==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE(ENDORIBONUCLEASE) 10-JUL-87 1RNT . COMPND 2 MOLECULE: RIBONUCLEASE T1 ISOZYME; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR W.SAENGER,R.ARNI,U.HEINEMANN,R.TOKUOKA . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5566.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 56.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 153 0, 0.0 2,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 159.3 6.1 55.0 5.3 2 2 A a - 0 0 48 1,-0.1 10,-0.2 10,-0.1 3,-0.2 -0.594 360.0-158.1 -80.2 131.9 7.6 51.8 6.8 3 3 A D S S+ 0 0 85 8,-1.4 2,-0.4 -2,-0.3 9,-0.2 0.876 93.1 15.5 -74.0 -35.7 6.2 48.4 6.1 4 4 A Y E S-A 11 0A 54 7,-2.3 7,-2.5 100,-0.1 2,-0.6 -0.986 71.8-161.2-137.9 128.3 7.9 47.2 9.4 5 5 A T E -A 10 0A 47 -2,-0.4 99,-2.0 5,-0.2 2,-0.7 -0.971 5.1-174.1-119.4 118.3 9.1 49.5 12.0 6 6 A b E > -A 9 0A 1 3,-2.7 3,-2.0 -2,-0.6 2,-0.6 -0.869 67.3 -62.9-106.8 87.1 11.6 48.0 14.5 7 7 A G T 3 S- 0 0 45 -2,-0.7 97,-0.1 1,-0.3 84,-0.0 -0.720 121.4 -16.2 71.8-116.3 12.1 50.7 17.1 8 8 A S T 3 S+ 0 0 124 -2,-0.6 2,-0.4 -3,-0.1 -1,-0.3 0.267 117.3 102.0 -94.8 -12.5 13.7 53.5 15.0 9 9 A N E < -A 6 0A 49 -3,-2.0 -3,-2.7 -7,-0.0 2,-0.5 -0.765 57.8-154.7 -90.4 134.7 14.5 51.3 12.0 10 10 A a E -A 5 0A 71 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.920 12.2-177.2-109.4 124.0 12.3 51.3 9.0 11 11 A Y E -A 4 0A 4 -7,-2.5 -7,-2.3 -2,-0.5 -8,-1.4 -0.960 14.1-152.0-127.8 139.2 12.0 48.5 6.5 12 12 A S > - 0 0 34 -2,-0.4 4,-1.4 -9,-0.2 3,-0.2 -0.537 39.7-103.0 -91.8 168.7 10.0 48.0 3.3 13 13 A S H > S+ 0 0 58 1,-0.2 4,-2.5 -2,-0.2 5,-0.2 0.804 123.7 58.6 -58.7 -37.5 8.8 44.6 2.1 14 14 A S H > S+ 0 0 74 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.863 102.7 51.7 -64.8 -42.7 11.7 44.6 -0.4 15 15 A D H > S+ 0 0 55 -3,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.862 113.0 46.4 -60.2 -42.1 14.2 44.9 2.5 16 16 A V H X S+ 0 0 2 -4,-1.4 4,-2.1 2,-0.2 -2,-0.2 0.887 111.2 49.7 -69.0 -42.4 12.6 42.0 4.2 17 17 A S H X S+ 0 0 66 -4,-2.5 4,-2.6 1,-0.2 -2,-0.2 0.874 110.9 52.0 -66.1 -34.9 12.4 39.8 1.0 18 18 A T H X S+ 0 0 79 -4,-2.0 4,-1.3 2,-0.2 -2,-0.2 0.928 111.9 43.3 -67.4 -46.7 16.1 40.5 0.4 19 19 A A H X S+ 0 0 6 -4,-1.8 4,-2.5 2,-0.2 -2,-0.2 0.827 115.3 51.5 -59.9 -48.7 17.3 39.5 3.9 20 20 A Q H X S+ 0 0 22 -4,-2.1 4,-2.8 2,-0.2 5,-0.2 0.934 105.3 52.9 -62.2 -49.7 15.1 36.5 3.8 21 21 A A H X S+ 0 0 60 -4,-2.6 4,-1.8 1,-0.2 -1,-0.2 0.900 113.3 46.5 -55.6 -38.4 16.3 35.2 0.5 22 22 A A H X S+ 0 0 8 -4,-1.3 4,-1.8 2,-0.2 -2,-0.2 0.948 112.8 47.6 -67.0 -51.1 19.9 35.5 1.9 23 23 A G H X S+ 0 0 0 -4,-2.5 4,-1.8 1,-0.2 -2,-0.2 0.892 112.3 50.7 -58.6 -47.7 19.1 33.7 5.2 24 24 A Y H X S+ 0 0 40 -4,-2.8 4,-2.5 1,-0.2 -1,-0.2 0.877 106.2 52.2 -68.4 -37.4 17.2 30.9 3.5 25 25 A K H X S+ 0 0 93 -4,-1.8 4,-2.1 -5,-0.2 -1,-0.2 0.885 111.1 48.0 -70.2 -34.5 20.0 30.0 0.9 26 26 A L H X>S+ 0 0 22 -4,-1.8 5,-2.5 2,-0.2 4,-0.7 0.896 111.9 51.6 -69.1 -36.4 22.5 29.7 3.8 27 27 A H H ><5S+ 0 0 41 -4,-1.8 3,-0.8 2,-0.2 -2,-0.2 0.930 111.1 45.9 -62.3 -49.0 20.0 27.6 5.6 28 28 A E H 3<5S+ 0 0 117 -4,-2.5 -2,-0.2 1,-0.2 -1,-0.2 0.864 115.6 48.1 -61.3 -36.6 19.5 25.3 2.6 29 29 A D H 3<5S- 0 0 93 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.523 109.2-123.9 -82.7 -7.4 23.3 25.2 2.1 30 30 A G T <<5 + 0 0 69 -3,-0.8 2,-0.3 -4,-0.7 -3,-0.2 0.778 65.0 140.5 65.2 29.4 23.9 24.4 5.8 31 31 A E < - 0 0 114 -5,-2.5 2,-0.3 -6,-0.2 -1,-0.3 -0.728 34.6-162.7-104.7 146.6 26.2 27.4 6.1 32 32 A T - 0 0 80 -2,-0.3 2,-0.4 -3,-0.1 5,-0.1 -0.964 1.7-163.3-126.5 148.1 26.3 29.8 9.0 33 33 A V B > +B 38 0B 39 5,-3.7 5,-2.9 -2,-0.3 3,-0.2 -0.987 47.5 24.0-133.8 148.9 27.6 33.3 9.4 34 34 A G T > 5S- 0 0 28 -2,-0.4 3,-1.5 3,-0.2 38,-0.1 -0.045 91.1 -74.7 91.9 163.0 28.5 35.5 12.5 35 35 A S T 3 5S+ 0 0 126 1,-0.3 -1,-0.2 36,-0.3 37,-0.1 0.567 134.3 52.2 -69.5 -20.9 29.5 34.7 16.0 36 36 A N T 3 5S- 0 0 83 -3,-0.2 -1,-0.3 4,-0.0 -2,-0.1 0.233 114.2-122.5 -94.4 -0.8 25.9 33.8 16.7 37 37 A S T < 5 - 0 0 55 -3,-1.5 -3,-0.2 1,-0.1 -2,-0.1 0.947 39.5-127.4 53.9 72.4 25.9 31.5 13.7 38 38 A Y B + 0 0 33 1,-0.1 3,-1.1 2,-0.1 -2,-0.1 0.877 43.2 162.7 61.3 43.4 9.6 31.2 19.7 45 45 A Y T 3 S+ 0 0 202 1,-0.3 -1,-0.1 2,-0.1 54,-0.0 0.867 71.3 64.2 -56.8 -40.5 10.0 31.4 23.5 46 46 A E T 3 S- 0 0 55 1,-0.1 -1,-0.3 55,-0.0 -2,-0.1 0.748 107.4-128.2 -53.5 -31.7 8.0 34.6 23.2 47 47 A G < - 0 0 52 -3,-1.1 2,-0.2 1,-0.2 -2,-0.1 0.855 35.7-178.2 81.0 36.6 5.0 32.8 22.0 48 48 A F - 0 0 46 1,-0.1 2,-1.5 53,-0.0 -1,-0.2 -0.447 30.1-128.0 -65.7 128.8 4.3 34.8 18.9 49 49 A D - 0 0 170 -2,-0.2 2,-0.3 2,-0.0 -1,-0.1 -0.667 36.8-177.8 -83.8 88.1 1.2 33.6 17.1 50 50 A F - 0 0 37 -2,-1.5 38,-0.1 2,-0.1 37,-0.1 -0.716 26.7-143.8 -90.4 145.8 2.7 33.2 13.6 51 51 A S S S+ 0 0 125 36,-0.3 2,-0.3 -2,-0.3 -1,-0.1 0.342 81.9 71.3 -89.7 -2.4 0.4 32.1 10.7 52 52 A V S S- 0 0 21 35,-0.1 2,-0.2 33,-0.1 -2,-0.1 -0.711 90.3-103.0-107.7 158.5 3.1 30.0 9.0 53 53 A S - 0 0 77 -2,-0.3 29,-0.3 1,-0.1 30,-0.2 -0.508 44.3 -65.2 -93.5 166.0 4.3 26.7 10.6 54 54 A S S S+ 0 0 81 -2,-0.2 2,-0.2 27,-0.1 -1,-0.1 -0.303 84.9 69.4 -77.4 158.9 7.3 25.6 12.5 55 55 A P - 0 0 41 0, 0.0 27,-0.9 0, 0.0 2,-0.3 0.547 67.1-166.0 -75.2 161.1 10.3 25.2 12.6 56 56 A Y E -CD 42 81C 18 -14,-0.7 -14,-2.8 25,-0.2 2,-0.3 -0.835 9.9-161.8-114.9 154.0 11.4 28.8 12.4 57 57 A Y E -CD 41 80C 34 23,-2.1 23,-2.0 -16,-0.3 2,-0.4 -0.944 9.6-144.6-133.2 142.9 14.8 30.3 11.7 58 58 A E E +CD 40 79C 13 -18,-2.3 -18,-1.6 -2,-0.3 21,-0.2 -0.928 16.9 176.5-118.0 143.8 16.0 33.9 12.4 59 59 A W E - D 0 78C 0 19,-1.9 19,-3.4 -2,-0.4 -40,-0.1 -0.989 34.3-106.8-141.9 134.3 18.4 35.9 10.3 60 60 A P E - D 0 77C 0 0, 0.0 8,-0.5 0, 0.0 2,-0.4 -0.375 22.4-157.2 -66.4 148.3 19.4 39.5 10.9 61 61 A I - 0 0 8 15,-1.1 15,-0.4 12,-0.2 2,-0.4 -0.948 18.6-142.0-122.3 130.5 18.1 42.4 8.8 62 62 A L > - 0 0 35 4,-0.7 3,-1.4 -2,-0.4 12,-0.1 -0.885 15.3-137.9-105.3 141.5 20.3 45.5 8.9 63 63 A S T 3 S+ 0 0 83 -2,-0.4 -53,-0.1 1,-0.3 -1,-0.1 0.643 101.3 70.2 -69.8 -18.7 19.3 49.2 8.9 64 64 A S T 3 S- 0 0 82 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.735 109.2-119.5 -69.8 -26.5 22.1 49.8 6.4 65 65 A G S < S+ 0 0 52 -3,-1.4 2,-0.2 1,-0.5 -2,-0.1 0.394 75.0 126.8 98.3 -3.9 20.1 48.0 3.6 66 66 A D - 0 0 117 1,-0.1 -4,-0.7 -4,-0.0 -1,-0.5 -0.587 66.6-111.1 -84.8 154.2 23.1 45.6 3.4 67 67 A V - 0 0 60 -2,-0.2 -6,-0.1 -3,-0.1 2,-0.1 -0.666 43.8 -96.4 -84.1 141.2 22.7 41.8 3.6 68 68 A Y + 0 0 8 -8,-0.5 -1,-0.1 -2,-0.3 3,-0.1 -0.345 51.6 159.5 -63.4 132.4 24.1 40.3 6.7 69 69 A S - 0 0 100 1,-0.6 -35,-0.2 -2,-0.1 2,-0.2 0.236 61.8 -65.6-138.0 20.1 27.6 38.9 6.2 70 70 A G S S+ 0 0 27 -37,-0.2 -1,-0.6 1,-0.1 2,-0.1 -0.533 91.5 80.9 117.8 175.9 29.1 38.7 9.8 71 71 A G S S- 0 0 62 -2,-0.2 -36,-0.3 -3,-0.1 -1,-0.1 -0.566 97.5 -2.2 85.5-166.7 30.1 41.4 12.3 72 72 A S - 0 0 104 1,-0.2 -2,-0.1 -2,-0.1 -38,-0.0 -0.456 56.9-156.5 -68.2 122.9 27.3 42.9 14.5 73 73 A P - 0 0 20 0, 0.0 3,-0.4 0, 0.0 -12,-0.2 0.612 27.8-144.3 -73.2 -15.8 23.8 41.6 13.8 74 74 A G - 0 0 46 1,-0.2 -12,-0.1 -14,-0.1 17,-0.0 -0.430 36.5 -72.9 80.8-168.1 22.1 44.6 15.2 75 75 A A S S+ 0 0 25 -14,-0.1 17,-1.4 -69,-0.1 18,-0.3 0.536 100.6 92.9-108.4 -6.7 18.7 44.0 17.0 76 76 A D E - E 0 91C 3 -15,-0.4 -15,-1.1 -3,-0.4 2,-0.3 -0.722 49.4-176.2 -97.4 144.9 16.4 43.2 14.1 77 77 A R E -DE 60 90C 7 13,-2.6 13,-3.1 -2,-0.3 2,-0.4 -0.996 23.2-145.0-142.6 144.9 15.5 39.8 12.7 78 78 A V E -DE 59 89C 0 -19,-3.4 -19,-1.9 -2,-0.3 2,-0.5 -0.852 21.0-154.0 -98.3 132.3 13.6 38.2 9.9 79 79 A V E +DE 58 88C 0 9,-2.5 8,-2.9 -2,-0.4 9,-1.5 -0.981 21.0 169.2-114.1 119.3 12.0 34.9 10.9 80 80 A F E -DE 57 86C 0 -23,-2.0 -23,-2.1 -2,-0.5 6,-0.2 -0.808 21.6-132.9-121.2 167.3 11.3 32.4 8.0 81 81 A N E > -D 56 0C 3 4,-1.9 3,-2.0 -2,-0.3 -25,-0.2 -0.483 38.1 -84.4-114.2-173.2 10.3 28.7 8.1 82 82 A E T 3 S+ 0 0 77 -27,-0.9 -26,-0.1 1,-0.3 -28,-0.1 0.735 128.4 54.0 -62.1 -24.7 11.4 25.5 6.3 83 83 A N T 3 S- 0 0 119 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.355 119.6-110.1 -87.8 0.2 9.2 26.4 3.3 84 84 A N < + 0 0 58 -3,-2.0 2,-0.4 1,-0.3 -2,-0.1 0.896 69.2 149.9 65.7 39.1 10.8 29.9 3.0 85 85 A Q - 0 0 78 -32,-0.1 -4,-1.9 0, 0.0 2,-0.4 -0.890 51.7-116.5-101.4 135.8 7.6 31.5 4.2 86 86 A L E +E 80 0C 54 -2,-0.4 -6,-0.3 -6,-0.2 3,-0.1 -0.634 31.3 178.8 -73.1 126.6 7.9 34.8 6.2 87 87 A A E - 0 0 18 -8,-2.9 -36,-0.3 -2,-0.4 2,-0.3 0.808 56.6 -63.0 -97.0 -38.1 6.7 34.3 9.8 88 88 A G E -E 79 0C 14 -9,-1.5 -9,-2.5 -38,-0.1 2,-0.5 -0.962 39.3 -97.3 169.3 176.7 7.4 37.9 11.0 89 89 A V E +E 78 0C 6 14,-0.3 14,-2.6 -2,-0.3 2,-0.3 -0.991 44.5 174.6-121.8 126.0 10.0 40.6 11.7 90 90 A I E -EF 77 102C 0 -13,-3.1 -13,-2.6 -2,-0.5 2,-0.3 -0.799 11.2-165.5-132.7 170.6 11.1 41.0 15.3 91 91 A T E -EF 76 101C 2 10,-2.4 10,-2.4 -2,-0.3 -15,-0.2 -0.978 33.2-137.7-153.9 154.2 13.6 43.0 17.4 92 92 A H S > S+ 0 0 34 -17,-1.4 3,-2.3 -2,-0.3 2,-0.3 0.528 76.8 114.1 -80.4 -10.1 15.4 43.2 20.8 93 93 A T T 3 S+ 0 0 57 -18,-0.3 -86,-0.1 1,-0.3 8,-0.1 -0.414 90.4 3.2 -66.1 118.4 14.6 47.0 20.5 94 94 A G T 3 S+ 0 0 81 1,-0.3 2,-0.4 -2,-0.3 -1,-0.3 0.551 110.1 106.0 87.2 -0.2 12.2 47.8 23.3 95 95 A A S < S- 0 0 18 -3,-2.3 -1,-0.3 4,-0.2 2,-0.3 -0.913 77.3-111.5-109.5 142.1 12.3 44.2 24.7 96 96 A S S > S- 0 0 100 -2,-0.4 3,-1.7 4,-0.1 2,-0.2 -0.520 75.3 -24.7 -83.6 141.3 14.2 43.7 28.0 97 97 A G T 3 S- 0 0 67 -2,-0.3 -2,-0.2 1,-0.3 0, 0.0 -0.480 127.6 -24.3 71.2-128.1 17.4 41.6 27.8 98 98 A N T 3 S+ 0 0 130 -2,-0.2 -1,-0.3 2,-0.1 -2,-0.1 0.047 105.0 121.9-104.8 19.2 17.5 39.2 24.9 99 99 A N < - 0 0 91 -3,-1.7 2,-0.3 -7,-0.1 -4,-0.2 -0.300 53.8-136.1 -74.8 167.0 13.7 39.1 24.6 100 100 A F - 0 0 18 -6,-0.1 2,-0.3 -2,-0.1 -8,-0.2 -0.909 15.2-167.6-124.6 154.1 12.1 40.1 21.3 101 101 A V E -F 91 0C 57 -10,-2.4 -10,-2.4 -2,-0.3 -8,-0.1 -0.896 35.6 -97.0-134.1 158.7 9.0 42.1 20.4 102 102 A E E -F 90 0C 60 -2,-0.3 2,-0.4 -12,-0.2 -12,-0.2 -0.445 32.0-120.5 -77.2 155.5 7.3 42.3 17.0 103 103 A b 0 0 14 -14,-2.6 -14,-0.3 -2,-0.1 -97,-0.3 -0.818 360.0 360.0 -92.4 134.4 8.1 45.1 14.5 104 104 A T 0 0 133 -99,-2.0 -98,-0.1 -2,-0.4 -1,-0.1 0.655 360.0 360.0 -85.8 360.0 5.0 47.1 13.6