==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE(ENDORIBONUCLEASE) 20-AUG-91 7RNT . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR G.KOELLNER,H.-P.GRUNERT,O.LANDT,W.SAENGER . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5456.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 58.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 26.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 8.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 149 0, 0.0 2,-0.4 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 148.9 6.3 -4.7 15.1 2 2 A a - 0 0 47 1,-0.1 10,-0.2 10,-0.1 3,-0.2 -0.767 360.0-158.8 -95.7 141.1 7.7 -1.6 13.4 3 3 A D S S+ 0 0 87 8,-2.3 2,-0.3 -2,-0.4 9,-0.2 0.801 92.5 16.7 -81.0 -31.2 6.3 1.9 14.0 4 4 A Y E S-A 11 0A 61 7,-2.0 7,-2.7 -3,-0.1 2,-0.5 -0.994 70.3-161.2-141.4 130.9 8.1 2.9 10.7 5 5 A T E -A 10 0A 47 -2,-0.3 99,-2.1 5,-0.2 2,-0.8 -0.964 3.6-172.1-118.9 117.2 9.4 0.6 8.0 6 6 A b E > -A 9 0A 1 3,-2.2 3,-2.5 -2,-0.5 2,-0.9 -0.838 68.7 -60.0-109.8 91.2 12.0 2.0 5.6 7 7 A G T 3 S- 0 0 49 -2,-0.8 97,-0.1 1,-0.3 84,-0.0 -0.610 123.1 -19.4 72.0-107.7 12.4 -0.6 3.0 8 8 A S T 3 S+ 0 0 113 -2,-0.9 -1,-0.3 -3,-0.1 2,-0.3 0.454 115.4 108.9-108.7 -1.9 13.7 -3.4 5.2 9 9 A N E < -A 6 0A 48 -3,-2.5 -3,-2.2 1,-0.0 2,-0.5 -0.560 56.0-152.1 -78.9 136.5 14.7 -1.1 8.1 10 10 A a E -A 5 0A 68 -2,-0.3 2,-0.4 -5,-0.2 -5,-0.2 -0.948 14.9-177.6-113.5 125.3 12.5 -1.3 11.2 11 11 A Y E -A 4 0A 2 -7,-2.7 -8,-2.3 -2,-0.5 -7,-2.0 -0.963 14.2-151.3-128.1 143.2 12.1 1.6 13.5 12 12 A S >> - 0 0 34 -2,-0.4 4,-1.8 -10,-0.2 3,-0.6 -0.622 36.4-106.7-100.8 164.5 10.3 2.2 16.8 13 13 A S H 3> S+ 0 0 59 1,-0.3 4,-3.0 -2,-0.2 5,-0.2 0.892 121.7 58.1 -56.3 -40.3 8.9 5.5 17.9 14 14 A S H 3> S+ 0 0 76 1,-0.2 4,-1.9 2,-0.2 -1,-0.3 0.845 104.1 51.5 -58.5 -36.4 11.8 5.6 20.5 15 15 A D H <> S+ 0 0 50 -3,-0.6 4,-1.9 2,-0.2 -1,-0.2 0.906 110.7 47.9 -67.5 -41.8 14.3 5.3 17.7 16 16 A V H X S+ 0 0 4 -4,-1.8 4,-2.9 1,-0.2 -2,-0.2 0.938 110.5 52.1 -63.1 -48.0 12.6 8.2 15.8 17 17 A S H X S+ 0 0 74 -4,-3.0 4,-2.1 1,-0.2 -2,-0.2 0.881 109.6 48.3 -56.6 -43.1 12.5 10.3 19.0 18 18 A T H X S+ 0 0 77 -4,-1.9 4,-1.6 2,-0.2 -1,-0.2 0.930 113.1 46.6 -65.2 -45.7 16.2 9.9 19.7 19 19 A A H X S+ 0 0 7 -4,-1.9 4,-2.5 2,-0.2 5,-0.2 0.917 112.2 51.7 -61.5 -46.6 17.3 10.7 16.1 20 20 A Q H X S+ 0 0 21 -4,-2.9 4,-3.0 1,-0.2 5,-0.2 0.917 107.9 51.4 -56.8 -46.9 15.0 13.7 16.1 21 21 A A H X S+ 0 0 61 -4,-2.1 4,-1.6 -5,-0.2 -1,-0.2 0.842 110.7 47.6 -61.6 -36.5 16.4 15.1 19.3 22 22 A A H X S+ 0 0 27 -4,-1.6 4,-1.8 2,-0.2 -1,-0.2 0.946 114.1 47.0 -70.2 -46.1 20.0 14.8 18.1 23 23 A G H X S+ 0 0 0 -4,-2.5 4,-2.1 1,-0.2 -2,-0.2 0.909 111.6 50.6 -60.3 -45.9 19.2 16.4 14.8 24 24 A Y H X S+ 0 0 38 -4,-3.0 4,-2.4 -5,-0.2 -1,-0.2 0.885 107.1 54.0 -62.5 -38.4 17.3 19.3 16.4 25 25 A K H X S+ 0 0 56 -4,-1.6 4,-1.9 2,-0.2 -1,-0.2 0.903 109.3 47.3 -61.6 -44.8 20.0 20.1 18.9 26 26 A L H <>S+ 0 0 33 -4,-1.8 5,-2.9 2,-0.2 4,-0.3 0.897 110.6 53.9 -63.8 -39.8 22.6 20.4 16.1 27 27 A H H ><5S+ 0 0 42 -4,-2.1 3,-1.5 1,-0.2 -2,-0.2 0.922 108.4 48.0 -58.4 -47.8 20.1 22.6 14.3 28 28 A E H 3<5S+ 0 0 129 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.862 111.9 51.3 -59.2 -40.8 19.7 24.9 17.3 29 29 A D T 3<5S- 0 0 107 -4,-1.9 -1,-0.3 -5,-0.2 -2,-0.2 0.420 110.8-120.9 -79.6 0.2 23.5 25.1 17.6 30 30 A G T < 5S+ 0 0 69 -3,-1.5 2,-0.3 -4,-0.3 -3,-0.2 0.877 70.1 136.1 60.0 37.6 24.0 26.0 14.0 31 31 A E < - 0 0 108 -5,-2.9 2,-0.3 -6,-0.1 -1,-0.2 -0.837 36.3-168.8-119.8 155.9 26.1 22.9 13.7 32 32 A T - 0 0 61 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.959 4.1-159.1-140.1 157.6 26.4 20.1 11.1 33 33 A V B > +B 38 0B 41 5,-2.6 5,-3.0 -2,-0.3 37,-0.2 -0.964 49.8 33.0-136.6 152.7 28.0 16.7 10.9 34 34 A G T > 5S- 0 0 27 -2,-0.3 3,-1.9 35,-0.2 38,-0.1 0.115 91.4 -76.6 87.1 158.4 29.0 14.5 8.0 35 35 A S T 3 5S+ 0 0 114 1,-0.3 -1,-0.2 36,-0.2 37,-0.1 0.816 133.1 50.7 -60.9 -30.5 30.3 15.2 4.5 36 36 A N T 3 5S- 0 0 91 -3,-0.1 -1,-0.3 4,-0.0 -2,-0.1 0.203 113.4-121.2 -92.4 13.2 26.7 16.1 3.4 37 37 A S T < 5 - 0 0 57 -3,-1.9 -3,-0.2 1,-0.1 -2,-0.1 0.937 37.9-130.0 46.6 75.7 26.3 18.4 6.4 38 38 A Y B + 0 0 45 -2,-0.5 3,-1.5 1,-0.2 6,-0.1 -0.181 47.9 138.6 -83.6 51.2 8.9 18.9 -0.1 45 45 A W T 3 + 0 0 180 -2,-1.3 -1,-0.2 1,-0.3 0, 0.0 0.768 67.0 62.6 -64.7 -23.7 8.5 18.9 -3.9 46 46 A E T 3 S- 0 0 66 -3,-0.4 -1,-0.3 1,-0.0 -2,-0.1 0.641 107.4-127.5 -75.8 -13.6 7.2 15.4 -3.9 47 47 A G < - 0 0 54 -3,-1.5 -2,-0.1 1,-0.2 -3,-0.1 0.833 34.9-176.6 73.2 36.7 4.2 16.6 -1.9 48 48 A F - 0 0 22 1,-0.1 2,-2.0 53,-0.0 -1,-0.2 -0.345 38.8-105.9 -63.1 149.6 4.3 14.1 1.0 49 49 A D + 0 0 144 2,-0.1 2,-0.5 0, 0.0 -1,-0.1 -0.455 52.4 166.8 -80.1 72.7 1.4 14.7 3.4 50 50 A F - 0 0 21 -2,-2.0 38,-0.1 1,-0.1 37,-0.1 -0.763 25.6-159.5 -88.4 130.1 3.1 16.3 6.3 51 51 A S S S+ 0 0 118 -2,-0.5 2,-0.3 36,-0.3 -1,-0.1 0.339 70.4 78.6 -90.3 3.6 0.7 17.9 8.7 52 52 A V S S- 0 0 18 35,-0.1 2,-0.1 33,-0.1 -2,-0.1 -0.837 84.8-108.0-113.4 147.6 3.3 20.1 10.2 53 53 A S - 0 0 80 -2,-0.3 29,-0.3 1,-0.1 30,-0.2 -0.396 43.2 -84.0 -80.9 157.8 4.6 23.4 8.6 54 54 A S S S+ 0 0 74 27,-0.1 2,-0.2 -2,-0.1 -1,-0.1 -0.247 81.4 90.8 -81.0 175.2 8.0 24.1 6.9 55 55 A P - 0 0 59 0, 0.0 27,-1.1 0, 0.0 2,-0.3 0.548 66.2-168.5 -65.8 159.2 10.7 24.8 6.9 56 56 A Y E -CD 42 81C 25 -14,-0.6 -14,-2.4 25,-0.2 2,-0.3 -0.865 9.0-161.6-117.5 151.7 11.7 21.1 7.2 57 57 A Y E -CD 41 80C 33 23,-2.8 23,-2.3 -2,-0.3 2,-0.4 -0.973 9.8-140.7-132.7 145.6 15.1 19.7 8.0 58 58 A E E +CD 40 79C 12 -18,-2.9 -18,-1.5 -2,-0.3 21,-0.2 -0.880 18.2 177.6-112.7 142.7 16.3 16.1 7.4 59 59 A W E - D 0 78C 2 19,-2.0 19,-2.8 -2,-0.4 2,-0.1 -0.998 34.3-103.1-141.9 136.4 18.6 14.1 9.6 60 60 A P E - D 0 77C 1 0, 0.0 8,-0.5 0, 0.0 2,-0.5 -0.352 24.8-160.8 -65.8 138.5 19.8 10.5 9.2 61 61 A I B -G 67 0D 7 15,-1.6 15,-0.4 12,-0.2 2,-0.4 -0.978 18.8-139.3-115.7 123.5 18.2 7.7 11.2 62 62 A L > - 0 0 34 4,-0.7 3,-2.0 -2,-0.5 12,-0.1 -0.751 12.0-137.7 -94.3 136.8 20.4 4.6 11.4 63 63 A S T 3 S+ 0 0 81 -2,-0.4 -53,-0.1 1,-0.3 -1,-0.1 0.832 103.6 63.6 -54.2 -33.1 19.2 1.0 11.1 64 64 A S T 3 S- 0 0 74 1,-0.1 -1,-0.3 2,-0.1 3,-0.1 0.641 110.4-117.9 -67.1 -20.0 21.6 0.2 14.0 65 65 A G S < S+ 0 0 42 -3,-2.0 2,-0.1 1,-0.4 -2,-0.1 0.289 74.8 126.2 96.3 -11.2 19.9 2.4 16.5 66 66 A D - 0 0 117 1,-0.1 -4,-0.7 -5,-0.0 -1,-0.4 -0.485 67.7-107.5 -80.2 155.7 23.0 4.5 16.9 67 67 A V B -G 61 0D 60 -2,-0.1 -6,-0.1 -3,-0.1 2,-0.1 -0.649 42.0 -99.6 -84.0 135.8 22.8 8.3 16.5 68 68 A Y + 0 0 7 -8,-0.5 3,-0.1 -2,-0.3 -1,-0.1 -0.331 47.6 165.9 -57.4 125.4 24.4 9.6 13.3 69 69 A S - 0 0 106 1,-0.7 2,-0.2 3,-0.1 -35,-0.2 0.103 61.0 -67.8-131.7 23.8 27.8 10.9 14.0 70 70 A G S S+ 0 0 22 -37,-0.2 -1,-0.7 1,-0.1 -37,-0.0 -0.661 94.0 84.5 114.4-174.9 29.3 11.3 10.5 71 71 A G S S- 0 0 59 -2,-0.2 -36,-0.2 -3,-0.1 -1,-0.1 -0.316 95.8 -5.4 77.6-172.1 30.2 8.5 8.2 72 72 A S - 0 0 100 1,-0.2 -3,-0.1 -38,-0.1 -2,-0.1 -0.433 57.2-158.9 -64.5 128.9 27.7 6.9 5.9 73 73 A P - 0 0 23 0, 0.0 3,-0.4 0, 0.0 -12,-0.2 0.498 24.9-147.8 -85.1 -7.8 24.3 8.2 6.5 74 74 A G - 0 0 43 1,-0.2 -12,-0.1 -14,-0.1 0, 0.0 -0.267 36.9 -69.8 69.6-163.0 22.4 5.3 5.0 75 75 A A S S+ 0 0 23 -14,-0.1 17,-1.9 -69,-0.1 2,-0.3 0.497 98.8 93.9-108.5 -6.6 19.1 5.9 3.2 76 76 A D E + E 0 91C 1 -15,-0.4 -15,-1.6 -3,-0.4 2,-0.3 -0.734 46.5 179.5 -98.4 143.4 16.8 6.8 6.0 77 77 A R E -DE 60 90C 6 13,-2.9 13,-3.1 -2,-0.3 2,-0.4 -0.993 22.7-144.1-140.7 147.4 15.9 10.2 7.3 78 78 A V E -DE 59 89C 0 -19,-2.8 -19,-2.0 -2,-0.3 2,-0.5 -0.837 21.8-148.0-102.5 140.8 13.7 11.8 9.9 79 79 A V E +DE 58 88C 0 9,-3.4 8,-3.4 -2,-0.4 9,-1.7 -0.969 22.3 169.8-117.1 124.8 12.1 15.1 8.9 80 80 A F E -DE 57 86C 0 -23,-2.3 -23,-2.8 -2,-0.5 6,-0.2 -0.906 21.4-131.0-128.9 157.9 11.5 17.7 11.5 81 81 A N E > -D 56 0C 3 4,-2.0 3,-2.0 -2,-0.3 -25,-0.2 -0.379 39.1 -84.2-101.8-177.7 10.4 21.4 11.3 82 82 A E T 3 S+ 0 0 68 -27,-1.1 -26,-0.1 -29,-0.3 -28,-0.1 0.759 127.0 52.8 -56.3 -28.6 11.6 24.7 12.8 83 83 A N T 3 S- 0 0 127 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.147 119.5-105.5 -97.2 20.0 9.5 24.0 15.9 84 84 A N S < S+ 0 0 67 -3,-2.0 2,-0.4 1,-0.2 -2,-0.1 0.872 71.7 148.3 59.0 37.8 11.0 20.5 16.6 85 85 A Q - 0 0 92 -32,-0.1 -4,-2.0 -4,-0.0 2,-0.5 -0.858 53.7-113.2-102.4 138.9 7.8 18.9 15.3 86 86 A L E +E 80 0C 54 -2,-0.4 -6,-0.3 -6,-0.2 3,-0.1 -0.604 33.6 177.3 -74.5 121.3 8.0 15.5 13.6 87 87 A A E - 0 0 15 -8,-3.4 -36,-0.3 -2,-0.5 2,-0.3 0.876 53.2 -73.1 -88.7 -43.7 7.1 15.8 10.0 88 88 A G E -E 79 0C 12 -9,-1.7 -9,-3.4 -38,-0.1 2,-0.4 -0.967 36.9 -89.8 168.2 179.2 7.8 12.2 9.0 89 89 A V E +E 78 0C 5 -2,-0.3 14,-2.7 -11,-0.2 2,-0.3 -0.978 44.9 174.0-120.1 125.9 10.2 9.4 8.2 90 90 A I E -EF 77 102C 0 -13,-3.1 -13,-2.9 -2,-0.4 2,-0.3 -0.870 12.6-155.1-132.9 168.0 11.4 9.0 4.7 91 91 A T E -EF 76 101C 2 10,-3.1 10,-2.6 -2,-0.3 -15,-0.2 -0.996 29.1-146.7-150.2 152.6 13.8 7.0 2.6 92 92 A H S > S+ 0 0 43 -17,-1.9 3,-1.9 -2,-0.3 2,-0.2 0.602 75.0 110.5 -82.3 -19.0 15.9 6.9 -0.6 93 93 A T T 3 S+ 0 0 61 -18,-0.3 -86,-0.1 1,-0.3 -2,-0.1 -0.446 87.1 9.7 -64.6 126.8 15.3 3.1 -0.6 94 94 A G T 3 S+ 0 0 79 1,-0.3 2,-0.3 -2,-0.2 -1,-0.3 0.607 109.6 103.9 79.6 13.3 12.9 2.2 -3.4 95 95 A A S < S- 0 0 24 -3,-1.9 -1,-0.3 4,-0.2 6,-0.1 -0.948 77.9-101.9-125.3 146.6 13.2 5.6 -5.0 96 96 A S S > S- 0 0 88 -2,-0.3 3,-2.6 4,-0.1 -3,-0.0 -0.390 76.6 -36.1 -70.6 145.9 15.2 6.6 -8.1 97 97 A G T 3 S- 0 0 69 1,-0.3 -2,-0.2 -2,-0.1 0, 0.0 -0.154 125.2 -18.7 48.8-124.8 18.4 8.4 -7.5 98 98 A N T 3 S+ 0 0 104 2,-0.1 -1,-0.3 0, 0.0 -2,-0.1 0.123 107.2 116.7-100.8 17.0 18.3 10.8 -4.6 99 99 A N < - 0 0 58 -3,-2.6 2,-0.3 -7,-0.1 -4,-0.2 -0.055 55.1-129.8 -75.4-178.1 14.6 11.0 -4.5 100 100 A F - 0 0 13 -6,-0.1 2,-0.3 -8,-0.0 -8,-0.2 -0.949 17.7-168.1-138.7 159.7 12.5 9.8 -1.6 101 101 A V E -F 91 0C 53 -10,-2.6 -10,-3.1 -2,-0.3 2,-0.2 -0.932 37.7 -99.7-137.8 155.8 9.6 7.7 -0.7 102 102 A E E -F 90 0C 90 -2,-0.3 -12,-0.3 -12,-0.2 2,-0.2 -0.532 30.7-117.3 -81.9 149.2 7.8 7.7 2.7 103 103 A b 0 0 14 -14,-2.7 -14,-0.2 -2,-0.2 -97,-0.2 -0.586 360.0 360.0 -79.9 145.7 8.5 5.1 5.3 104 104 A T 0 0 138 -99,-2.1 -98,-0.1 -2,-0.2 -1,-0.1 0.593 360.0 360.0-100.0 360.0 5.4 3.0 6.0