==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE(ENDORIBONUCLEASE) 25-SEP-91 9RNT . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR J.MARTINEZ-OYANEDEL,U.HEINEMANN,W.SAENGER . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5462.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 56 53.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 148 0, 0.0 2,-0.4 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 159.0 6.0 -4.7 15.3 2 2 A a - 0 0 49 1,-0.1 10,-0.2 10,-0.1 3,-0.2 -0.830 360.0-159.4 -95.3 136.2 7.5 -1.7 13.5 3 3 A D S S+ 0 0 86 8,-1.8 2,-0.3 -2,-0.4 9,-0.2 0.792 90.9 15.9 -75.3 -32.8 6.0 1.8 14.0 4 4 A Y E S-A 11 0A 57 7,-2.1 7,-2.8 -3,-0.1 2,-0.5 -0.998 70.0-162.3-141.4 136.0 7.7 2.8 10.7 5 5 A T E -A 10 0A 47 -2,-0.3 99,-2.4 5,-0.2 2,-0.6 -0.987 5.3-175.8-124.4 119.0 9.1 0.5 8.0 6 6 A b E > S-A 9 0A 1 3,-2.6 3,-2.7 -2,-0.5 2,-0.5 -0.943 70.4 -51.6-116.3 101.7 11.6 1.9 5.5 7 7 A G T 3 S- 0 0 47 -2,-0.6 97,-0.1 1,-0.3 84,-0.0 -0.621 123.7 -25.2 69.9-116.4 12.4 -0.8 2.9 8 8 A S T 3 S+ 0 0 115 -2,-0.5 2,-0.4 -3,-0.1 -1,-0.3 0.332 114.6 109.0-112.4 7.6 13.4 -3.5 5.2 9 9 A N E < -A 6 0A 49 -3,-2.7 -3,-2.6 -7,-0.0 2,-0.5 -0.669 55.0-152.9 -87.5 137.3 14.4 -1.3 8.2 10 10 A a E -A 5 0A 67 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.928 13.5-176.5-113.5 128.6 12.1 -1.4 11.2 11 11 A Y E -A 4 0A 3 -7,-2.8 -7,-2.1 -2,-0.5 -8,-1.8 -0.969 14.0-147.8-124.7 143.9 11.9 1.6 13.6 12 12 A S > - 0 0 34 -2,-0.4 4,-1.7 -10,-0.2 3,-0.4 -0.623 36.5-105.6 -98.1 165.0 10.0 2.1 16.8 13 13 A S H > S+ 0 0 59 1,-0.2 4,-3.0 -2,-0.2 5,-0.3 0.857 123.3 58.3 -56.9 -33.6 8.5 5.5 17.9 14 14 A S H > S+ 0 0 73 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.905 103.3 51.7 -61.5 -41.8 11.5 5.5 20.5 15 15 A D H > S+ 0 0 51 -3,-0.4 4,-2.1 1,-0.2 -1,-0.2 0.913 112.9 44.8 -58.9 -43.8 14.0 5.3 17.6 16 16 A V H X S+ 0 0 2 -4,-1.7 4,-3.1 2,-0.2 -2,-0.2 0.904 111.8 50.8 -71.3 -43.5 12.3 8.3 15.8 17 17 A S H X S+ 0 0 74 -4,-3.0 4,-2.6 1,-0.2 5,-0.2 0.867 111.9 49.1 -61.9 -40.5 12.0 10.4 19.0 18 18 A T H X S+ 0 0 76 -4,-2.1 4,-1.7 -5,-0.3 -1,-0.2 0.961 114.0 45.0 -63.9 -50.1 15.8 9.8 19.8 19 19 A A H X S+ 0 0 7 -4,-2.1 4,-2.3 1,-0.2 -2,-0.2 0.925 113.0 50.7 -65.0 -43.0 16.9 10.7 16.2 20 20 A Q H X S+ 0 0 23 -4,-3.1 4,-3.1 1,-0.2 5,-0.3 0.856 108.6 51.3 -62.6 -40.6 14.7 13.8 16.1 21 21 A A H X S+ 0 0 60 -4,-2.6 4,-2.2 1,-0.2 -1,-0.2 0.897 111.7 46.5 -61.3 -40.0 16.0 15.1 19.4 22 22 A A H X S+ 0 0 24 -4,-1.7 4,-1.6 -5,-0.2 -1,-0.2 0.921 115.7 45.6 -64.6 -48.7 19.6 14.8 18.3 23 23 A G H X S+ 0 0 0 -4,-2.3 4,-1.7 2,-0.2 -2,-0.2 0.906 112.5 51.1 -64.8 -41.1 18.9 16.5 14.8 24 24 A Y H X S+ 0 0 31 -4,-3.1 4,-2.5 1,-0.2 5,-0.2 0.885 107.0 53.6 -68.5 -38.8 16.8 19.3 16.4 25 25 A K H X S+ 0 0 94 -4,-2.2 4,-2.3 -5,-0.3 -1,-0.2 0.923 108.1 49.9 -61.7 -43.1 19.6 20.1 19.0 26 26 A L H <>S+ 0 0 36 -4,-1.6 5,-2.5 2,-0.2 4,-0.5 0.882 108.9 53.5 -63.6 -36.2 22.1 20.4 16.1 27 27 A H H ><5S+ 0 0 46 -4,-1.7 3,-1.0 1,-0.2 -2,-0.2 0.889 110.1 46.9 -63.4 -45.7 19.6 22.8 14.3 28 28 A E H 3<5S+ 0 0 109 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.863 113.1 49.7 -63.8 -36.4 19.4 25.0 17.5 29 29 A D T 3<5S- 0 0 93 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.494 108.6-123.8 -79.3 -4.4 23.2 25.0 17.7 30 30 A G T < 5 + 0 0 72 -3,-1.0 2,-0.3 -4,-0.5 -3,-0.2 0.799 69.0 130.8 63.8 33.5 23.7 26.0 14.1 31 31 A E < - 0 0 121 -5,-2.5 2,-0.3 -6,-0.2 -1,-0.2 -0.776 38.3-168.2-117.0 157.2 25.8 22.8 13.6 32 32 A T - 0 0 66 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.934 4.7-156.2-141.3 163.7 25.9 20.0 11.2 33 33 A V B > +B 38 0B 41 5,-2.7 5,-2.7 -2,-0.3 37,-0.2 -0.960 51.0 39.4-136.2 157.3 27.7 16.6 10.9 34 34 A G T > 5S- 0 0 27 -2,-0.3 3,-1.7 35,-0.3 38,-0.1 0.057 90.7 -79.4 91.6 154.3 28.6 14.4 8.0 35 35 A S T 3 5S+ 0 0 103 1,-0.3 -1,-0.2 36,-0.3 37,-0.1 0.755 132.6 49.0 -63.3 -27.2 30.0 15.1 4.6 36 36 A N T 3 5S- 0 0 101 -3,-0.1 -1,-0.3 4,-0.0 -2,-0.1 0.143 113.9-121.0-100.9 18.2 26.5 16.1 3.4 37 37 A S T < 5 - 0 0 56 -3,-1.7 -3,-0.2 1,-0.1 -2,-0.1 0.943 36.5-131.2 41.9 76.9 26.0 18.4 6.4 38 38 A Y B + 0 0 47 -2,-0.5 3,-1.7 1,-0.2 -2,-0.0 -0.307 49.4 141.0 -86.0 52.3 8.6 18.8 -0.2 45 45 A Y T 3 + 0 0 140 -2,-1.3 -1,-0.2 1,-0.3 0, 0.0 0.718 68.0 62.2 -64.6 -23.7 8.5 18.5 -4.0 46 46 A E T 3 S- 0 0 81 -3,-0.3 -1,-0.3 1,-0.0 -2,-0.1 0.596 106.4-129.4 -76.1 -9.8 7.1 15.0 -3.8 47 47 A G < - 0 0 53 -3,-1.7 -2,-0.1 1,-0.2 -3,-0.1 0.779 33.4-176.3 74.3 32.4 4.0 16.5 -2.0 48 48 A F - 0 0 24 1,-0.1 2,-2.1 40,-0.0 -1,-0.2 -0.334 35.5-114.5 -63.8 143.7 3.8 14.2 1.0 49 49 A D + 0 0 157 2,-0.0 2,-0.3 0, 0.0 -1,-0.1 -0.536 46.6 173.5 -80.8 75.0 0.8 15.1 3.1 50 50 A F - 0 0 23 -2,-2.1 38,-0.1 1,-0.1 37,-0.1 -0.647 26.9-152.5 -83.5 143.6 2.5 16.3 6.2 51 51 A S S S+ 0 0 117 36,-0.3 2,-0.3 -2,-0.3 -1,-0.1 0.379 74.8 74.3 -93.5 3.4 0.1 17.9 8.7 52 52 A V S S- 0 0 20 35,-0.1 -2,-0.1 33,-0.1 2,-0.1 -0.858 86.2-110.1-113.5 150.1 2.8 20.2 10.3 53 53 A S - 0 0 70 -2,-0.3 30,-0.2 1,-0.1 29,-0.2 -0.423 41.4 -89.2 -81.3 160.1 4.1 23.3 8.5 54 54 A S S S+ 0 0 75 27,-0.1 2,-0.2 2,-0.1 27,-0.1 -0.197 78.4 101.7 -81.1 176.8 7.5 24.0 6.9 55 55 A P - 0 0 45 0, 0.0 27,-1.3 0, 0.0 2,-0.3 0.547 67.0-169.1 -61.0 154.0 10.3 24.9 6.9 56 56 A Y E -CD 42 81C 25 -14,-0.6 -14,-2.5 25,-0.2 2,-0.4 -0.838 12.2-161.7-119.2 154.6 11.3 21.2 7.2 57 57 A Y E -CD 41 80C 33 23,-2.6 23,-2.1 -2,-0.3 2,-0.4 -0.972 9.7-142.8-137.5 142.1 14.7 19.6 7.9 58 58 A E E +CD 40 79C 17 -18,-2.9 -18,-1.4 -2,-0.4 21,-0.2 -0.856 19.6 175.0-106.7 145.3 15.9 16.1 7.2 59 59 A W E - D 0 78C 3 19,-2.2 19,-2.7 -2,-0.4 -36,-0.1 -0.985 34.9-101.8-146.0 139.9 18.2 14.2 9.5 60 60 A P E - D 0 77C 1 0, 0.0 8,-0.5 0, 0.0 2,-0.4 -0.311 22.9-160.3 -71.3 143.5 19.4 10.5 9.2 61 61 A I - 0 0 7 15,-1.7 15,-0.4 12,-0.2 2,-0.4 -0.989 20.1-140.9-117.1 128.5 17.8 7.8 11.2 62 62 A L > - 0 0 35 4,-0.7 3,-2.2 -2,-0.4 12,-0.1 -0.758 11.8-136.8-100.4 138.3 20.1 4.7 11.4 63 63 A S T 3 S+ 0 0 84 -2,-0.4 -53,-0.1 1,-0.3 -1,-0.1 0.796 102.8 64.2 -59.7 -28.7 19.0 1.1 11.2 64 64 A S T 3 S- 0 0 76 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.629 110.2-118.1 -68.6 -17.0 21.4 0.2 14.0 65 65 A G S < S+ 0 0 43 -3,-2.2 2,-0.1 1,-0.4 -2,-0.1 0.292 73.7 127.7 94.7 -12.1 19.6 2.5 16.5 66 66 A D - 0 0 113 1,-0.1 -4,-0.7 -5,-0.0 -1,-0.4 -0.545 66.8-110.0 -75.9 154.3 22.7 4.7 17.0 67 67 A V - 0 0 66 -2,-0.1 2,-0.1 -3,-0.1 -6,-0.1 -0.616 42.5 -99.8 -82.2 144.8 22.4 8.4 16.6 68 68 A Y + 0 0 6 -8,-0.5 3,-0.1 -2,-0.3 -1,-0.1 -0.419 50.5 160.6 -64.4 133.5 24.0 9.7 13.4 69 69 A S - 0 0 103 1,-0.6 -35,-0.3 -2,-0.1 2,-0.2 0.234 62.9 -58.4-136.2 12.0 27.4 11.3 14.0 70 70 A G S S+ 0 0 29 -37,-0.2 -1,-0.6 2,-0.1 2,-0.1 -0.721 93.1 78.1 132.1 176.1 29.1 11.2 10.7 71 71 A G S S- 0 0 59 -2,-0.2 -36,-0.3 -3,-0.1 -1,-0.1 -0.436 97.5 -4.4 83.9-165.5 30.0 8.5 8.2 72 72 A S - 0 0 98 1,-0.2 -2,-0.1 -2,-0.1 -38,-0.0 -0.528 56.6-158.1 -69.9 132.8 27.4 7.0 5.9 73 73 A P - 0 0 24 0, 0.0 3,-0.3 0, 0.0 -12,-0.2 0.490 27.0-143.9 -87.1 -7.0 23.9 8.3 6.6 74 74 A G - 0 0 45 1,-0.2 -12,-0.1 -14,-0.1 17,-0.0 -0.224 35.0 -74.2 72.9-171.8 22.1 5.4 5.0 75 75 A A S S+ 0 0 26 -14,-0.1 17,-2.2 -69,-0.1 2,-0.3 0.566 98.9 90.8-109.1 -2.1 18.9 6.0 3.1 76 76 A D E - E 0 91C 2 -15,-0.4 -15,-1.7 -3,-0.3 2,-0.3 -0.703 49.0-179.5-104.2 147.1 16.4 6.8 5.9 77 77 A R E -DE 60 90C 7 13,-3.2 13,-2.5 -2,-0.3 2,-0.4 -0.992 25.1-141.3-142.2 148.9 15.5 10.2 7.3 78 78 A V E -DE 59 89C 0 -19,-2.7 -19,-2.2 -2,-0.3 2,-0.5 -0.885 22.8-152.3 -98.2 142.6 13.3 11.8 10.0 79 79 A V E +DE 58 88C 0 9,-2.8 8,-3.0 -2,-0.4 9,-1.5 -0.983 20.6 170.5-118.1 129.7 11.8 15.1 8.8 80 80 A F E -DE 57 86C 0 -23,-2.1 -23,-2.6 -2,-0.5 6,-0.2 -0.864 22.4-127.3-131.6 165.2 11.0 17.7 11.5 81 81 A N E > -D 56 0C 1 4,-2.1 3,-2.2 -2,-0.3 -25,-0.2 -0.406 37.9 -84.8-106.7-177.2 10.0 21.4 11.3 82 82 A E T 3 S+ 0 0 66 -27,-1.3 -26,-0.1 1,-0.3 -28,-0.1 0.756 127.1 53.2 -60.0 -25.3 11.2 24.6 12.8 83 83 A N T 3 S- 0 0 115 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.072 119.4-106.9 -95.0 16.6 9.0 24.0 15.9 84 84 A N S < S+ 0 0 66 -3,-2.2 2,-0.4 1,-0.2 -2,-0.1 0.844 71.4 145.8 60.8 38.4 10.5 20.5 16.5 85 85 A Q - 0 0 83 -32,-0.2 -4,-2.1 -65,-0.0 2,-0.4 -0.895 54.0-115.6-107.8 140.6 7.3 18.8 15.3 86 86 A L E +E 80 0C 57 -2,-0.4 -6,-0.3 -6,-0.2 3,-0.1 -0.601 31.1 179.5 -75.9 133.6 7.8 15.5 13.6 87 87 A A E - 0 0 16 -8,-3.0 -36,-0.3 -2,-0.4 2,-0.3 0.842 55.1 -62.0 -98.1 -39.8 6.6 15.7 9.9 88 88 A G E -E 79 0C 12 -9,-1.5 -9,-2.8 -38,-0.1 2,-0.4 -0.969 39.4 -95.7 172.8 179.2 7.3 12.1 8.8 89 89 A V E +E 78 0C 4 -2,-0.3 14,-2.6 14,-0.2 2,-0.3 -0.999 46.2 170.5-122.7 122.7 9.8 9.3 8.2 90 90 A I E -EF 77 102C 0 -13,-2.5 -13,-3.2 -2,-0.4 2,-0.3 -0.790 13.5-160.0-131.3 168.5 11.0 8.9 4.6 91 91 A T E -EF 76 101C 2 10,-2.7 10,-2.5 -2,-0.3 -15,-0.2 -0.995 30.2-140.2-152.8 156.2 13.6 7.0 2.7 92 92 A H S > S+ 0 0 43 -17,-2.2 3,-2.0 -2,-0.3 2,-0.2 0.571 73.7 113.7 -86.0 -13.9 15.6 7.0 -0.5 93 93 A T T 3 S+ 0 0 65 -18,-0.3 -86,-0.2 1,-0.3 -2,-0.1 -0.433 86.6 10.1 -65.5 128.4 15.1 3.2 -0.6 94 94 A G T 3 S+ 0 0 82 1,-0.3 2,-0.3 -2,-0.2 -1,-0.3 0.613 110.7 98.3 81.3 9.5 12.9 2.2 -3.6 95 95 A A S < S- 0 0 28 -3,-2.0 -1,-0.3 4,-0.2 2,-0.2 -0.931 76.0-110.5-129.9 150.8 13.0 5.8 -5.1 96 96 A S S > S- 0 0 88 -2,-0.3 3,-2.4 4,-0.1 -3,-0.0 -0.557 71.3 -28.0 -83.4 147.6 15.3 6.9 -8.0 97 97 A G T 3 S- 0 0 71 1,-0.3 -2,-0.1 -2,-0.2 0, 0.0 -0.225 126.2 -19.0 50.5-129.8 18.2 9.2 -7.5 98 98 A N T 3 S+ 0 0 92 2,-0.0 -1,-0.3 0, 0.0 -2,-0.1 0.232 107.8 115.6 -92.9 15.1 17.8 11.8 -4.7 99 99 A N < - 0 0 52 -3,-2.4 2,-0.3 -7,-0.1 -4,-0.2 -0.211 52.0-143.6 -76.3 172.5 13.9 11.3 -4.6 100 100 A F - 0 0 13 -6,-0.1 2,-0.3 -10,-0.0 -8,-0.2 -0.894 14.8-162.1-135.3 162.6 12.1 9.8 -1.6 101 101 A V E -F 91 0C 56 -10,-2.5 -10,-2.7 -2,-0.3 2,-0.2 -0.933 37.6-102.4-130.1 163.2 9.1 7.6 -0.7 102 102 A E E -F 90 0C 95 -2,-0.3 -12,-0.3 -12,-0.2 2,-0.2 -0.601 29.7-117.1 -88.4 150.6 7.5 7.6 2.7 103 103 A b 0 0 13 -14,-2.6 -97,-0.2 -2,-0.2 -14,-0.2 -0.516 360.0 360.0 -76.8 153.8 8.2 4.8 5.2 104 104 A T 0 0 143 -99,-2.4 -98,-0.1 -2,-0.2 -1,-0.1 0.577 360.0 360.0-111.1 360.0 5.0 2.9 6.0