==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOME 07-DEC-03 1RQS . COMPND 2 MOLECULE: 50S RIBOSOMAL PROTEIN L7/L12; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI, ESCHERICHIA COLI O6, . AUTHOR E.V.BOCHAROV,A.G.SOBOL,K.V.PAVLOV,D.M.KORZHNEV,V.A.JARAVINE, . 74 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4915.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 73.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 17.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 37.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 47 A A 0 0 144 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 167.7 -2.3 -28.8 -0.1 2 48 A A + 0 0 87 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.463 360.0 131.0-147.5 66.6 -2.4 -27.7 -3.7 3 49 A E - 0 0 153 2,-0.0 2,-0.6 0, 0.0 0, 0.0 -0.989 45.0-143.1-126.9 129.1 -3.0 -24.0 -3.9 4 50 A E - 0 0 156 -2,-0.4 2,-1.6 1,-0.0 -2,-0.0 -0.809 13.0-140.1 -94.2 121.2 -0.9 -21.5 -5.9 5 51 A K + 0 0 134 -2,-0.6 3,-0.1 1,-0.2 -1,-0.0 -0.634 50.9 137.5 -82.9 87.8 -0.4 -18.1 -4.1 6 52 A T + 0 0 96 -2,-1.6 2,-0.4 1,-0.1 -1,-0.2 0.034 54.8 75.2-116.8 22.3 -0.8 -15.8 -7.1 7 53 A E + 0 0 131 46,-0.1 2,-0.3 2,-0.0 46,-0.1 -0.852 57.9 172.8-139.8 100.4 -2.9 -13.3 -5.2 8 54 A F E -A 52 0A 41 44,-1.9 44,-3.2 -2,-0.4 2,-0.4 -0.830 19.0-145.0-110.2 147.4 -1.2 -11.0 -2.7 9 55 A D E - 0 0 37 65,-2.4 65,-2.4 -2,-0.3 2,-0.6 -0.880 5.2-148.0-112.0 143.3 -2.7 -8.1 -0.8 10 56 A V E -AB 49 73A 2 39,-1.8 38,-2.9 -2,-0.4 39,-1.7 -0.939 18.7-177.1-115.1 111.9 -0.9 -4.9 0.1 11 57 A I E -AB 47 72A 37 61,-2.9 61,-2.3 -2,-0.6 2,-0.6 -0.810 21.2-135.7-107.9 148.7 -1.9 -3.2 3.3 12 58 A L E +AB 46 71A 3 34,-3.1 34,-1.6 -2,-0.3 59,-0.2 -0.922 27.5 167.1-106.8 116.7 -0.6 0.0 4.7 13 59 A K E S+ 0 0 81 57,-1.6 2,-0.4 -2,-0.6 -1,-0.2 0.914 70.3 7.3 -91.2 -56.1 0.1 -0.1 8.4 14 60 A A E - B 0 70A 38 56,-1.6 56,-2.9 1,-0.1 -1,-0.3 -0.995 51.0-155.6-136.2 127.2 2.1 3.1 9.0 15 61 A A - 0 0 11 -2,-0.4 3,-0.3 26,-0.2 7,-0.2 0.785 42.4-158.4 -66.7 -27.9 2.7 5.9 6.6 16 62 A G - 0 0 43 1,-0.2 3,-0.3 53,-0.1 2,-0.2 -0.369 47.4 -36.6 79.5-161.8 5.8 6.7 8.6 17 63 A A S S+ 0 0 111 51,-0.7 -1,-0.2 1,-0.2 52,-0.1 -0.145 131.3 66.6 -90.1 38.3 7.6 10.0 8.7 18 64 A N > + 0 0 55 -3,-0.3 4,-2.2 -2,-0.2 3,-0.3 -0.305 47.4 149.4-154.6 57.6 6.9 10.4 5.0 19 65 A K H > S+ 0 0 87 -3,-0.3 4,-3.2 1,-0.2 5,-0.2 0.802 75.4 62.2 -62.8 -29.4 3.1 10.8 4.5 20 66 A V H > S+ 0 0 108 1,-0.2 4,-1.3 2,-0.2 -1,-0.2 0.913 107.6 40.9 -63.7 -44.8 3.9 12.9 1.5 21 67 A A H > S+ 0 0 29 -3,-0.3 4,-2.9 2,-0.2 -1,-0.2 0.876 115.4 52.8 -70.5 -39.1 5.6 10.1 -0.3 22 68 A V H X S+ 0 0 1 -4,-2.2 4,-3.2 2,-0.2 -2,-0.2 0.975 106.6 49.8 -59.4 -59.0 3.0 7.6 0.9 23 69 A I H X S+ 0 0 37 -4,-3.2 4,-2.6 1,-0.3 -1,-0.2 0.837 112.7 51.0 -50.3 -36.3 0.0 9.6 -0.4 24 70 A K H X S+ 0 0 157 -4,-1.3 4,-2.5 -5,-0.2 -1,-0.3 0.961 109.3 47.5 -65.4 -53.7 1.9 9.8 -3.6 25 71 A A H X S+ 0 0 25 -4,-2.9 4,-2.0 2,-0.2 -2,-0.2 0.884 113.8 51.2 -54.0 -41.5 2.5 6.1 -3.8 26 72 A V H >X S+ 0 0 1 -4,-3.2 4,-2.8 2,-0.2 3,-1.3 0.993 111.2 42.7 -59.3 -68.6 -1.2 5.6 -3.0 27 73 A R H 3< S+ 0 0 121 -4,-2.6 -1,-0.2 1,-0.3 -2,-0.2 0.810 116.4 52.9 -47.0 -33.9 -2.6 7.9 -5.6 28 74 A G H 3< S+ 0 0 69 -4,-2.5 -1,-0.3 -5,-0.2 -2,-0.2 0.836 112.8 41.2 -72.8 -34.6 -0.1 6.3 -7.9 29 75 A A H << S+ 0 0 37 -4,-2.0 -2,-0.2 -3,-1.3 -1,-0.2 0.722 141.1 4.9 -85.8 -24.2 -1.1 2.8 -7.2 30 76 A T S < S- 0 0 63 -4,-2.8 -3,-0.2 -5,-0.2 -2,-0.1 0.636 79.0-134.3-121.0 -76.4 -4.8 3.6 -7.2 31 77 A G + 0 0 45 -5,-0.2 -4,-0.2 1,-0.1 3,-0.1 0.557 41.0 163.2 117.4 21.8 -5.7 7.2 -8.2 32 78 A L - 0 0 80 1,-0.1 -1,-0.1 -6,-0.1 -2,-0.1 -0.318 50.6 -79.6 -69.1 153.8 -8.2 8.0 -5.5 33 79 A G > - 0 0 22 1,-0.1 4,-3.2 4,-0.1 5,-0.3 -0.174 43.2-108.9 -53.5 145.1 -9.2 11.6 -4.8 34 80 A L H > S+ 0 0 117 1,-0.2 4,-2.6 2,-0.2 -1,-0.1 0.874 122.1 46.8 -41.5 -47.8 -6.7 13.5 -2.7 35 81 A K H > S+ 0 0 132 2,-0.2 4,-2.8 1,-0.2 5,-0.3 0.990 110.5 48.6 -59.4 -66.2 -9.2 13.4 0.1 36 82 A E H > S+ 0 0 93 1,-0.3 4,-3.0 2,-0.2 -2,-0.2 0.860 114.2 48.8 -40.9 -47.3 -10.1 9.7 -0.2 37 83 A A H X S+ 0 0 0 -4,-3.2 4,-2.7 2,-0.2 -1,-0.3 0.923 110.9 49.9 -61.7 -46.8 -6.4 9.0 -0.2 38 84 A K H X S+ 0 0 97 -4,-2.6 4,-2.8 -5,-0.3 -2,-0.2 0.955 113.4 44.9 -55.9 -55.0 -5.8 11.3 2.8 39 85 A D H X S+ 0 0 67 -4,-2.8 4,-1.4 2,-0.2 -1,-0.2 0.921 111.0 55.4 -55.6 -48.0 -8.6 9.6 4.8 40 86 A L H >< S+ 0 0 41 -4,-3.0 3,-1.2 -5,-0.3 -1,-0.2 0.947 112.6 40.0 -49.3 -59.8 -7.4 6.2 3.8 41 87 A V H >< S+ 0 0 8 -4,-2.7 3,-1.4 1,-0.3 -1,-0.2 0.879 116.3 51.4 -59.2 -40.1 -3.9 6.7 5.0 42 88 A E H 3< S+ 0 0 115 -4,-2.8 -1,-0.3 1,-0.3 -2,-0.2 0.637 106.5 56.4 -72.5 -14.4 -5.2 8.5 8.1 43 89 A S T << S- 0 0 79 -4,-1.4 -1,-0.3 -3,-1.2 -2,-0.2 0.073 98.7-170.1-104.9 20.8 -7.5 5.6 8.7 44 90 A A < + 0 0 42 -3,-1.4 2,-0.2 -5,-0.1 -31,-0.1 -0.211 59.5 60.7 -57.9 150.3 -4.7 3.1 8.8 45 91 A P S S+ 0 0 91 0, 0.0 2,-0.3 0, 0.0 -32,-0.2 0.562 80.7 145.7 -75.0 157.9 -4.4 0.4 8.8 46 92 A A E -A 12 0A 18 -34,-1.6 -34,-3.1 -2,-0.2 2,-0.2 -0.982 49.4-107.9-156.8 146.3 -6.1 0.1 5.5 47 93 A A E +A 11 0A 44 -2,-0.3 -36,-0.2 -36,-0.2 3,-0.1 -0.549 26.7 177.9 -77.0 140.4 -5.8 -2.1 2.4 48 94 A L E S+ 0 0 20 -38,-2.9 2,-0.3 1,-0.4 -37,-0.2 0.675 70.9 13.7-110.1 -33.2 -4.3 -0.4 -0.7 49 95 A K E -A 10 0A 36 -39,-1.7 -39,-1.8 3,-0.0 -1,-0.4 -0.992 61.6-159.2-146.4 148.3 -4.4 -3.4 -3.1 50 96 A E E S- 0 0 144 -2,-0.3 -41,-0.2 -41,-0.2 -42,-0.1 -0.989 73.4 -5.5-135.2 124.4 -6.1 -6.8 -3.1 51 97 A G E S+ 0 0 30 -2,-0.4 2,-0.3 1,-0.2 -42,-0.2 0.962 87.5 156.0 61.0 56.4 -5.1 -9.8 -5.1 52 98 A V E -A 8 0A 31 -44,-3.2 -44,-1.9 -3,-0.1 -1,-0.2 -0.762 50.7 -80.8-112.2 159.2 -2.4 -8.1 -7.1 53 99 A S >> - 0 0 52 -2,-0.3 4,-2.0 -46,-0.1 3,-0.5 -0.248 35.7-125.4 -57.6 142.3 0.6 -9.6 -8.8 54 100 A K H 3> S+ 0 0 102 1,-0.3 4,-2.9 2,-0.2 5,-0.4 0.905 112.0 58.5 -54.5 -45.0 3.5 -10.3 -6.4 55 101 A D H 3> S+ 0 0 115 1,-0.3 4,-1.2 2,-0.2 -1,-0.3 0.867 109.3 44.3 -54.1 -39.6 5.8 -8.2 -8.7 56 102 A D H <> S+ 0 0 82 -3,-0.5 4,-2.4 2,-0.2 -1,-0.3 0.819 110.9 55.9 -73.9 -32.3 3.4 -5.3 -8.1 57 103 A A H X S+ 0 0 4 -4,-2.0 4,-2.5 1,-0.2 -2,-0.2 0.952 111.6 40.4 -64.6 -51.9 3.3 -6.1 -4.4 58 104 A E H X S+ 0 0 69 -4,-2.9 4,-2.7 1,-0.2 -1,-0.2 0.769 112.9 58.5 -68.9 -26.4 7.0 -5.9 -3.9 59 105 A A H X S+ 0 0 48 -4,-1.2 4,-1.6 -5,-0.4 -2,-0.2 0.946 110.8 39.3 -67.6 -50.2 7.2 -2.9 -6.2 60 106 A L H X S+ 0 0 15 -4,-2.4 4,-2.1 2,-0.2 -2,-0.2 0.917 116.8 51.5 -65.5 -44.9 4.8 -0.9 -4.1 61 107 A K H X S+ 0 0 70 -4,-2.5 4,-2.8 1,-0.2 5,-0.2 0.937 107.1 52.7 -56.5 -50.5 6.3 -2.2 -0.9 62 108 A K H X S+ 0 0 112 -4,-2.7 4,-2.5 1,-0.3 -1,-0.2 0.869 108.5 51.7 -53.7 -39.7 9.8 -1.3 -2.1 63 109 A A H X S+ 0 0 47 -4,-1.6 4,-1.4 2,-0.2 -1,-0.3 0.894 109.5 49.1 -65.7 -41.3 8.5 2.2 -2.7 64 110 A L H X>S+ 0 0 3 -4,-2.1 4,-2.2 1,-0.2 5,-1.1 0.921 113.0 47.0 -62.4 -45.7 7.1 2.5 0.8 65 111 A E H <5S+ 0 0 121 -4,-2.8 -2,-0.2 3,-0.2 -1,-0.2 0.862 105.7 59.4 -66.4 -37.5 10.3 1.3 2.3 66 112 A E H <5S+ 0 0 173 -4,-2.5 -1,-0.2 -5,-0.2 -2,-0.2 0.861 113.1 38.8 -57.3 -37.7 12.3 3.7 0.1 67 113 A A H <5S- 0 0 29 -4,-1.4 -1,-0.2 -3,-0.3 -2,-0.2 0.786 125.1-105.2 -83.0 -30.7 10.4 6.5 1.7 68 114 A G T <5 + 0 0 42 -4,-2.2 -51,-0.7 1,-0.2 2,-0.3 0.837 68.7 136.8 103.8 60.2 10.4 4.9 5.1 69 115 A A < - 0 0 16 -5,-1.1 2,-0.6 -8,-0.2 -54,-0.2 -0.817 53.1-109.7-129.8 169.0 7.0 3.4 5.8 70 116 A E E -B 14 0A 112 -56,-2.9 -57,-1.6 -2,-0.3 -56,-1.6 -0.907 35.9-177.3-107.4 121.1 5.5 0.2 7.2 71 117 A V E -B 12 0A 21 -2,-0.6 2,-0.4 -59,-0.2 -59,-0.2 -0.651 14.5-144.8-110.8 167.5 3.8 -2.1 4.7 72 118 A E E -B 11 0A 44 -61,-2.3 -61,-2.9 -2,-0.2 2,-0.5 -0.994 4.2-154.5-137.5 130.0 2.0 -5.4 5.2 73 119 A V E B 10 0A 53 -2,-0.4 -63,-0.2 -63,-0.2 -65,-0.0 -0.905 360.0 360.0-106.0 125.8 1.9 -8.3 2.9 74 120 A K 0 0 138 -65,-2.4 -65,-2.4 -2,-0.5 -2,-0.0 -0.746 360.0 360.0-130.2 360.0 -1.1 -10.7 3.0