==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 19-MAY-08 2RPJ . COMPND 2 MOLECULE: TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR F.HE,W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, . 50 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4252.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 21 42.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 10.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 12.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 21 A G 0 0 133 0, 0.0 4,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 47.7 2.1 0.0 -1.2 2 22 A S + 0 0 110 2,-0.1 2,-0.4 1,-0.0 3,-0.4 0.858 360.0 83.7 -90.2 -43.0 -0.5 1.8 -3.4 3 23 A S S S+ 0 0 128 1,-0.2 3,-0.1 3,-0.0 2,-0.0 -0.489 88.1 37.7 -66.8 117.5 1.6 4.8 -4.5 4 24 A G S S+ 0 0 75 -2,-0.4 2,-0.3 1,-0.2 -1,-0.2 -0.471 101.7 56.5 144.5 -69.7 3.7 3.7 -7.5 5 25 A S + 0 0 108 -3,-0.4 2,-0.2 -4,-0.2 -1,-0.2 -0.758 60.0 147.1 -99.8 144.1 1.8 1.4 -9.8 6 26 A S + 0 0 110 -2,-0.3 2,-1.0 2,-0.1 -3,-0.0 -0.844 30.2 66.9-154.4-171.0 -1.5 2.3 -11.4 7 27 A G S S- 0 0 75 -2,-0.2 2,-0.3 2,-0.1 -2,-0.0 -0.766 98.6 -35.5 93.2-101.7 -3.7 1.9 -14.5 8 28 A E - 0 0 184 -2,-1.0 2,-1.1 2,-0.0 -2,-0.1 -0.941 50.3-114.3-163.2 138.6 -4.8 -1.8 -14.8 9 29 A Q - 0 0 204 -2,-0.3 -2,-0.1 0, 0.0 0, 0.0 -0.635 44.2-177.9 -78.9 99.0 -3.3 -5.2 -14.0 10 30 A A - 0 0 80 -2,-1.1 -2,-0.0 1,-0.2 0, 0.0 -0.584 25.3-104.1 -97.1 160.4 -3.0 -6.8 -17.5 11 31 A P - 0 0 79 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 0.042 16.4-153.2 -69.8-176.4 -1.7 -10.3 -18.3 12 32 A G S S+ 0 0 82 2,-0.0 -2,-0.0 0, 0.0 0, 0.0 0.612 88.8 22.4-129.6 -40.1 1.7 -11.3 -19.7 13 33 A T S S+ 0 0 126 1,-0.2 9,-0.1 9,-0.0 0, 0.0 0.003 125.7 47.5-121.2 26.1 1.3 -14.5 -21.7 14 34 A A - 0 0 30 2,-0.1 2,-2.2 7,-0.1 -1,-0.2 -0.317 62.4-171.5-165.8 70.3 -2.4 -14.4 -22.4 15 35 A P + 0 0 91 0, 0.0 2,-0.2 0, 0.0 14,-0.1 -0.439 46.9 115.9 -69.7 78.6 -3.7 -11.0 -23.7 16 36 A a - 0 0 38 -2,-2.2 2,-0.1 4,-0.1 -2,-0.1 -0.641 59.6-103.4-132.2-170.5 -7.4 -11.8 -23.5 17 37 A S - 0 0 92 -2,-0.2 3,-0.5 1,-0.1 2,-0.4 -0.349 59.4 -50.8-108.0-170.1 -10.6 -10.6 -21.6 18 38 A R S S+ 0 0 241 1,-0.2 -1,-0.1 -2,-0.1 0, 0.0 -0.513 125.0 18.7 -68.4 117.9 -12.6 -12.0 -18.8 19 39 A G S S+ 0 0 43 -2,-0.4 13,-0.6 1,-0.3 2,-0.3 0.919 101.6 105.2 88.0 52.2 -13.4 -15.6 -19.5 20 40 A S E -A 31 0A 27 -3,-0.5 2,-0.4 11,-0.2 -1,-0.3 -0.989 48.8-152.3-159.0 153.2 -10.8 -16.6 -22.1 21 41 A S E -A 30 0A 11 9,-2.3 9,-2.8 -2,-0.3 2,-0.5 -0.995 15.3-136.8-135.6 130.2 -7.6 -18.5 -22.5 22 42 A W E -A 29 0A 90 -2,-0.4 2,-0.5 7,-0.3 7,-0.2 -0.744 19.0-156.2 -88.5 123.1 -4.8 -18.0 -24.9 23 43 A S E >> -A 28 0A 5 5,-1.9 4,-1.7 -2,-0.5 5,-0.8 -0.854 14.3-156.3-103.0 130.7 -3.4 -21.2 -26.5 24 44 A A T 45S+ 0 0 77 -2,-0.5 -1,-0.1 3,-0.2 -2,-0.0 0.634 89.6 69.8 -76.1 -14.1 0.1 -21.3 -27.9 25 45 A D T 45S+ 0 0 126 1,-0.1 -1,-0.2 3,-0.1 -3,-0.0 0.981 122.6 7.4 -66.7 -59.1 -0.9 -24.2 -30.1 26 46 A L T 45S- 0 0 110 2,-0.1 -2,-0.2 -3,-0.0 -1,-0.1 0.594 102.0-127.4 -98.5 -15.6 -3.2 -22.2 -32.5 27 47 A D T <5 + 0 0 96 -4,-1.7 2,-0.3 1,-0.2 -3,-0.2 0.993 63.0 107.7 65.0 79.8 -2.2 -18.8 -31.0 28 48 A K E -A 20 0A 83 -11,-0.3 3,-2.5 1,-0.1 4,-0.3 -0.851 11.6-133.2-105.2 136.8 -13.3 -19.1 -24.5 32 52 A b G > S+ 0 0 44 -13,-0.6 3,-1.6 -2,-0.4 4,-0.2 0.782 106.6 69.0 -54.6 -27.3 -13.5 -21.1 -21.3 33 53 A A G > S+ 0 0 48 -14,-0.3 3,-2.0 1,-0.3 -1,-0.3 0.766 81.2 74.7 -63.4 -25.3 -16.9 -22.3 -22.6 34 54 A S G X> S+ 0 0 40 -3,-2.5 4,-2.7 1,-0.3 3,-2.6 0.777 75.4 79.4 -58.5 -26.2 -15.0 -24.2 -25.3 35 55 A c G <4 S+ 0 0 29 -3,-1.6 -1,-0.3 -4,-0.3 -2,-0.2 0.802 74.5 76.3 -52.1 -30.1 -14.1 -26.7 -22.6 36 56 A R G <4 S+ 0 0 237 -3,-2.0 -1,-0.3 1,-0.2 -2,-0.2 0.807 115.4 18.5 -52.0 -30.9 -17.6 -28.1 -23.0 37 57 A A T <4 S+ 0 0 87 -3,-2.6 -2,-0.2 -4,-0.2 -1,-0.2 0.679 136.4 39.4-110.6 -31.0 -16.3 -29.7 -26.2 38 58 A R >< + 0 0 118 -4,-2.7 3,-0.7 1,-0.1 -2,-0.2 -0.596 60.4 153.2-122.6 69.7 -12.6 -29.6 -25.5 39 59 A P T 3 S+ 0 0 76 0, 0.0 -1,-0.1 0, 0.0 2,-0.1 0.665 74.7 57.2 -69.8 -16.7 -12.2 -30.4 -21.8 40 60 A H T 3 S+ 0 0 155 -3,-0.1 2,-0.3 -5,-0.1 3,-0.1 -0.376 83.6 119.4-111.6 52.0 -8.7 -31.8 -22.6 41 61 A S <> - 0 0 13 -3,-0.7 4,-2.1 -2,-0.1 5,-0.3 -0.837 69.2-123.7-117.3 155.1 -7.2 -28.7 -24.2 42 62 A D H > S+ 0 0 102 -2,-0.3 4,-2.4 1,-0.2 5,-0.2 0.956 115.6 44.3 -58.6 -53.9 -4.2 -26.5 -23.2 43 63 A F H > S+ 0 0 4 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.785 109.4 61.3 -62.3 -27.2 -6.2 -23.3 -23.1 44 64 A c H > S+ 0 0 13 2,-0.2 4,-0.9 1,-0.2 -1,-0.2 0.965 111.6 34.2 -64.3 -54.4 -8.9 -25.3 -21.2 45 65 A L H < S+ 0 0 134 -4,-2.1 -2,-0.2 1,-0.2 -1,-0.2 0.815 119.7 53.2 -71.1 -30.9 -6.7 -26.2 -18.2 46 66 A G H < S+ 0 0 30 -4,-2.4 -1,-0.2 -5,-0.3 -2,-0.2 0.798 97.9 67.8 -74.4 -29.0 -4.9 -22.8 -18.5 47 67 A b H < S+ 0 0 28 -4,-1.9 2,-0.4 -5,-0.2 3,-0.4 0.982 88.4 62.9 -52.8 -74.6 -8.1 -20.9 -18.4 48 68 A A S < S- 0 0 72 -4,-0.9 -1,-0.1 1,-0.2 -27,-0.0 -0.391 130.6 -16.8 -58.8 110.9 -9.2 -21.6 -14.8 49 69 A A 0 0 96 -2,-0.4 -1,-0.2 0, 0.0 -2,-0.1 0.966 360.0 360.0 53.2 87.2 -6.4 -20.1 -12.7 50 70 A A 0 0 129 -3,-0.4 -3,-0.1 0, 0.0 -2,-0.0 0.705 360.0 360.0 -71.6 360.0 -3.5 -19.6 -15.1