -1.0 82 82 A A E - C 0 77A 6 -23,-0.4 2,-0.3 -2,-0.3 -5,-0.2 -0.711 28.8-176.1 -99.4 150.8 3.1 7.9 -2.4 83 83 A I E - C 0 76A 4 -7,-2.3 -7,-2.4 -2,-0.3 2,-0.6 -0.910 7.1-176.2-151.2 117.7 2.9 4.5 -0.8 84 84 A L E -BC 57 75A 35 -27,-2.5 -27,-2.0 -2,-0.3 2,-0.3 -0.917 11.0-176.3-119.9 103.4 4.6 1.3 -2.1 85 85 A L E +BC 56 74A 4 -11,-2.3 -11,-2.9 -2,-0.6 2,-0.3 -0.778 9.1 162.6-100.5 143.5 3.7 -1.8 -0.1 86 86 A F E -BC 55 73A 38 -31,-1.9 -31,-3.3 -2,-0.3 2,-0.7 -0.966 35.1-129.3-160.6 142.9 5.2 -5.2 -0.8 87 87 A K + 0 0 19 -15,-2.1 -16,-1.6 -2,-0.3 -15,-0.4 -0.861 35.7 166.2 -99.5 111.7 5.6 -8.5 1.0 88 88 A S 0 0 27 -2,-0.7 -35,-0.1 -35,-0.5 -18,-0.1 -0.993 360.0 360.0-130.5 127.2 9.2 -9.7 1.0 89 89 A G 0 0 91 -2,-0.4 -1,-0.2 -37,-0.0 -36,-0.1 0.982 360.0 360.0 -72.4 360.0 10.7 -12.5 3.1