==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE(ENDORIBONUCLEASE) 07-NOV-91 1RN4 . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR W.SAENGER,G.KOELLNER . 100 2 2 1 1 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5462.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 60.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 28.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 15.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 3 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 114 0, 0.0 2,-1.5 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0-175.1 21.0 23.9 -6.8 2 2 A a + 0 0 67 1,-0.2 10,-0.2 10,-0.1 3,-0.1 -0.559 360.0 157.4 -90.2 89.3 20.8 26.6 -4.0 3 3 A D S S+ 0 0 78 -2,-1.5 2,-0.4 8,-0.7 9,-0.2 0.848 76.5 28.7 -72.3 -30.9 17.1 26.8 -3.5 4 4 A Y E S-A 11 0A 58 7,-2.3 7,-2.9 -3,-0.2 2,-0.6 -0.995 71.4-162.9-134.4 130.1 17.8 28.2 -0.0 5 5 A T E +A 10 0A 50 -2,-0.4 96,-2.4 5,-0.2 2,-0.8 -0.958 8.5 178.7-122.7 116.6 20.9 30.3 0.9 6 6 A b E > -A 9 0A 3 3,-2.7 3,-2.2 -2,-0.6 2,-0.1 -0.775 61.4 -78.9-109.7 81.1 21.6 30.6 4.6 7 7 A G T 3 S+ 0 0 67 -2,-0.8 -1,-0.1 1,-0.3 94,-0.1 -0.434 119.3 2.5 64.2-128.2 24.8 32.7 4.7 8 8 A S T 3 S+ 0 0 125 -2,-0.1 2,-0.5 -3,-0.1 -1,-0.3 0.601 121.4 85.8 -59.1 -24.4 27.7 30.3 3.9 9 9 A N E < -A 6 0A 45 -3,-2.2 -3,-2.7 2,-0.0 2,-0.5 -0.723 56.2-165.5 -98.8 128.5 25.3 27.3 3.3 10 10 A a E -A 5 0A 66 -2,-0.5 2,-0.4 -5,-0.2 -5,-0.2 -0.916 12.8-172.5-107.3 129.5 23.4 26.4 0.1 11 11 A Y E -A 4 0A 8 -7,-2.9 -7,-2.3 -2,-0.5 -8,-0.7 -0.996 14.4-142.0-127.5 139.7 20.6 23.9 0.5 12 12 A S > - 0 0 25 -2,-0.4 4,-2.2 -10,-0.2 3,-0.2 -0.415 33.4-108.7 -86.7 163.9 18.5 22.2 -2.3 13 13 A S H > S+ 0 0 65 1,-0.2 4,-2.4 2,-0.2 5,-0.1 0.840 124.0 56.8 -60.2 -29.8 14.7 21.6 -1.8 14 14 A S H > S+ 0 0 75 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.870 104.0 50.3 -71.2 -43.5 15.8 17.9 -1.5 15 15 A D H > S+ 0 0 73 1,-0.2 4,-2.0 2,-0.2 -2,-0.2 0.897 113.9 47.7 -62.3 -42.1 18.1 18.7 1.5 16 16 A V H X S+ 0 0 2 -4,-2.2 4,-2.9 2,-0.2 -2,-0.2 0.889 108.2 51.6 -66.3 -44.2 15.2 20.6 3.0 17 17 A S H X S+ 0 0 62 -4,-2.4 4,-2.2 1,-0.2 -2,-0.2 0.880 109.8 51.8 -67.2 -29.4 12.6 17.9 2.5 18 18 A T H X S+ 0 0 83 -4,-2.0 4,-1.8 2,-0.2 -2,-0.2 0.940 112.8 43.6 -69.6 -47.3 14.9 15.3 4.2 19 19 A A H X S+ 0 0 10 -4,-2.0 4,-2.2 1,-0.2 -2,-0.2 0.916 113.8 51.4 -62.2 -46.9 15.5 17.4 7.3 20 20 A Q H X S+ 0 0 19 -4,-2.9 4,-3.0 1,-0.2 5,-0.3 0.865 107.7 52.0 -57.6 -41.6 11.8 18.3 7.5 21 21 A A H X S+ 0 0 54 -4,-2.2 4,-2.0 2,-0.2 -1,-0.2 0.866 108.8 50.3 -64.2 -31.6 10.7 14.7 7.3 22 22 A A H X S+ 0 0 24 -4,-1.8 4,-1.8 1,-0.2 5,-0.2 0.935 114.6 45.3 -73.6 -43.8 13.1 13.7 10.2 23 23 A G H X S+ 0 0 0 -4,-2.2 4,-2.4 1,-0.2 -2,-0.2 0.895 113.3 48.9 -64.6 -38.7 11.7 16.6 12.3 24 24 A Y H X S+ 0 0 46 -4,-3.0 4,-3.4 1,-0.2 -1,-0.2 0.906 107.6 54.9 -69.2 -41.0 8.1 15.9 11.5 25 25 A K H X S+ 0 0 98 -4,-2.0 4,-1.6 -5,-0.3 -1,-0.2 0.943 111.6 43.3 -56.5 -46.5 8.5 12.2 12.3 26 26 A L H X>S+ 0 0 41 -4,-1.8 5,-2.2 1,-0.2 4,-1.2 0.905 110.7 56.2 -65.2 -39.4 9.8 13.1 15.8 27 27 A H H ><5S+ 0 0 42 -4,-2.4 3,-1.1 1,-0.2 -2,-0.2 0.937 108.1 48.9 -60.5 -47.1 7.1 15.7 16.2 28 28 A E H 3<5S+ 0 0 121 -4,-3.4 -1,-0.2 1,-0.3 -2,-0.2 0.809 110.4 49.4 -63.9 -30.6 4.5 13.0 15.5 29 29 A D H 3<5S- 0 0 96 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.2 0.568 111.0-120.8 -78.5 -12.8 6.1 10.6 18.0 30 30 A G T <<5 + 0 0 71 -4,-1.2 2,-0.3 -3,-1.1 -3,-0.2 0.723 68.2 141.1 79.2 17.5 6.1 13.3 20.6 31 31 A E < - 0 0 114 -5,-2.2 2,-0.3 -6,-0.2 -1,-0.3 -0.714 33.0-166.7 -98.0 152.2 10.0 12.8 20.8 32 32 A T - 0 0 65 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.969 3.8-158.8-137.1 155.0 12.7 15.5 21.1 33 33 A V B > +B 38 0B 32 5,-2.5 5,-2.3 -2,-0.3 37,-0.2 -0.966 49.1 20.5-136.1 148.8 16.5 15.6 20.7 34 34 A G T > 5S- 0 0 31 -2,-0.3 3,-1.8 3,-0.2 38,-0.1 0.089 93.4 -66.7 84.8 164.0 19.2 17.9 22.0 35 35 A S T 3 5S+ 0 0 112 1,-0.3 -1,-0.1 36,-0.2 37,-0.1 0.875 135.1 46.6 -54.9 -46.5 19.5 20.3 24.8 36 36 A N T 3 5S- 0 0 101 -3,-0.1 -1,-0.3 4,-0.0 -2,-0.1 0.217 110.9-124.3 -82.3 7.3 16.9 22.7 23.3 37 37 A S T < 5 - 0 0 52 -3,-1.8 -3,-0.2 1,-0.1 -2,-0.1 0.921 37.2-131.7 43.5 69.6 14.5 19.7 22.6 38 38 A Y B + 0 0 31 1,-0.1 3,-0.9 2,-0.1 -2,-0.0 0.910 43.3 160.2 53.2 50.6 7.5 33.7 14.5 45 45 A Y T 3 + 0 0 198 1,-0.2 -1,-0.1 2,-0.1 51,-0.0 0.721 69.9 67.2 -76.1 -17.1 8.2 36.8 16.5 46 46 A E T 3 S- 0 0 60 1,-0.0 -1,-0.2 52,-0.0 -2,-0.1 0.622 106.1-131.4 -70.5 -15.8 10.3 38.0 13.6 47 47 A G < + 0 0 50 -3,-0.9 -2,-0.1 1,-0.2 2,-0.1 0.893 36.6 178.9 65.3 43.0 7.0 38.3 11.6 48 48 A F - 0 0 32 1,-0.1 2,-1.1 50,-0.0 -1,-0.2 -0.457 34.1-117.4 -68.7 148.2 8.1 36.5 8.5 49 49 A D - 0 0 151 -2,-0.1 2,-0.2 2,-0.0 -1,-0.1 -0.788 40.8-178.0 -98.2 92.7 5.6 36.1 5.8 50 50 A F - 0 0 24 -2,-1.1 38,-0.1 2,-0.2 37,-0.1 -0.486 31.1-133.8 -87.2 154.7 5.2 32.3 5.5 51 51 A S S S+ 0 0 107 36,-0.6 2,-0.3 -2,-0.2 36,-0.1 0.444 85.5 58.3 -85.3 -9.5 2.9 30.6 2.9 52 52 A V S S- 0 0 22 35,-0.1 -2,-0.2 33,-0.1 2,-0.2 -0.901 87.3-103.6-130.0 160.4 1.4 28.2 5.4 53 53 A S - 0 0 85 -2,-0.3 29,-0.2 1,-0.1 32,-0.1 -0.393 46.6 -92.0 -83.5 154.0 -0.4 28.6 8.6 54 54 A S S S+ 0 0 76 -2,-0.2 2,-0.2 27,-0.1 -1,-0.1 -0.251 78.1 103.5 -79.8 173.5 0.9 28.1 12.1 55 55 A P - 0 0 53 0, 0.0 27,-1.2 0, 0.0 2,-0.3 0.526 66.5-164.9 -64.7 152.2 1.5 26.5 14.5 56 56 A Y E -CD 42 81C 26 -14,-0.7 -14,-2.1 -2,-0.2 2,-0.3 -0.797 12.0-160.9-111.3 154.5 5.1 26.3 13.3 57 57 A Y E -CD 41 80C 17 23,-2.3 23,-2.0 -16,-0.3 2,-0.4 -0.972 10.7-143.3-132.3 141.4 7.8 23.9 14.5 58 58 A E E +CD 40 79C 16 -18,-3.1 -18,-1.2 -2,-0.3 21,-0.2 -0.879 18.7 174.9-115.3 147.5 11.6 24.4 14.1 59 59 A W E - D 0 78C 3 19,-2.0 19,-3.5 -2,-0.4 2,-0.1 -0.987 35.8-104.6-145.3 140.0 14.2 21.7 13.4 60 60 A P E - D 0 77C 1 0, 0.0 2,-0.5 0, 0.0 8,-0.5 -0.342 24.1-159.1 -70.3 140.5 17.8 22.2 12.6 61 61 A I E - D 0 76C 9 15,-1.8 15,-0.5 12,-0.2 2,-0.4 -0.978 19.6-143.7-115.5 128.9 19.1 21.7 9.0 62 62 A L > - 0 0 34 4,-0.6 3,-1.0 -2,-0.5 12,-0.1 -0.812 14.8-140.5-107.9 139.8 22.8 21.0 9.0 63 63 A S T 3 S+ 0 0 80 -2,-0.4 -53,-0.1 1,-0.2 -1,-0.1 0.778 100.6 63.6 -61.0 -31.8 25.4 22.2 6.5 64 64 A S T 3 S- 0 0 77 1,-0.1 -1,-0.2 2,-0.0 3,-0.1 0.735 110.4-117.5 -65.9 -23.2 27.2 18.8 6.6 65 65 A G S < S+ 0 0 59 -3,-1.0 -2,-0.1 1,-0.4 -1,-0.1 0.378 73.2 130.5 97.6 -6.7 24.1 17.0 5.2 66 66 A D - 0 0 110 1,-0.1 -4,-0.6 -5,-0.0 2,-0.4 -0.343 64.8-108.4 -74.7 163.2 23.8 14.9 8.4 67 67 A V - 0 0 76 -6,-0.1 2,-0.2 -3,-0.1 -6,-0.1 -0.781 37.6-106.3 -91.4 133.6 20.5 14.6 10.1 68 68 A Y + 0 0 7 -8,-0.5 3,-0.1 -2,-0.4 -1,-0.1 -0.409 52.6 155.6 -61.5 128.5 20.3 16.4 13.4 69 69 A S - 0 0 96 1,-0.5 -35,-0.2 -2,-0.2 2,-0.2 -0.012 62.5 -53.7-146.4 32.1 20.4 13.8 16.2 70 70 A G S S+ 0 0 31 -37,-0.2 -1,-0.5 1,-0.2 2,-0.1 -0.476 93.1 64.6 116.7 171.3 21.8 15.9 19.1 71 71 A G S S+ 0 0 51 -2,-0.2 -36,-0.2 -3,-0.1 -1,-0.2 -0.456 98.0 9.5 76.7-157.8 24.6 18.2 20.1 72 72 A S - 0 0 100 1,-0.1 3,-0.1 -2,-0.1 -2,-0.1 -0.427 56.5-159.4 -60.5 121.9 25.1 21.7 18.4 73 73 A P - 0 0 21 0, 0.0 3,-0.3 0, 0.0 -12,-0.2 0.453 28.5-146.0 -80.7 -11.3 22.1 22.7 16.1 74 74 A G - 0 0 43 1,-0.2 -12,-0.1 -14,-0.1 0, 0.0 -0.306 37.9 -65.2 74.7-160.7 24.2 25.1 14.2 75 75 A A S S+ 0 0 45 -14,-0.1 17,-2.1 -3,-0.1 2,-0.3 0.666 102.8 86.4-106.2 -13.6 22.5 28.3 12.9 76 76 A D E -DE 61 91C 5 -15,-0.5 -15,-1.8 -3,-0.3 2,-0.3 -0.695 49.2-175.5 -99.9 147.5 20.0 27.0 10.3 77 77 A R E -DE 60 90C 17 13,-2.8 13,-2.3 -2,-0.3 2,-0.4 -0.990 21.5-143.0-138.0 142.0 16.5 25.8 10.9 78 78 A V E -DE 59 89C 0 -19,-3.5 -19,-2.0 -2,-0.3 2,-0.5 -0.819 23.2-153.7 -91.3 138.6 13.7 24.3 8.7 79 79 A V E +DE 58 88C 0 9,-2.7 8,-2.7 -2,-0.4 9,-1.7 -0.994 23.1 164.1-117.2 129.7 10.2 25.6 9.8 80 80 A F E -DE 57 86C 0 -23,-2.0 -23,-2.3 -2,-0.5 6,-0.2 -0.854 25.1-125.6-137.3 165.2 7.2 23.4 9.1 81 81 A N E > -D 56 0C 3 4,-2.2 3,-2.2 -2,-0.3 -25,-0.2 -0.533 36.2 -88.1-108.7-173.0 3.7 23.3 10.4 82 82 A E T 3 S+ 0 0 76 -27,-1.2 -26,-0.1 1,-0.3 -28,-0.1 0.750 125.0 55.7 -61.4 -25.9 1.3 20.8 12.0 83 83 A N T 3 S- 0 0 120 2,-0.1 -1,-0.3 1,-0.0 3,-0.1 0.208 119.9-106.5 -91.3 13.8 0.2 19.6 8.6 84 84 A N S < S+ 0 0 67 -3,-2.2 2,-0.4 1,-0.3 -2,-0.2 0.855 74.2 144.5 66.4 35.8 3.9 18.7 7.5 85 85 A Q - 0 0 85 -4,-0.2 -4,-2.2 -32,-0.1 2,-0.4 -0.869 53.1-118.0-101.4 140.0 3.9 21.8 5.2 86 86 A L E +E 80 0C 48 -2,-0.4 -6,-0.3 -6,-0.2 -35,-0.2 -0.646 28.9 179.3 -80.8 130.4 7.1 23.8 4.8 87 87 A A E - 0 0 6 -8,-2.7 -36,-0.6 -2,-0.4 2,-0.3 0.819 54.9 -68.2 -98.0 -35.7 6.9 27.3 5.9 88 88 A G E -E 79 0C 5 -9,-1.7 -9,-2.7 -38,-0.1 2,-0.4 -0.959 39.8 -93.5 166.1-176.9 10.4 28.4 5.2 89 89 A V E -E 78 0C 0 -2,-0.3 11,-2.6 11,-0.2 2,-0.3 -0.997 40.4-176.0-129.3 126.0 14.2 28.1 6.1 90 90 A I E -EF 77 99C 0 -13,-2.3 -13,-2.8 -2,-0.4 2,-0.3 -0.822 11.5-152.1-124.4 162.4 15.7 30.6 8.6 91 91 A T E -EF 76 98C 20 7,-3.1 7,-2.6 -2,-0.3 -15,-0.2 -0.993 24.4-105.5-139.9 146.7 19.1 31.4 10.0 92 92 A A E F 0 97C 39 -17,-2.1 5,-0.3 -2,-0.3 -17,-0.1 -0.451 360.0 360.0 -70.5 146.8 20.4 32.9 13.3 93 93 A T 0 0 122 3,-2.0 3,-0.3 -2,-0.1 -1,-0.0 -0.406 360.0 360.0 -99.0 360.0 21.8 36.4 13.6 94 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 95 98 A N 0 0 138 0, 0.0 2,-0.4 0, 0.0 -3,-0.0 0.000 360.0 360.0 360.0 -50.0 16.9 32.9 19.3 96 99 A N - 0 0 112 -3,-0.3 -3,-2.0 -51,-0.0 2,-0.3 -0.986 360.0-177.2-130.5 134.3 16.8 35.7 16.7 97 100 A F E -F 92 0C 11 -2,-0.4 2,-0.3 -5,-0.3 -5,-0.2 -0.882 27.0-156.9-134.1 168.0 16.6 35.0 13.0 98 101 A V E -F 91 0C 73 -7,-2.6 -7,-3.1 -2,-0.3 2,-0.2 -0.854 41.7-100.2-127.9 154.9 16.6 36.2 9.4 99 102 A E E -F 90 0C 88 -2,-0.3 -9,-0.3 -9,-0.2 2,-0.2 -0.539 34.8-114.9 -77.4 147.4 15.1 34.2 6.5 100 103 A b 0 0 10 -11,-2.6 -94,-0.2 -2,-0.2 -11,-0.2 -0.596 360.0 360.0 -76.2 150.0 17.4 32.3 4.1 101 104 A T 0 0 141 -96,-2.4 -1,-0.1 -2,-0.2 -95,-0.1 0.769 360.0 360.0 -77.9 360.0 17.4 33.7 0.5