==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE(ENDORIBONUCLEASE) 23-SEP-91 8RNT . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR J.DING,H.-W.CHOE,J.GRANZIN,W.SAENGER . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5448.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 54.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 26.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 148 0, 0.0 2,-0.4 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 160.5 5.9 -4.7 15.3 2 2 A a - 0 0 49 1,-0.1 10,-0.2 10,-0.1 3,-0.2 -0.861 360.0-157.8 -97.6 134.2 7.4 -1.6 13.6 3 3 A D S S+ 0 0 87 8,-1.9 2,-0.4 -2,-0.4 9,-0.2 0.806 90.4 17.1 -79.8 -27.6 6.0 1.8 14.0 4 4 A Y E -A 11 0A 57 7,-2.0 7,-2.9 -3,-0.1 2,-0.5 -0.993 69.4-160.6-143.6 139.6 7.7 2.8 10.7 5 5 A T E -A 10 0A 46 -2,-0.4 99,-2.5 5,-0.2 2,-0.7 -0.991 5.5-175.0-122.4 116.3 9.1 0.6 8.1 6 6 A b E > S-A 9 0A 0 3,-2.3 3,-2.7 -2,-0.5 2,-0.6 -0.937 70.8 -53.6-114.6 96.6 11.6 2.0 5.6 7 7 A G T 3 S- 0 0 46 -2,-0.7 97,-0.1 1,-0.3 84,-0.0 -0.527 123.3 -24.4 73.3-118.5 12.4 -0.7 3.0 8 8 A S T 3 S+ 0 0 117 -2,-0.6 2,-0.4 -3,-0.1 -1,-0.3 0.352 115.6 109.1-109.1 11.9 13.3 -3.6 5.3 9 9 A N E < -A 6 0A 51 -3,-2.7 -3,-2.3 -7,-0.0 2,-0.5 -0.741 54.8-154.3 -91.5 140.2 14.4 -1.3 8.2 10 10 A a E -A 5 0A 66 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.929 12.6-176.9-116.2 132.2 12.1 -1.3 11.2 11 11 A Y E -A 4 0A 3 -7,-2.9 -7,-2.0 -2,-0.5 -8,-1.9 -0.969 14.8-146.0-126.6 145.2 11.8 1.6 13.7 12 12 A S > - 0 0 35 -2,-0.4 4,-1.9 -10,-0.2 3,-0.5 -0.610 36.6-105.6 -99.8 165.2 10.0 2.2 16.8 13 13 A S H > S+ 0 0 58 1,-0.2 4,-2.6 -2,-0.2 5,-0.2 0.847 123.1 58.4 -56.2 -34.8 8.5 5.5 18.0 14 14 A S H > S+ 0 0 75 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.888 103.7 49.5 -64.0 -40.6 11.5 5.6 20.5 15 15 A D H > S+ 0 0 49 -3,-0.5 4,-2.1 2,-0.2 -1,-0.2 0.908 113.3 47.9 -64.0 -38.7 14.1 5.3 17.7 16 16 A V H X S+ 0 0 2 -4,-1.9 4,-3.1 1,-0.2 -2,-0.2 0.913 111.5 49.1 -67.5 -48.7 12.3 8.2 15.9 17 17 A S H X S+ 0 0 74 -4,-2.6 4,-2.1 2,-0.2 -1,-0.2 0.888 111.7 48.6 -56.7 -44.4 12.1 10.4 19.1 18 18 A T H X S+ 0 0 75 -4,-2.0 4,-1.6 2,-0.2 -1,-0.2 0.934 113.5 47.1 -64.5 -49.7 15.8 9.9 19.9 19 19 A A H X S+ 0 0 8 -4,-2.1 4,-2.3 1,-0.2 -2,-0.2 0.941 112.4 49.0 -63.8 -46.4 16.9 10.7 16.3 20 20 A Q H X S+ 0 0 25 -4,-3.1 4,-3.2 1,-0.2 5,-0.3 0.881 108.2 54.5 -59.4 -41.9 14.7 13.9 16.1 21 21 A A H X S+ 0 0 60 -4,-2.1 4,-2.0 1,-0.2 -1,-0.2 0.907 111.2 44.3 -57.4 -45.7 16.0 15.1 19.5 22 22 A A H X S+ 0 0 28 -4,-1.6 4,-1.6 -5,-0.2 -1,-0.2 0.927 115.5 46.8 -66.3 -45.8 19.6 14.9 18.3 23 23 A G H X S+ 0 0 0 -4,-2.3 4,-1.9 2,-0.2 -2,-0.2 0.876 112.3 50.7 -67.4 -40.9 18.9 16.5 14.9 24 24 A Y H X S+ 0 0 30 -4,-3.2 4,-2.5 1,-0.2 5,-0.2 0.875 107.6 53.4 -65.9 -38.6 16.8 19.4 16.4 25 25 A K H X S+ 0 0 100 -4,-2.0 4,-2.0 -5,-0.3 -1,-0.2 0.906 108.2 48.8 -63.6 -40.2 19.5 20.2 18.9 26 26 A L H <>S+ 0 0 33 -4,-1.6 5,-2.7 1,-0.2 4,-0.4 0.913 110.2 53.6 -64.0 -39.0 22.1 20.5 16.1 27 27 A H H ><5S+ 0 0 44 -4,-1.9 3,-1.2 1,-0.2 -2,-0.2 0.885 109.3 47.1 -56.9 -50.9 19.6 22.8 14.3 28 28 A E H 3<5S+ 0 0 107 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.888 113.8 49.7 -58.1 -36.7 19.3 25.0 17.4 29 29 A D T 3<5S- 0 0 97 -4,-2.0 -1,-0.2 -5,-0.2 -2,-0.2 0.505 109.6-122.1 -82.1 -4.6 23.1 25.1 17.7 30 30 A G T < 5 + 0 0 70 -3,-1.2 2,-0.3 -4,-0.4 -3,-0.2 0.790 69.3 132.6 65.5 34.9 23.7 26.0 14.0 31 31 A E < - 0 0 107 -5,-2.7 2,-0.3 -6,-0.1 -1,-0.2 -0.843 38.5-167.9-120.6 158.1 25.8 22.9 13.6 32 32 A T - 0 0 60 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.894 4.7-157.4-138.1 161.2 26.0 20.1 11.1 33 33 A V B > +B 38 0B 36 5,-2.2 5,-2.7 -2,-0.3 37,-0.2 -0.937 50.7 36.8-135.7 153.3 27.7 16.6 11.0 34 34 A G T > 5S- 0 0 28 -2,-0.3 3,-1.7 35,-0.3 38,-0.1 0.060 90.7 -76.9 92.2 158.8 28.7 14.5 8.0 35 35 A S T 3 5S+ 0 0 117 36,-0.3 -1,-0.1 1,-0.3 37,-0.1 0.839 133.0 46.7 -63.1 -32.9 30.0 15.1 4.6 36 36 A N T 3 5S- 0 0 111 -3,-0.1 -1,-0.3 4,-0.0 -2,-0.1 0.175 114.0-118.5 -98.0 16.0 26.6 16.1 3.4 37 37 A S T < 5 - 0 0 54 -3,-1.7 -3,-0.2 1,-0.2 -2,-0.1 0.944 37.6-131.6 44.7 77.5 25.9 18.4 6.4 38 38 A Y B + 0 0 45 -2,-0.5 3,-1.5 1,-0.2 -2,-0.0 -0.297 49.1 143.1 -84.2 58.3 8.6 18.7 -0.2 45 45 A Y T 3 + 0 0 144 -2,-1.7 -1,-0.2 1,-0.3 0, 0.0 0.665 69.1 61.7 -71.4 -19.6 8.6 18.6 -4.0 46 46 A E T 3 S- 0 0 73 -3,-0.3 -1,-0.3 2,-0.0 -2,-0.1 0.586 107.3-128.3 -79.5 -10.6 7.1 15.0 -3.8 47 47 A G < - 0 0 55 -3,-1.5 -2,-0.1 1,-0.2 -3,-0.1 0.845 34.3-176.3 72.5 35.6 4.0 16.5 -2.0 48 48 A F - 0 0 26 1,-0.1 2,-1.8 53,-0.0 -1,-0.2 -0.395 35.3-113.5 -64.5 146.4 3.9 14.2 1.0 49 49 A D + 0 0 155 2,-0.1 2,-0.4 -2,-0.1 -1,-0.1 -0.558 48.1 169.6 -81.7 78.6 0.8 14.9 3.2 50 50 A F - 0 0 21 -2,-1.8 38,-0.1 1,-0.1 37,-0.1 -0.807 28.4-154.1 -91.6 138.7 2.6 16.3 6.3 51 51 A S S S+ 0 0 121 -2,-0.4 2,-0.3 36,-0.3 -1,-0.1 0.296 74.2 77.3 -90.7 6.9 0.1 17.9 8.7 52 52 A V S S- 0 0 22 35,-0.1 2,-0.1 33,-0.1 -2,-0.1 -0.870 85.1-112.5-115.7 147.7 2.9 20.2 10.2 53 53 A S - 0 0 80 -2,-0.3 29,-0.3 1,-0.1 30,-0.2 -0.431 40.1 -85.3 -82.7 159.5 4.1 23.3 8.4 54 54 A S S S+ 0 0 74 27,-0.1 2,-0.2 -2,-0.1 -1,-0.1 -0.218 79.5 99.2 -79.7 175.0 7.5 24.0 6.9 55 55 A P - 0 0 47 0, 0.0 27,-1.3 0, 0.0 2,-0.3 0.578 67.4-169.8 -60.4 149.7 10.3 24.9 7.0 56 56 A Y E -CD 42 81C 25 -14,-0.7 -14,-2.5 -2,-0.2 2,-0.3 -0.841 12.1-161.1-119.3 156.6 11.3 21.2 7.2 57 57 A Y E -CD 41 80C 29 23,-3.0 23,-2.4 -2,-0.3 2,-0.4 -0.985 9.1-142.8-134.2 139.5 14.7 19.7 7.9 58 58 A E E +CD 40 79C 17 -18,-2.5 -18,-1.3 -2,-0.3 21,-0.2 -0.867 19.8 174.4-107.7 146.8 15.9 16.2 7.2 59 59 A W E - D 0 78C 2 19,-2.2 19,-2.8 -2,-0.4 -36,-0.1 -0.993 34.9-103.3-146.2 137.0 18.2 14.1 9.5 60 60 A P E - D 0 77C 1 0, 0.0 8,-0.5 0, 0.0 2,-0.4 -0.313 23.9-163.1 -68.2 141.4 19.4 10.5 9.2 61 61 A I B -G 67 0D 7 15,-1.5 15,-0.4 12,-0.2 2,-0.3 -0.990 20.7-140.5-116.8 129.3 17.9 7.8 11.4 62 62 A L > - 0 0 35 4,-0.7 3,-1.9 -2,-0.4 12,-0.1 -0.740 13.2-135.3-101.9 145.1 20.1 4.7 11.4 63 63 A S T 3 S+ 0 0 84 -2,-0.3 -53,-0.1 1,-0.3 -1,-0.1 0.814 104.7 65.5 -61.0 -29.9 18.9 1.0 11.3 64 64 A S T 3 S- 0 0 75 1,-0.1 -1,-0.3 2,-0.1 3,-0.1 0.648 108.6-121.4 -66.0 -22.1 21.4 0.3 14.0 65 65 A G S < S+ 0 0 44 -3,-1.9 -2,-0.1 1,-0.4 2,-0.1 0.268 72.7 126.9 94.5 -10.2 19.6 2.5 16.6 66 66 A D - 0 0 112 1,-0.1 -4,-0.7 -5,-0.0 -1,-0.4 -0.496 69.0-109.4 -77.4 154.2 22.8 4.7 17.1 67 67 A V B -G 61 0D 63 -2,-0.1 -6,-0.1 -3,-0.1 2,-0.1 -0.702 43.3 -98.7 -84.4 141.5 22.4 8.4 16.6 68 68 A Y + 0 0 10 -8,-0.5 3,-0.1 -2,-0.4 -1,-0.1 -0.351 47.0 168.9 -62.8 132.4 24.0 9.7 13.4 69 69 A S - 0 0 104 1,-0.6 -35,-0.3 -2,-0.1 2,-0.2 0.273 61.1 -67.8-129.2 10.4 27.5 11.1 14.1 70 70 A G S S+ 0 0 22 -37,-0.2 -1,-0.6 2,-0.1 2,-0.1 -0.715 95.3 86.9 122.5 177.4 29.0 11.5 10.6 71 71 A G S S- 0 0 59 -2,-0.2 -36,-0.3 -3,-0.1 -1,-0.1 -0.544 96.0 -8.6 87.6-174.0 30.0 8.6 8.4 72 72 A S - 0 0 101 1,-0.1 -2,-0.1 -2,-0.1 -38,-0.0 -0.485 57.9-158.5 -68.0 127.6 27.4 7.0 6.0 73 73 A P - 0 0 26 0, 0.0 3,-0.3 0, 0.0 -12,-0.2 0.533 26.1-144.4 -84.3 -7.6 23.9 8.3 6.7 74 74 A G - 0 0 43 1,-0.2 -12,-0.1 -14,-0.1 0, 0.0 -0.235 35.5 -70.2 71.8-168.7 22.1 5.4 5.1 75 75 A A S S+ 0 0 25 -14,-0.1 17,-2.1 -69,-0.1 2,-0.3 0.607 99.4 91.8-104.7 -6.8 18.9 5.9 3.2 76 76 A D E - E 0 91C 2 -15,-0.4 -15,-1.5 -3,-0.3 2,-0.3 -0.718 47.5-177.8-100.8 146.1 16.5 6.8 5.9 77 77 A R E -DE 60 90C 7 13,-3.4 13,-2.6 -2,-0.3 2,-0.4 -0.986 23.7-146.4-140.0 147.1 15.5 10.2 7.3 78 78 A V E -DE 59 89C 0 -19,-2.8 -19,-2.2 -2,-0.3 2,-0.5 -0.847 24.1-151.7 -97.6 147.2 13.3 11.7 10.0 79 79 A V E +DE 58 88C 0 9,-3.0 8,-3.1 -2,-0.4 9,-1.4 -0.962 19.9 172.1-118.8 128.3 11.9 15.1 8.8 80 80 A F E -DE 57 86C 0 -23,-2.4 -23,-3.0 -2,-0.5 6,-0.2 -0.891 21.1-129.4-128.2 165.1 11.1 17.8 11.5 81 81 A N E > -D 56 0C 3 4,-1.9 3,-2.1 -2,-0.3 -25,-0.2 -0.420 38.2 -85.1-107.2-174.5 10.0 21.4 11.3 82 82 A E T 3 S+ 0 0 66 -27,-1.3 -26,-0.1 1,-0.3 -28,-0.1 0.799 126.0 54.1 -62.9 -24.1 11.2 24.7 12.8 83 83 A N T 3 S- 0 0 127 -30,-0.2 -1,-0.3 2,-0.1 -30,-0.0 0.184 119.4-106.5 -94.1 17.4 9.0 24.1 15.9 84 84 A N S < S+ 0 0 66 -3,-2.1 2,-0.4 1,-0.2 -2,-0.1 0.887 72.1 145.6 60.7 38.8 10.5 20.6 16.6 85 85 A Q - 0 0 88 -32,-0.1 -4,-1.9 -4,-0.0 2,-0.4 -0.897 54.9-112.8-106.8 141.6 7.3 18.8 15.4 86 86 A L E +E 80 0C 57 -2,-0.4 -6,-0.2 -6,-0.2 3,-0.1 -0.590 32.1 178.8 -74.7 131.3 7.7 15.5 13.6 87 87 A A E - 0 0 16 -8,-3.1 -36,-0.3 1,-0.4 2,-0.3 0.846 55.4 -63.8 -95.5 -49.0 6.7 15.8 9.9 88 88 A G E -E 79 0C 11 -9,-1.4 -9,-3.0 -38,-0.1 2,-0.4 -0.966 38.0 -96.1 177.8-179.4 7.4 12.1 8.8 89 89 A V E +E 78 0C 4 -2,-0.3 14,-2.3 -11,-0.2 2,-0.3 -0.995 47.2 171.3-121.6 121.6 9.8 9.3 8.3 90 90 A I E -EF 77 102C 0 -13,-2.6 -13,-3.4 -2,-0.4 2,-0.3 -0.832 13.5-156.1-130.0 169.9 11.0 9.0 4.6 91 91 A T E -EF 76 101C 2 10,-2.9 10,-2.8 -2,-0.3 -15,-0.2 -0.991 30.6-143.4-152.9 153.6 13.6 7.0 2.7 92 92 A H S > S+ 0 0 47 -17,-2.1 3,-2.0 -2,-0.3 -16,-0.1 0.580 74.0 113.2 -83.3 -19.9 15.7 7.0 -0.5 93 93 A T T 3 S+ 0 0 65 1,-0.3 -86,-0.2 -18,-0.2 8,-0.1 -0.416 88.7 6.9 -61.6 124.5 15.1 3.1 -0.5 94 94 A G T 3 S+ 0 0 80 1,-0.3 2,-0.4 -2,-0.1 -1,-0.3 0.598 109.8 105.8 76.4 15.5 13.0 2.2 -3.5 95 95 A A S < S- 0 0 25 -3,-2.0 -1,-0.3 4,-0.2 2,-0.1 -0.948 74.1-108.3-128.5 145.4 13.1 5.7 -5.0 96 96 A S S > S- 0 0 90 -2,-0.4 3,-2.5 4,-0.1 -3,-0.0 -0.438 72.2 -34.0 -75.8 145.4 15.1 6.8 -8.0 97 97 A G T 3 S- 0 0 71 1,-0.3 -2,-0.2 -2,-0.1 0, 0.0 -0.226 125.9 -17.9 46.3-129.6 18.1 9.0 -7.6 98 98 A N T 3 S+ 0 0 50 2,-0.1 -1,-0.3 0, 0.0 -2,-0.1 0.149 108.4 112.2 -91.1 13.8 17.8 11.5 -4.7 99 99 A N < - 0 0 53 -3,-2.5 2,-0.3 -7,-0.1 -4,-0.2 -0.277 54.3-142.3 -77.0 175.1 14.0 11.2 -4.5 100 100 A F - 0 0 13 -6,-0.1 2,-0.3 -10,-0.0 -8,-0.2 -0.901 13.8-158.6-137.0 168.7 12.2 9.7 -1.6 101 101 A V E -F 91 0C 58 -10,-2.8 -10,-2.9 -2,-0.3 2,-0.2 -0.918 37.4-100.6-133.9 163.0 9.2 7.6 -0.7 102 102 A E E -F 90 0C 91 -2,-0.3 -12,-0.3 -12,-0.2 2,-0.2 -0.614 29.5-118.7 -88.6 150.5 7.6 7.5 2.7 103 103 A b 0 0 13 -14,-2.3 -97,-0.2 -2,-0.2 -14,-0.2 -0.497 360.0 360.0 -75.5 152.1 8.2 4.8 5.3 104 104 A T 0 0 143 -99,-2.5 -98,-0.1 -2,-0.2 -1,-0.1 0.553 360.0 360.0-113.0 360.0 5.0 2.9 6.1