==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE(ENDORIBONUCLEASE) 13-FEB-90 4RNT . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR W.SAENGER,G.KOELLNER . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5562.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 54.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 157 0, 0.0 2,-0.3 0, 0.0 9,-0.1 0.000 360.0 360.0 360.0-110.5 16.9 42.1 9.9 2 2 A a - 0 0 44 1,-0.1 10,-0.2 7,-0.1 3,-0.1 -0.998 360.0-148.5-133.5 128.9 14.3 39.4 10.8 3 3 A D S S+ 0 0 98 -2,-0.3 2,-0.4 1,-0.2 9,-0.2 0.976 97.3 15.9 -56.9 -53.8 11.4 37.7 8.9 4 4 A Y E S-A 11 0A 57 7,-3.3 7,-3.2 100,-0.1 2,-0.5 -0.974 70.6-161.7-124.2 140.0 9.5 37.4 12.1 5 5 A T E -A 10 0A 48 -2,-0.4 99,-2.0 5,-0.2 2,-0.8 -0.975 4.4-174.0-123.0 118.4 10.2 39.2 15.4 6 6 A b E > -A 9 0A 0 3,-1.9 3,-1.8 -2,-0.5 2,-0.8 -0.783 67.5 -63.7-112.0 82.8 8.7 37.8 18.7 7 7 A G T 3 S- 0 0 43 -2,-0.8 97,-0.1 1,-0.3 84,-0.0 -0.656 124.5 -10.2 76.2-110.9 9.4 40.3 21.3 8 8 A S T 3 S+ 0 0 119 -2,-0.8 -1,-0.3 -3,-0.1 2,-0.1 0.692 116.5 98.3 -94.0 -24.0 13.2 40.1 21.3 9 9 A N E < -A 6 0A 50 -3,-1.8 -3,-1.9 1,-0.0 2,-0.5 -0.289 55.9-154.2 -74.5 143.5 13.6 37.1 19.1 10 10 A a E -A 5 0A 69 -5,-0.3 2,-0.4 -2,-0.1 -5,-0.2 -0.949 14.9-177.4-113.1 107.6 14.3 37.1 15.4 11 11 A Y E -A 4 0A 6 -7,-3.2 -7,-3.3 -2,-0.5 2,-0.3 -0.939 14.7-148.2-122.4 139.8 13.3 34.3 13.3 12 12 A S >> - 0 0 41 -2,-0.4 4,-1.7 -9,-0.2 3,-1.3 -0.706 38.4-101.6 -97.9 158.3 13.8 33.6 9.6 13 13 A S H 3> S+ 0 0 60 1,-0.3 4,-1.9 -2,-0.3 5,-0.1 0.720 124.7 58.5 -54.9 -21.6 11.3 31.7 7.4 14 14 A S H 3> S+ 0 0 76 2,-0.2 4,-2.8 1,-0.2 -1,-0.3 0.879 102.9 51.1 -73.7 -36.4 13.7 28.7 7.8 15 15 A D H <> S+ 0 0 65 -3,-1.3 4,-2.5 1,-0.2 -2,-0.2 0.949 112.7 46.1 -61.9 -49.3 13.4 28.9 11.5 16 16 A V H X S+ 0 0 3 -4,-1.7 4,-2.2 2,-0.2 -2,-0.2 0.820 114.4 47.1 -62.8 -43.0 9.6 28.9 11.1 17 17 A S H X S+ 0 0 68 -4,-1.9 4,-2.6 -5,-0.2 5,-0.2 0.878 109.9 52.0 -75.4 -36.3 9.6 26.0 8.6 18 18 A T H X S+ 0 0 81 -4,-2.8 4,-1.4 1,-0.2 -2,-0.2 0.915 116.3 42.6 -64.4 -46.4 12.0 23.9 10.7 19 19 A A H X S+ 0 0 7 -4,-2.5 4,-1.3 -5,-0.2 -2,-0.2 0.867 114.8 49.4 -65.0 -40.5 9.6 24.4 13.6 20 20 A Q H X S+ 0 0 22 -4,-2.2 4,-3.1 1,-0.2 -2,-0.2 0.931 108.7 51.4 -67.3 -46.8 6.4 23.9 11.6 21 21 A A H X S+ 0 0 57 -4,-2.6 4,-2.9 2,-0.2 -1,-0.2 0.854 114.5 43.2 -58.9 -45.4 7.5 20.6 9.9 22 22 A A H X S+ 0 0 8 -4,-1.4 4,-1.7 2,-0.2 -1,-0.2 0.837 115.1 50.7 -55.8 -43.7 8.4 19.0 13.3 23 23 A G H X S+ 0 0 0 -4,-1.3 4,-1.5 2,-0.2 -2,-0.2 0.964 115.2 41.5 -61.1 -68.1 5.3 20.3 14.8 24 24 A Y H X S+ 0 0 47 -4,-3.1 4,-2.8 1,-0.2 5,-0.3 0.820 106.3 61.7 -63.3 -37.4 3.2 18.9 12.1 25 25 A K H X S+ 0 0 95 -4,-2.9 4,-1.1 1,-0.2 -1,-0.2 0.900 107.6 45.7 -61.2 -41.4 5.0 15.6 11.8 26 26 A L H <>S+ 0 0 23 -4,-1.7 5,-2.3 1,-0.2 4,-0.3 0.894 109.1 54.4 -65.9 -46.8 4.1 14.7 15.4 27 27 A H H ><5S+ 0 0 51 -4,-1.5 3,-1.5 1,-0.2 -2,-0.2 0.924 111.9 44.4 -54.7 -49.2 0.5 15.8 14.9 28 28 A E H 3<5S+ 0 0 117 -4,-2.8 -1,-0.2 1,-0.3 -2,-0.2 0.695 112.7 53.9 -66.4 -17.8 0.1 13.5 11.9 29 29 A D T 3<5S- 0 0 81 -4,-1.1 -1,-0.3 -3,-0.3 -2,-0.2 0.388 112.1-119.5 -95.1 0.1 1.9 10.7 13.9 30 30 A G T < 5S+ 0 0 78 -3,-1.5 2,-0.2 -4,-0.3 -3,-0.2 0.766 73.4 124.5 60.1 31.7 -0.5 11.0 16.9 31 31 A E < - 0 0 107 -5,-2.3 2,-0.3 -6,-0.1 -1,-0.2 -0.721 39.8-171.1-120.2 168.4 2.3 11.9 19.1 32 32 A T - 0 0 70 -2,-0.2 2,-0.4 -3,-0.1 5,-0.1 -0.929 12.8-135.4-151.2 164.0 3.4 14.6 21.5 33 33 A V B > -B 38 0B 32 5,-1.8 5,-2.2 -2,-0.3 37,-0.2 -0.974 53.3 -1.7-135.9 142.1 6.2 16.0 23.5 34 34 A G T > 5S- 0 0 32 -2,-0.4 3,-2.3 35,-0.3 36,-0.1 0.324 90.4 -53.8 80.4 170.4 6.6 17.3 27.1 35 35 A S T 3 5S+ 0 0 124 1,-0.3 -1,-0.1 2,-0.1 35,-0.0 0.667 136.1 40.4 -50.5 -32.8 4.4 18.0 30.2 36 36 A N T 3 5S- 0 0 93 -3,-0.2 -1,-0.3 4,-0.0 -2,-0.1 0.174 110.3-126.4-105.9 13.5 1.9 20.1 28.3 37 37 A S T < 5 - 0 0 57 -3,-2.3 -3,-0.2 1,-0.1 -2,-0.1 0.945 33.7-126.3 38.7 87.2 1.9 17.8 25.3 38 38 A Y B - 0 0 33 4,-0.7 3,-1.9 -2,-0.4 12,-0.1 -0.807 18.7-149.7-106.3 138.4 12.8 28.3 20.1 63 63 A S T 3 S+ 0 0 87 -2,-0.4 -53,-0.1 1,-0.3 -1,-0.1 0.608 99.3 65.2 -63.5 -18.3 15.2 31.2 20.2 64 64 A S T 3 S- 0 0 82 2,-0.2 -1,-0.3 1,-0.0 3,-0.1 0.663 112.5-117.2 -76.5 -23.5 18.1 28.9 20.6 65 65 A G S < S+ 0 0 55 -3,-1.9 2,-0.2 1,-0.4 -2,-0.1 0.524 74.2 129.7 95.6 4.6 17.4 27.5 17.1 66 66 A D - 0 0 117 1,-0.0 -4,-0.7 -47,-0.0 2,-0.5 -0.650 64.8-115.7 -92.8 157.0 16.7 24.0 18.6 67 67 A V - 0 0 65 -2,-0.2 -6,-0.1 -6,-0.1 -48,-0.0 -0.805 43.7 -99.9 -88.1 127.5 13.5 22.1 17.7 68 68 A Y + 0 0 9 -8,-0.5 3,-0.1 -2,-0.5 -1,-0.0 -0.360 49.1 164.1 -56.1 129.2 11.3 21.6 20.8 69 69 A S - 0 0 99 1,-0.7 -35,-0.3 -3,-0.0 2,-0.2 -0.104 63.1 -58.9-134.1 21.5 11.7 18.2 22.4 70 70 A G S S+ 0 0 25 -37,-0.2 -1,-0.7 1,-0.1 2,-0.2 -0.382 96.0 69.0 114.2 165.8 10.1 18.6 25.9 71 71 A G S S+ 0 0 47 -2,-0.2 -1,-0.1 -3,-0.1 -36,-0.1 -0.591 93.0 14.6 92.8-162.0 11.1 21.0 28.7 72 72 A S - 0 0 106 -2,-0.2 -2,-0.1 1,-0.1 -38,-0.0 -0.355 61.5-160.1 -53.3 114.5 10.8 24.7 28.8 73 73 A P - 0 0 40 0, 0.0 -12,-0.3 0, 0.0 3,-0.2 0.739 24.8-145.0 -68.7 -26.7 8.3 25.7 26.0 74 74 A G - 0 0 37 1,-0.2 -12,-0.1 -14,-0.1 -3,-0.0 -0.302 27.5 -82.0 85.5 174.3 9.4 29.3 25.8 75 75 A A S S+ 0 0 33 -69,-0.1 17,-2.7 -14,-0.1 2,-0.3 0.565 100.4 78.6 -98.3 -9.4 7.0 32.2 25.0 76 76 A D E - E 0 91C 2 -15,-0.4 -15,-1.4 15,-0.3 2,-0.3 -0.736 55.7-177.1 -96.4 144.9 6.8 32.0 21.2 77 77 A R E -DE 60 90C 20 13,-3.6 13,-1.4 -2,-0.3 2,-0.3 -0.936 24.8-132.1-142.4 166.2 4.8 29.5 19.1 78 78 A V E -DE 59 89C 0 -19,-2.8 -19,-1.8 -2,-0.3 2,-0.4 -0.866 23.5-151.7-110.6 146.2 4.2 28.5 15.5 79 79 A V E +DE 58 88C 0 9,-1.4 8,-2.9 -2,-0.3 9,-1.1 -0.980 22.6 165.4-125.7 124.5 0.5 28.1 14.5 80 80 A F E -DE 57 86C 0 -23,-1.9 -23,-2.9 -2,-0.4 6,-0.2 -0.958 22.6-141.9-136.5 155.1 -0.4 25.7 11.7 81 81 A N E > -D 56 0C 0 4,-1.8 3,-1.1 -2,-0.3 -25,-0.2 -0.277 44.0 -79.5-100.3-162.4 -3.7 24.1 10.5 82 82 A E T 3 S+ 0 0 73 -27,-0.7 -26,-0.1 1,-0.3 -28,-0.1 0.660 127.1 54.8 -74.8 -20.2 -4.4 20.6 9.2 83 83 A N T 3 S- 0 0 100 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.212 118.5-110.8 -92.3 1.7 -3.1 21.2 5.7 84 84 A N < + 0 0 59 -3,-1.1 2,-0.4 1,-0.3 -2,-0.2 0.895 65.7 155.9 64.0 47.9 0.2 22.3 7.3 85 85 A Q - 0 0 86 -32,-0.1 -4,-1.8 -65,-0.0 2,-0.4 -0.878 49.7-116.2-100.0 135.2 -0.5 25.8 6.2 86 86 A L E -E 80 0C 54 -2,-0.4 -6,-0.3 -6,-0.2 3,-0.1 -0.633 31.1-178.2 -64.4 118.2 1.3 28.4 8.4 87 87 A A E - 0 0 19 -8,-2.9 2,-0.3 -2,-0.4 -36,-0.3 0.852 56.5 -69.7 -82.7 -41.7 -1.5 30.5 10.2 88 88 A G E -E 79 0C 9 -9,-1.1 -9,-1.4 -38,-0.1 2,-0.6 -0.937 39.6 -87.5 166.7 173.3 1.1 32.8 11.9 89 89 A V E +E 78 0C 4 -2,-0.3 14,-3.7 14,-0.2 2,-0.3 -0.893 45.6 176.7-109.9 118.7 3.8 33.3 14.4 90 90 A I E -EF 77 102C 0 -13,-1.4 -13,-3.6 -2,-0.6 2,-0.3 -0.790 11.5-166.4-118.2 158.8 2.6 34.3 18.0 91 91 A T E -EF 76 101C 1 10,-2.3 10,-2.4 -15,-0.3 -15,-0.3 -0.994 30.6-139.0-144.0 148.9 4.3 35.0 21.3 92 92 A A S > S+ 0 0 44 -17,-2.7 3,-1.7 -2,-0.3 2,-0.5 0.655 78.1 112.1 -77.2 -19.4 3.1 35.4 24.9 93 93 A T T 3 S+ 0 0 63 1,-0.3 -86,-0.2 -18,-0.3 -2,-0.1 -0.344 83.4 6.4 -66.8 107.6 5.7 38.3 24.9 94 94 A G T 3 S+ 0 0 71 -2,-0.5 -1,-0.3 1,-0.3 2,-0.2 0.678 100.5 111.4 92.2 15.2 4.0 41.6 25.2 95 95 A A S < S- 0 0 28 -3,-1.7 2,-1.0 4,-0.3 -1,-0.3 -0.733 72.5 -98.1-112.5 168.5 0.3 40.7 25.8 96 96 A S S S- 0 0 100 -2,-0.2 2,-0.6 4,-0.2 3,-0.4 -0.613 81.7 -46.2 -87.0 91.8 -2.1 41.0 28.9 97 97 A G S S- 0 0 78 -2,-1.0 -2,-0.2 1,-0.2 0, 0.0 -0.877 128.4 -7.4 101.4-118.6 -2.4 37.6 30.8 98 98 A N S S+ 0 0 129 -2,-0.6 -1,-0.2 2,-0.1 -2,-0.1 0.244 103.5 124.8 -89.9 -2.4 -2.8 34.5 28.5 99 99 A N - 0 0 71 -3,-0.4 2,-0.4 -7,-0.1 -4,-0.3 -0.065 50.9-154.0 -61.8 157.3 -3.3 36.9 25.6 100 100 A F - 0 0 27 -6,-0.1 2,-0.4 -4,-0.1 -8,-0.2 -0.934 4.6-150.9-122.7 155.8 -0.7 36.1 22.7 101 101 A V E -F 91 0C 53 -10,-2.4 -10,-2.3 -2,-0.4 2,-0.2 -0.883 25.5-104.5-130.6 149.3 0.2 38.9 20.5 102 102 A E E -F 90 0C 85 -2,-0.4 -12,-0.3 -12,-0.2 2,-0.1 -0.610 33.3-116.5 -80.1 148.3 1.2 38.2 17.0 103 103 A b 0 0 12 -14,-3.7 -97,-0.2 -2,-0.2 -14,-0.2 -0.462 360.0 360.0 -76.2 156.7 5.0 38.4 16.1 104 104 A T 0 0 137 -99,-2.0 -98,-0.1 -2,-0.1 -1,-0.1 0.664 360.0 360.0 -90.5 360.0 5.9 41.2 13.6