==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-APR-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN/RNA 17-JUN-10 2RRA . COMPND 2 MOLECULE: CDNA FLJ40872 FIS, CLONE TUTER2000283, HIGHLY SIM . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.TSUDA,K.KUWASAKO,M.TAKAHASHI,T.SOMEYA,M.INOUE,T.KIGAWA,T.T . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7009.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 50.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 23.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 17 17.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 103 A G 0 0 130 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-176.8 -32.1 15.6 11.3 2 104 A S + 0 0 134 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.365 360.0 157.0 -66.7 140.5 -28.4 16.3 11.8 3 105 A S + 0 0 100 -2,-0.1 2,-0.3 5,-0.1 0, 0.0 -0.966 8.9 164.8-164.4 143.8 -26.2 16.9 8.6 4 106 A G >> - 0 0 32 -2,-0.3 4,-2.3 0, 0.0 3,-1.1 -0.935 43.0 -90.9-166.3 146.2 -22.9 18.6 7.6 5 107 A S T 34 S- 0 0 126 -2,-0.3 -2,-0.0 1,-0.3 0, 0.0 -0.339 113.0 -1.7 -58.8 125.5 -20.3 18.8 4.8 6 108 A S T 34 S+ 0 0 75 5,-0.2 -1,-0.3 2,-0.1 87,-0.0 0.253 121.9 80.1 68.0 -7.9 -17.5 16.2 5.3 7 109 A G T <4 S+ 0 0 57 -3,-1.1 -2,-0.2 87,-0.0 2,-0.2 0.784 75.4 82.6 -87.5 -34.6 -19.2 15.1 8.6 8 110 A N < - 0 0 51 -4,-2.3 3,-0.2 1,-0.1 -2,-0.1 -0.503 61.0-171.7 -67.1 138.3 -21.7 13.0 6.6 9 111 A R + 0 0 213 -2,-0.2 -1,-0.1 1,-0.1 84,-0.0 0.139 68.6 73.2-127.8 17.2 -20.2 9.5 5.7 10 112 A A S S+ 0 0 100 1,-0.2 -1,-0.1 2,-0.0 -2,-0.0 -0.230 99.0 48.8-121.7 36.4 -22.8 7.9 3.2 11 113 A N S S+ 0 0 98 -3,-0.2 -1,-0.2 2,-0.0 -5,-0.2 -0.263 77.1 174.1-177.0 60.5 -21.8 10.3 0.3 12 114 A P - 0 0 46 0, 0.0 80,-0.1 0, 0.0 81,-0.1 -0.137 15.2-150.5 -76.9 176.3 -17.9 10.3 -0.1 13 115 A D - 0 0 100 78,-0.1 -2,-0.0 79,-0.1 77,-0.0 -0.978 40.6 -59.2-150.2 151.9 -15.7 12.0 -2.8 14 116 A P + 0 0 72 0, 0.0 2,-0.3 0, 0.0 53,-0.1 0.089 60.5 153.7 -45.9 134.9 -12.2 11.2 -4.3 15 117 A N - 0 0 39 52,-0.2 77,-0.1 2,-0.1 49,-0.1 -0.973 53.1-123.9-158.4 141.6 -9.2 11.1 -2.0 16 118 A C S S+ 0 0 42 -2,-0.3 48,-2.4 75,-0.1 2,-0.4 0.801 100.2 75.5 -55.8 -31.7 -5.7 9.4 -2.0 17 119 A C E -A 63 0A 13 46,-0.2 75,-2.8 75,-0.2 2,-0.3 -0.739 69.1-169.8 -85.0 131.3 -6.8 7.9 1.4 18 120 A L E -AB 62 91A 0 44,-2.7 44,-2.9 -2,-0.4 2,-0.3 -0.946 14.0-140.7-118.3 144.3 -9.4 5.1 1.3 19 121 A G E -AB 61 90A 0 71,-2.8 71,-1.9 -2,-0.3 2,-0.4 -0.807 13.0-159.6 -99.4 145.8 -11.4 3.5 4.2 20 122 A V E -AB 60 89A 0 40,-3.2 40,-2.6 -2,-0.3 2,-0.3 -0.996 11.8-173.3-132.5 128.7 -12.0 -0.3 4.3 21 123 A F E +AB 59 88A 64 67,-2.6 67,-2.4 -2,-0.4 38,-0.2 -0.933 53.5 42.5-133.8 145.1 -14.9 -1.8 6.3 22 124 A G S S+ 0 0 22 36,-1.8 37,-0.2 -2,-0.3 -1,-0.1 0.498 72.4 165.9 101.7 9.1 -16.1 -5.4 7.3 23 125 A L - 0 0 5 35,-1.9 2,-0.2 -3,-0.2 -1,-0.2 -0.100 38.3-114.0 -66.0 150.4 -12.7 -6.9 8.1 24 126 A S > - 0 0 19 58,-0.3 3,-1.9 61,-0.1 -1,-0.1 -0.563 27.0-119.2 -75.5 146.1 -11.9 -10.2 10.0 25 127 A L T 3 S+ 0 0 104 1,-0.3 31,-0.3 -2,-0.2 -1,-0.1 0.630 112.3 58.8 -64.5 -15.0 -10.1 -9.8 13.4 26 128 A Y T 3 S+ 0 0 194 57,-0.1 -1,-0.3 2,-0.1 2,-0.2 0.388 80.3 112.8 -95.8 -0.2 -7.1 -11.8 12.0 27 129 A T < - 0 0 12 -3,-1.9 2,-0.3 55,-0.1 29,-0.1 -0.520 51.9-156.6 -71.7 139.4 -6.4 -9.4 9.1 28 130 A T > - 0 0 45 -2,-0.2 4,-2.0 1,-0.1 3,-0.3 -0.765 31.7-112.0-110.9 163.4 -3.1 -7.4 9.2 29 131 A E H > S+ 0 0 63 -2,-0.3 4,-2.4 1,-0.2 5,-0.1 0.790 120.2 58.9 -59.8 -28.2 -2.0 -4.1 7.6 30 132 A R H > S+ 0 0 200 2,-0.2 4,-2.5 3,-0.2 -1,-0.2 0.875 103.6 49.2 -70.1 -39.0 0.4 -6.3 5.5 31 133 A D H > S+ 0 0 57 -3,-0.3 4,-2.0 2,-0.2 -2,-0.2 0.954 112.8 47.5 -66.1 -47.4 -2.6 -8.3 4.0 32 134 A L H X S+ 0 0 0 -4,-2.0 4,-2.1 1,-0.2 5,-0.3 0.946 112.7 49.7 -57.3 -46.5 -4.4 -5.1 3.2 33 135 A R H X S+ 0 0 117 -4,-2.4 4,-2.4 1,-0.2 -2,-0.2 0.903 111.2 48.0 -63.4 -39.0 -1.2 -3.7 1.6 34 136 A E H < S+ 0 0 137 -4,-2.5 4,-0.3 1,-0.2 -1,-0.2 0.841 115.6 46.1 -68.4 -29.9 -0.6 -6.8 -0.5 35 137 A V H < S+ 0 0 22 -4,-2.0 -2,-0.2 -3,-0.2 -1,-0.2 0.789 122.3 34.1 -81.3 -30.2 -4.3 -6.8 -1.7 36 138 A F H >< S+ 0 0 0 -4,-2.1 3,-1.8 -5,-0.2 4,-0.3 0.723 101.3 71.8-100.4 -26.3 -4.4 -3.0 -2.5 37 139 A S G >< S+ 0 0 47 -4,-2.4 3,-1.0 -5,-0.3 -3,-0.1 0.708 83.5 72.9 -71.1 -14.0 -0.9 -2.3 -3.8 38 140 A K G 3 S+ 0 0 144 -4,-0.3 -1,-0.3 1,-0.2 -2,-0.1 0.647 96.5 52.6 -67.3 -13.5 -1.7 -4.3 -7.1 39 141 A Y G < S- 0 0 37 -3,-1.8 -1,-0.2 1,-0.3 -2,-0.2 0.502 128.0 -61.8 -97.0 -9.1 -3.9 -1.2 -7.9 40 142 A G S < S- 0 0 18 -3,-1.0 -1,-0.3 -4,-0.3 2,-0.2 -0.904 77.8 -25.6 148.3-175.8 -1.0 1.4 -7.4 41 143 A P - 0 0 58 0, 0.0 24,-2.2 0, 0.0 2,-0.4 -0.424 48.3-167.3 -75.4 136.0 1.5 3.0 -5.0 42 144 A I E -C 64 0A 4 22,-0.3 22,-0.3 -2,-0.2 3,-0.1 -0.985 16.4-173.1-128.8 122.7 0.8 3.0 -1.2 43 145 A A E S- 0 0 71 20,-2.2 2,-0.3 -2,-0.4 21,-0.1 0.785 72.5 -9.3 -82.6 -31.3 2.7 5.0 1.5 44 146 A D E -C 63 0A 87 19,-1.1 19,-2.7 2,-0.0 2,-0.3 -0.982 50.0-155.3-164.3 162.2 0.9 3.5 4.5 45 147 A V E -C 62 0A 11 -2,-0.3 2,-0.4 17,-0.2 17,-0.2 -0.981 14.1-173.9-148.0 137.1 -1.9 1.2 5.9 46 148 A S E -C 61 0A 23 15,-2.6 15,-2.5 -2,-0.3 2,-0.3 -0.969 12.8-153.0-144.1 120.0 -3.6 1.4 9.3 47 149 A I E -C 60 0A 4 -2,-0.4 2,-0.4 13,-0.3 13,-0.3 -0.665 27.0-121.7 -85.9 146.6 -6.2 -0.9 11.0 48 150 A V E - 0 0 25 11,-2.9 9,-2.7 -2,-0.3 11,-0.5 -0.816 34.7-166.6 -97.5 129.1 -8.4 0.7 13.7 49 151 A Y E -C 56 0A 103 -2,-0.4 7,-0.2 7,-0.3 2,-0.2 -0.794 24.2-101.3-122.1 154.7 -8.3 -1.0 17.2 50 152 A D > - 0 0 58 5,-2.7 4,-1.3 -2,-0.3 -1,-0.0 -0.505 25.2-138.9 -71.9 140.2 -10.1 -1.1 20.5 51 153 A Q T 4 S+ 0 0 191 -2,-0.2 -1,-0.1 1,-0.2 -2,-0.0 0.715 97.5 35.9 -77.2 -22.2 -8.5 1.0 23.4 52 154 A Q T 4 S+ 0 0 181 3,-0.1 -1,-0.2 1,-0.0 -2,-0.0 0.725 132.3 22.6-104.2 -27.8 -9.1 -1.6 26.2 53 155 A S T 4 S- 0 0 47 2,-0.1 -2,-0.2 0, 0.0 3,-0.1 0.503 87.6-134.2-120.9 -12.6 -8.6 -5.0 24.5 54 156 A R < + 0 0 206 -4,-1.3 2,-0.1 1,-0.2 -3,-0.1 0.582 57.4 139.7 61.8 15.5 -6.4 -4.0 21.4 55 157 A R - 0 0 163 1,-0.1 -5,-2.7 -6,-0.1 -1,-0.2 -0.474 63.4 -90.8 -74.6 153.1 -8.7 -6.2 19.0 56 158 A S E - C 0 49A 16 -31,-0.3 -7,-0.3 -7,-0.2 -1,-0.1 -0.408 22.6-143.6 -61.3 142.9 -9.6 -4.9 15.5 57 159 A R E - 0 0 154 -9,-2.7 -8,-0.1 2,-0.4 -1,-0.1 0.416 52.4 -99.1 -84.6 -1.4 -12.8 -2.8 15.4 58 160 A G E S+ 0 0 16 -10,-0.4 -35,-1.9 1,-0.3 -36,-1.8 0.454 94.6 84.8 92.9 7.7 -13.6 -4.3 11.9 59 161 A F E +A 21 0A 53 -11,-0.5 -11,-2.9 -38,-0.2 -2,-0.4 -0.940 44.6 166.9-144.6 160.9 -12.3 -1.3 9.9 60 162 A A E -AC 20 47A 0 -40,-2.6 -40,-3.2 -2,-0.3 2,-0.3 -0.925 23.0-124.8-159.9 172.3 -9.0 0.2 8.4 61 163 A F E -AC 19 46A 46 -15,-2.5 -15,-2.6 -42,-0.3 2,-0.4 -0.972 8.8-154.5-141.3 149.0 -7.6 2.8 6.0 62 164 A V E -AC 18 45A 0 -44,-2.9 -44,-2.7 -2,-0.3 2,-0.8 -0.994 9.1-151.9-132.6 120.8 -5.2 2.6 3.1 63 165 A Y E -AC 17 44A 25 -19,-2.7 -20,-2.2 -2,-0.4 -19,-1.1 -0.829 13.9-167.8-106.7 98.3 -3.1 5.7 2.0 64 166 A F E - C 0 42A 11 -48,-2.4 -22,-0.3 -2,-0.8 3,-0.1 -0.380 27.6-131.7 -74.7 161.0 -2.2 5.8 -1.7 65 167 A E S S+ 0 0 138 -24,-2.2 2,-0.3 1,-0.1 -23,-0.1 0.299 93.4 41.0 -90.3 6.7 0.4 8.2 -3.3 66 168 A N > - 0 0 61 -25,-0.4 4,-1.4 -50,-0.2 3,-0.2 -0.957 68.3-141.6-158.6 135.2 -2.1 9.1 -6.0 67 169 A V H > S+ 0 0 55 -2,-0.3 4,-2.2 1,-0.2 -52,-0.2 0.797 102.7 57.0 -68.4 -29.6 -5.9 9.9 -6.2 68 170 A D H > S+ 0 0 94 2,-0.2 4,-1.1 1,-0.2 -1,-0.2 0.815 107.2 47.4 -78.6 -26.0 -6.4 8.1 -9.6 69 171 A D H > S+ 0 0 45 -3,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.809 111.8 51.4 -78.7 -29.4 -5.0 4.8 -8.2 70 172 A A H X S+ 0 0 0 -4,-1.4 4,-2.6 2,-0.2 -2,-0.2 0.905 106.5 53.9 -69.4 -39.7 -7.3 5.2 -5.1 71 173 A K H X S+ 0 0 83 -4,-2.2 4,-0.8 2,-0.2 -2,-0.2 0.846 111.2 47.6 -61.1 -34.0 -10.2 5.7 -7.6 72 174 A E H >X S+ 0 0 83 -4,-1.1 4,-1.7 2,-0.2 3,-1.2 0.992 114.2 43.5 -66.0 -63.1 -9.2 2.3 -9.2 73 175 A A H 3X S+ 0 0 0 -4,-2.4 4,-2.6 1,-0.3 5,-0.3 0.830 107.8 60.1 -56.6 -37.2 -8.8 0.4 -5.9 74 176 A K H 3X S+ 0 0 33 -4,-2.6 4,-0.5 1,-0.2 -1,-0.3 0.836 112.9 37.9 -61.1 -34.4 -12.1 1.9 -4.4 75 177 A E H << S+ 0 0 131 -3,-1.2 -1,-0.2 -4,-0.8 -2,-0.2 0.734 118.1 51.4 -87.8 -24.2 -14.1 0.3 -7.4 76 178 A R H < S+ 0 0 152 -4,-1.7 -2,-0.2 1,-0.1 -3,-0.2 0.902 116.1 34.5 -77.4 -46.5 -12.0 -2.9 -7.5 77 179 A A H >< S+ 0 0 0 -4,-2.6 3,-2.0 -5,-0.1 2,-0.6 0.581 83.4 111.7 -95.9 -11.1 -12.2 -4.0 -3.8 78 180 A N T 3< S+ 0 0 74 -4,-0.5 10,-0.2 -5,-0.3 -58,-0.0 -0.523 95.8 8.9 -66.7 111.1 -15.7 -2.8 -2.8 79 181 A G T 3 S+ 0 0 53 8,-2.8 -1,-0.3 -2,-0.6 9,-0.2 0.450 99.0 132.4 90.0 7.1 -17.6 -6.2 -2.3 80 182 A M < - 0 0 46 -3,-2.0 7,-2.8 7,-0.3 2,-0.4 -0.336 56.9-113.5 -74.7 169.0 -14.5 -8.4 -2.5 81 183 A E E +D 86 0B 121 5,-0.2 2,-0.4 -2,-0.1 5,-0.2 -0.890 30.8 178.6-111.1 137.1 -13.8 -11.2 0.1 82 184 A L E > S-D 85 0B 23 3,-2.8 3,-1.8 -2,-0.4 -58,-0.3 -0.978 72.8 -16.8-143.1 116.8 -10.9 -11.2 2.6 83 185 A D T 3 S- 0 0 103 -2,-0.4 -57,-0.1 1,-0.3 3,-0.1 0.711 129.0 -52.2 58.1 25.1 -10.3 -13.9 5.2 84 186 A G T 3 S+ 0 0 47 1,-0.3 2,-0.4 -60,-0.1 -1,-0.3 0.415 119.8 102.8 92.0 2.8 -13.9 -15.1 4.8 85 187 A R E < S-D 82 0B 133 -3,-1.8 -3,-2.8 -61,-0.0 -1,-0.3 -0.921 71.8-123.9-110.2 139.3 -15.6 -11.7 5.3 86 188 A R E -D 81 0B 141 -2,-0.4 2,-0.3 -5,-0.2 -5,-0.2 -0.631 30.4-152.3 -72.4 138.8 -16.9 -9.4 2.5 87 189 A I - 0 0 0 -7,-2.8 -8,-2.8 -2,-0.3 -7,-0.3 -0.874 6.7-153.9-111.8 149.3 -15.3 -5.9 2.6 88 190 A R E -B 21 0A 174 -67,-2.4 -67,-2.6 -2,-0.3 2,-0.3 -0.884 13.1-159.2-117.6 153.1 -16.7 -2.5 1.5 89 191 A V E +B 20 0A 0 -2,-0.3 2,-0.3 -15,-0.2 -69,-0.2 -0.998 16.9 158.1-143.7 136.1 -14.5 0.5 0.4 90 192 A D E -B 19 0A 56 -71,-1.9 -71,-2.8 -2,-0.3 2,-0.1 -0.954 44.4 -84.2-150.4 162.0 -14.9 4.3 0.0 91 193 A F E -B 18 0A 27 -2,-0.3 2,-0.3 -73,-0.2 -73,-0.3 -0.458 53.0-100.2 -69.8 142.5 -12.8 7.5 -0.1 92 194 A S - 0 0 7 -75,-2.8 -75,-0.2 -77,-0.1 -79,-0.1 -0.465 27.3-169.4 -66.5 125.9 -11.7 9.1 3.2 93 195 A I S S+ 0 0 49 -2,-0.3 2,-0.3 1,-0.2 -1,-0.1 0.691 82.0 8.3 -83.2 -19.9 -13.9 12.1 4.3 94 196 A T S S- 0 0 95 -87,-0.0 2,-0.3 -77,-0.0 -1,-0.2 -0.923 75.9-171.8-156.5 156.0 -11.3 12.9 7.1 95 197 A K - 0 0 111 -2,-0.3 -78,-0.0 2,-0.2 -34,-0.0 -0.992 35.5-118.0-158.5 158.9 -7.8 11.5 7.9 96 198 A R S S+ 0 0 169 -2,-0.3 -1,-0.1 2,-0.0 2,-0.0 0.872 89.7 83.1 -70.7 -40.5 -4.9 11.5 10.4 97 199 A P + 0 0 56 0, 0.0 2,-0.3 0, 0.0 -2,-0.2 -0.285 58.3 176.3 -58.6 150.2 -2.3 13.0 7.9 98 200 A H 0 0 165 1,-0.1 -2,-0.0 -2,-0.0 0, 0.0 -0.971 360.0 360.0-161.0 146.8 -2.2 16.9 7.5 99 201 A T 0 0 196 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 0.467 360.0 360.0-145.9 360.0 -0.1 19.5 5.6