==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE(ENDORIBONUCLEASE) 28-MAR-91 5RNT . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR W.SAENGER,U.HEINEMANN,A.LENZ . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5739.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 22.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 4 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 150 0, 0.0 2,-0.5 0, 0.0 9,-0.0 0.000 360.0 360.0 360.0 153.6 36.0 40.8 26.3 2 2 A a - 0 0 40 10,-0.1 10,-0.3 1,-0.1 3,-0.0 -0.932 360.0-130.8-106.7 125.2 37.0 37.5 24.5 3 3 A D S S+ 0 0 94 -2,-0.5 2,-0.3 1,-0.1 9,-0.2 0.741 91.7 22.1 -55.8 -26.3 40.7 37.0 24.2 4 4 A Y E -A 11 0A 58 7,-2.0 7,-2.1 2,-0.0 2,-0.5 -0.997 66.7-159.7-145.9 137.0 40.3 36.2 20.4 5 5 A T E -A 10 0A 49 -2,-0.3 99,-0.9 5,-0.2 2,-0.7 -0.970 8.9-177.7-130.0 125.5 37.6 37.0 17.8 6 6 A b E > S-A 9 0A 3 3,-2.3 3,-3.3 -2,-0.5 2,-1.2 -0.934 74.2 -62.2-117.6 95.6 37.1 35.2 14.6 7 7 A G T 3 S- 0 0 54 -2,-0.7 87,-0.0 1,-0.3 84,-0.0 -0.376 122.8 -16.0 63.1 -96.6 34.2 37.1 13.0 8 8 A S T 3 S+ 0 0 117 -2,-1.2 2,-1.1 -3,-0.1 -1,-0.3 0.328 112.0 105.7-118.2 1.1 31.5 36.4 15.6 9 9 A N E < -A 6 0A 57 -3,-3.3 -3,-2.3 2,-0.0 2,-0.4 -0.725 53.1-170.5 -93.8 101.9 33.3 33.6 17.4 10 10 A a E -A 5 0A 71 -2,-1.1 2,-0.3 -5,-0.2 -5,-0.2 -0.808 6.5-179.6 -95.6 133.8 34.5 35.1 20.6 11 11 A Y E -A 4 0A 4 -7,-2.1 -7,-2.0 -2,-0.4 2,-0.1 -0.973 22.3-137.1-146.2 128.2 36.8 33.0 22.7 12 12 A S > - 0 0 36 -2,-0.3 4,-1.8 -10,-0.3 3,-0.2 -0.419 32.8-112.4 -75.2 157.8 38.6 33.5 26.0 13 13 A S H > S+ 0 0 52 1,-0.2 4,-2.9 2,-0.2 -1,-0.1 0.866 117.6 63.3 -62.9 -37.0 42.2 32.4 26.2 14 14 A S H > S+ 0 0 72 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.939 103.6 48.4 -52.5 -48.2 41.1 29.7 28.7 15 15 A D H 4 S+ 0 0 65 1,-0.3 4,-0.5 2,-0.2 -1,-0.2 0.924 110.4 52.2 -53.1 -51.3 39.0 28.2 25.9 16 16 A V H >X S+ 0 0 2 -4,-1.8 4,-1.9 1,-0.2 3,-1.1 0.859 105.5 55.5 -55.5 -45.0 42.1 28.5 23.7 17 17 A S H 3X S+ 0 0 72 -4,-2.9 4,-2.3 1,-0.2 -1,-0.2 0.874 106.7 48.5 -54.1 -52.5 44.2 26.7 26.4 18 18 A T H 3< S+ 0 0 90 -4,-1.8 -1,-0.2 2,-0.2 4,-0.2 0.351 110.9 51.7 -69.6 -4.0 41.9 23.6 26.4 19 19 A A H <> S+ 0 0 8 -3,-1.1 4,-2.1 -4,-0.5 -1,-0.2 0.867 113.7 38.4 -98.0 -53.6 41.8 23.2 22.7 20 20 A Q H X S+ 0 0 16 -4,-1.9 4,-1.3 1,-0.2 5,-0.2 0.892 115.7 55.5 -67.1 -41.8 45.5 23.3 21.9 21 21 A A H X S+ 0 0 49 -4,-2.3 4,-1.6 -5,-0.3 3,-0.2 0.893 110.6 45.2 -51.0 -47.6 46.2 21.2 25.0 22 22 A A H > S+ 0 0 27 1,-0.2 4,-1.9 2,-0.2 3,-0.4 0.968 113.7 47.9 -57.6 -60.0 43.8 18.5 23.9 23 23 A G H < S+ 0 0 0 -4,-2.1 4,-0.4 1,-0.3 -1,-0.2 0.612 109.5 55.0 -60.4 -21.2 45.1 18.5 20.3 24 24 A Y H X S+ 0 0 42 -4,-1.3 4,-2.8 -3,-0.2 -1,-0.3 0.719 102.9 53.8 -89.0 -32.9 48.7 18.3 21.6 25 25 A K H X S+ 0 0 107 -4,-1.6 4,-2.3 -3,-0.4 -2,-0.2 0.937 111.9 46.1 -66.6 -41.1 48.0 15.2 23.7 26 26 A L H X>S+ 0 0 35 -4,-1.9 5,-1.1 1,-0.2 4,-0.7 0.774 111.5 52.1 -67.5 -29.0 46.6 13.5 20.5 27 27 A H H >45S+ 0 0 43 -4,-0.4 3,-0.5 -5,-0.2 -1,-0.2 0.913 108.9 51.3 -73.0 -39.2 49.7 14.9 18.7 28 28 A E H 3<5S+ 0 0 123 -4,-2.8 -2,-0.2 1,-0.2 -3,-0.2 0.971 110.1 46.3 -58.5 -61.1 51.9 13.3 21.5 29 29 A D H 3<5S- 0 0 68 -4,-2.3 -1,-0.2 1,-0.1 -2,-0.2 0.600 109.7-126.6 -56.0 -17.8 50.2 9.8 21.2 30 30 A G T <<5 + 0 0 67 -4,-0.7 -3,-0.2 -3,-0.5 2,-0.2 0.562 61.5 143.1 77.4 13.5 50.6 10.1 17.4 31 31 A E < - 0 0 106 -5,-1.1 2,-0.4 -6,-0.2 -1,-0.3 -0.518 37.8-150.3 -83.7 153.2 47.0 9.4 16.9 32 32 A T - 0 0 85 -2,-0.2 2,-0.3 -3,-0.1 5,-0.1 -0.982 10.5-173.9-133.9 141.4 44.7 11.0 14.3 33 33 A V B > +B 38 0B 40 5,-1.5 5,-2.5 -2,-0.4 37,-0.2 -0.999 39.9 40.5-127.7 123.1 40.9 11.8 14.4 34 34 A G T 5S- 0 0 28 3,-0.3 3,-0.3 -2,-0.3 38,-0.1 -0.528 80.9 -88.8 123.1 162.9 38.5 13.2 11.7 35 35 A S T 5S+ 0 0 116 36,-0.4 -1,-0.1 1,-0.2 37,-0.1 0.870 141.3 35.1 -70.8 -44.2 37.6 12.9 8.1 36 36 A N T 5S- 0 0 99 -3,-0.1 -1,-0.2 2,-0.0 -2,-0.1 0.024 118.3-134.7 -95.0 21.5 40.2 15.7 7.7 37 37 A S T 5 - 0 0 40 -3,-0.3 -3,-0.3 1,-0.1 -2,-0.1 0.668 24.2-127.6 14.2 90.5 42.0 13.9 10.5 38 38 A Y B - 0 0 41 4,-0.7 3,-1.3 -2,-0.5 12,-0.1 -0.788 13.4-140.4 -95.6 135.9 34.6 24.7 18.5 63 63 A S T 3 S+ 0 0 67 -2,-0.4 -1,-0.1 1,-0.3 -53,-0.1 0.450 94.9 76.1 -71.2 -6.6 32.6 27.8 19.7 64 64 A S T 3 S- 0 0 98 2,-0.2 -1,-0.3 1,-0.0 3,-0.1 0.632 111.8-111.1 -81.8 -12.7 30.3 25.5 21.8 65 65 A G S < S+ 0 0 47 -3,-1.3 2,-0.2 1,-0.4 -2,-0.1 0.053 81.7 111.4 102.2 -25.1 33.1 25.1 24.4 66 66 A D - 0 0 119 1,-0.1 -4,-0.7 -5,-0.0 -1,-0.4 -0.431 68.0-109.1 -88.8 164.8 33.8 21.5 23.8 67 67 A V B -H 61 0E 54 -2,-0.2 2,-0.3 1,-0.1 -1,-0.1 -0.266 41.9 -87.2 -77.9 159.6 36.9 20.0 22.3 68 68 A Y + 0 0 8 -8,-0.5 -1,-0.1 -49,-0.1 3,-0.1 -0.631 49.3 167.8 -75.6 133.7 37.2 18.4 18.8 69 69 A S - 0 0 105 1,-1.0 3,-0.1 -2,-0.3 -1,-0.1 -0.530 62.6 -67.6-147.6 61.7 36.2 14.8 19.3 70 70 A G S S+ 0 0 25 -37,-0.2 -1,-1.0 1,-0.2 2,-0.3 -0.068 104.8 59.2 72.7-176.8 35.9 13.8 15.6 71 71 A G S S+ 0 0 56 -3,-0.1 -36,-0.4 2,-0.0 -1,-0.2 -0.450 93.4 31.6 73.0-123.5 33.1 15.1 13.3 72 72 A S - 0 0 81 -2,-0.3 -3,-0.1 1,-0.1 3,-0.1 -0.650 42.9-174.8 -84.4 116.2 32.8 18.8 12.6 73 73 A P - 0 0 27 0, 0.0 2,-0.4 0, 0.0 -12,-0.3 0.647 26.3-159.2 -78.7 -16.2 35.8 21.1 12.6 74 74 A G - 0 0 52 1,-0.2 -12,-0.1 -14,-0.1 3,-0.0 -0.669 41.9 -79.9 69.3-121.4 33.5 24.0 12.2 75 75 A A S S+ 0 0 31 -2,-0.4 17,-1.7 -14,-0.3 -1,-0.2 0.438 98.8 84.6-151.9 -16.9 35.9 26.7 10.7 76 76 A D E - F 0 91D 5 -15,-0.4 -15,-0.7 -3,-0.3 2,-0.3 -0.399 56.6-170.3 -87.2 169.6 38.1 28.4 13.4 77 77 A R E -EF 60 90D 14 13,-1.2 13,-2.2 -17,-0.2 2,-0.4 -0.962 24.8-137.6-173.1 150.6 41.4 26.8 14.7 78 78 A V E - F 0 89D 0 -19,-2.8 -19,-0.5 -2,-0.3 2,-0.5 -0.872 18.1-157.4-103.9 135.8 44.3 26.8 17.1 79 79 A V E + F 0 88D 1 9,-1.9 8,-2.8 -2,-0.4 9,-1.5 -0.978 17.1 166.5-131.5 120.1 47.9 26.2 16.0 80 80 A F B -D 57 0C 0 -23,-1.0 -23,-1.7 -2,-0.5 2,-0.2 -0.227 22.0-139.6-104.4-168.3 50.6 24.9 18.4 81 81 A N > - 0 0 2 4,-0.4 3,-1.0 -25,-0.3 -25,-0.2 -0.723 43.2 -68.1-144.3-166.8 54.0 23.6 17.5 82 82 A E T 3 S+ 0 0 76 -29,-0.4 2,-0.2 -27,-0.3 -28,-0.1 0.787 131.2 47.4 -68.5 -30.6 56.2 20.8 18.6 83 83 A N T 3 S- 0 0 116 2,-0.1 -1,-0.3 1,-0.0 3,-0.1 -0.366 115.5-109.7-108.3 52.3 56.8 22.3 22.0 84 84 A N < + 0 0 62 -3,-1.0 2,-0.2 -2,-0.2 -2,-0.1 0.630 69.8 147.2 35.8 28.1 53.1 23.1 22.7 85 85 A Q - 0 0 78 -32,-0.1 2,-0.6 1,-0.1 -4,-0.4 -0.643 53.7-110.8 -83.1 143.0 53.9 26.8 22.4 86 86 A L + 0 0 54 -2,-0.2 -6,-0.2 -6,-0.2 -34,-0.2 -0.694 35.9 174.4 -91.9 125.0 50.9 28.8 20.9 87 87 A A - 0 0 15 -8,-2.8 2,-0.3 -2,-0.6 -36,-0.2 0.783 55.4 -80.9 -94.1 -32.2 51.4 30.2 17.4 88 88 A G E -F 79 0D 10 -9,-1.5 -9,-1.9 -38,-0.1 2,-0.4 -0.984 29.2 -78.1 162.8-173.9 47.8 31.5 17.0 89 89 A V E +F 78 0D 3 -2,-0.3 14,-2.9 -11,-0.2 2,-0.3 -0.898 45.7 177.8-128.8 96.2 44.1 31.5 16.3 90 90 A I E -FG 77 102D 3 -13,-2.2 -13,-1.2 -2,-0.4 2,-0.3 -0.808 6.7-164.1-108.7 153.6 43.3 31.4 12.6 91 91 A T E -FG 76 101D 3 10,-2.8 10,-1.2 -2,-0.3 4,-0.3 -0.986 30.7-148.3-140.7 135.8 39.9 31.3 10.8 92 92 A H S > S+ 0 0 47 -17,-1.7 3,-3.1 -2,-0.3 7,-0.2 0.944 77.2 104.3 -53.3 -46.1 38.3 30.6 7.4 93 93 A T T 3 S+ 0 0 72 1,-0.3 -86,-0.2 -18,-0.1 8,-0.2 -0.162 89.7 9.4 -46.6 110.8 35.7 33.1 8.3 94 94 A G T 3 S+ 0 0 79 1,-0.4 -1,-0.3 -88,-0.1 2,-0.2 0.108 109.2 89.0 100.7 -18.5 36.4 36.3 6.4 95 95 A A S < S- 0 0 32 -3,-3.1 -1,-0.4 -4,-0.3 2,-0.3 -0.645 75.8-106.1-106.1 169.4 39.1 35.2 4.0 96 96 A S S S- 0 0 105 -2,-0.2 2,-0.7 4,-0.1 4,-0.1 -0.715 76.1 -4.5-100.6 149.7 38.7 33.7 0.6 97 97 A G S S- 0 0 65 -2,-0.3 -2,-0.1 1,-0.2 -5,-0.0 -0.742 130.4 -30.2 85.4-113.5 39.1 30.1 -0.7 98 98 A N S S+ 0 0 134 -2,-0.7 -1,-0.2 2,-0.1 -2,-0.1 -0.404 103.9 140.4-130.4 43.9 40.4 27.9 2.1 99 99 A N - 0 0 77 -7,-0.2 2,-0.3 -3,-0.1 -4,-0.2 -0.301 40.3-150.1 -85.3 176.9 42.2 30.9 3.6 100 100 A F - 0 0 12 -6,-0.1 2,-0.3 -4,-0.1 -8,-0.2 -0.946 3.7-160.3-145.0 146.6 42.5 31.6 7.3 101 101 A V E -G 91 0D 55 -10,-1.2 -10,-2.8 -2,-0.3 -6,-0.1 -0.930 34.8 -99.5-128.5 148.3 42.8 35.0 8.8 102 102 A E E -G 90 0D 129 -2,-0.3 2,-0.7 -12,-0.2 -12,-0.3 -0.437 39.7-113.9 -67.9 152.1 44.2 35.5 12.4 103 103 A b 0 0 2 -14,-2.9 -97,-0.3 1,-0.1 -14,-0.1 -0.849 360.0 360.0 -92.8 111.3 41.5 36.0 15.0 104 104 A T 0 0 134 -99,-0.9 -1,-0.1 -2,-0.7 -98,-0.1 0.827 360.0 360.0 -41.2 360.0 41.7 39.6 16.4