==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-APR-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 17-JUN-10 2RRB . COMPND 2 MOLECULE: CDNA FLJ40872 FIS, CLONE TUTER2000283, HIGHLY SIM . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.TSUDA,K.KUWASAKO,M.TAKAHASHI,T.SOMEYA,M.INOUE,T.KIGAWA,T.T . 96 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6716.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 54.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 24 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 7.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 106 A G 0 0 119 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-159.4 16.9 -9.2 3.9 2 107 A P - 0 0 144 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.187 360.0-176.3 -58.0 151.2 17.4 -7.6 0.5 3 108 A L + 0 0 93 1,-0.1 0, 0.0 3,-0.1 0, 0.0 -0.887 23.7 162.2-158.0 117.7 15.0 -8.5 -2.4 4 109 A G + 0 0 72 -2,-0.3 -1,-0.1 1,-0.1 0, 0.0 0.586 69.5 75.4-104.4 -18.7 15.1 -7.5 -6.2 5 110 A S S S+ 0 0 122 1,-0.0 2,-0.6 2,-0.0 -1,-0.1 0.602 77.0 83.2 -78.3 -14.1 12.8 -10.2 -7.6 6 111 A R + 0 0 96 2,-0.0 2,-0.3 81,-0.0 -3,-0.1 -0.849 57.2 120.5 -99.3 117.0 9.4 -8.8 -6.4 7 112 A A - 0 0 64 -2,-0.6 80,-0.1 80,-0.0 -3,-0.0 -0.969 49.6-143.6-164.1 158.5 7.8 -6.1 -8.5 8 113 A N - 0 0 68 -2,-0.3 2,-2.1 81,-0.0 80,-0.6 -0.770 18.4-168.7-128.4 84.4 4.6 -5.2 -10.5 9 114 A P + 0 0 124 0, 0.0 78,-0.0 0, 0.0 -2,-0.0 -0.447 55.8 95.7 -80.8 71.8 5.8 -3.2 -13.6 10 115 A D S S- 0 0 98 -2,-2.1 77,-0.0 2,-0.1 0, 0.0 -0.678 71.7-131.1-159.5 94.6 2.4 -2.0 -14.8 11 116 A P + 0 0 66 0, 0.0 2,-0.3 0, 0.0 53,-0.1 -0.186 38.1 148.8 -59.3 141.8 1.2 1.5 -13.7 12 117 A N - 0 0 44 52,-0.2 77,-0.1 2,-0.1 51,-0.1 -0.966 57.9-105.7-162.5 159.6 -2.2 2.2 -12.2 13 118 A C S S+ 0 0 37 -2,-0.3 48,-2.7 49,-0.1 2,-0.5 0.647 100.1 81.4 -66.6 -15.4 -3.9 4.5 -9.6 14 119 A C E -AB 60 89A 13 75,-0.5 75,-2.6 46,-0.2 2,-0.4 -0.837 62.0-174.2 -94.1 127.2 -4.1 1.6 -7.1 15 120 A L E -AB 59 88A 0 44,-2.9 44,-3.1 -2,-0.5 2,-0.3 -0.966 16.1-144.7-118.5 138.7 -0.9 0.8 -5.1 16 121 A G E -AB 58 87A 0 71,-2.7 71,-2.1 -2,-0.4 2,-0.4 -0.809 15.3-158.1 -95.4 142.6 -0.3 -2.2 -2.7 17 122 A V E -AB 57 86A 0 40,-3.2 40,-2.7 -2,-0.3 2,-0.3 -0.993 13.6-179.3-131.5 126.5 1.9 -1.5 0.4 18 123 A F E +AB 56 85A 41 67,-2.8 67,-1.8 -2,-0.4 38,-0.2 -0.834 51.3 44.8-132.0 157.7 3.7 -4.2 2.3 19 124 A G S S+ 0 0 28 36,-1.0 37,-0.2 -2,-0.3 -1,-0.1 0.811 75.3 157.3 77.5 31.3 6.1 -4.7 5.3 20 125 A L - 0 0 1 35,-2.4 2,-0.2 -3,-0.2 -1,-0.1 -0.167 42.8-101.0 -77.6 172.3 4.0 -2.4 7.6 21 126 A S > - 0 0 12 61,-0.1 3,-1.1 1,-0.1 34,-0.2 -0.644 21.7-123.3 -87.2 154.9 3.7 -2.2 11.5 22 127 A L T 3 S+ 0 0 102 1,-0.2 31,-0.3 -2,-0.2 -1,-0.1 0.755 118.5 52.6 -65.3 -22.3 0.9 -3.8 13.5 23 128 A Y T 3 S+ 0 0 192 57,-0.1 -1,-0.2 2,-0.1 2,-0.2 0.373 83.3 116.1 -94.0 0.4 0.5 -0.2 14.9 24 129 A T < - 0 0 4 -3,-1.1 2,-0.3 55,-0.1 31,-0.1 -0.508 47.4-168.1 -66.4 139.0 0.3 1.4 11.3 25 130 A T > - 0 0 40 -2,-0.2 4,-2.3 1,-0.0 3,-0.3 -0.823 39.1-105.2-125.1 165.4 -3.1 3.1 10.6 26 131 A E H > S+ 0 0 77 -2,-0.3 4,-2.1 1,-0.2 5,-0.1 0.728 122.3 58.5 -63.2 -22.1 -4.9 4.5 7.5 27 132 A R H > S+ 0 0 163 2,-0.2 4,-2.5 3,-0.2 -1,-0.2 0.906 106.3 46.1 -67.0 -47.3 -4.1 8.0 8.9 28 133 A D H > S+ 0 0 31 -3,-0.3 4,-2.1 2,-0.2 -2,-0.2 0.917 113.4 49.0 -68.6 -40.3 -0.3 7.2 8.9 29 134 A L H X S+ 0 0 0 -4,-2.3 4,-2.9 2,-0.2 5,-0.3 0.954 111.2 49.8 -62.6 -47.3 -0.6 5.8 5.3 30 135 A R H X S+ 0 0 92 -4,-2.1 4,-2.5 1,-0.2 -2,-0.2 0.911 110.5 51.2 -55.0 -41.7 -2.5 8.9 4.3 31 136 A E H < S+ 0 0 134 -4,-2.5 -2,-0.2 1,-0.2 -1,-0.2 0.856 116.1 40.7 -66.7 -34.4 0.3 11.0 5.9 32 137 A V H < S+ 0 0 11 -4,-2.1 3,-0.3 -3,-0.2 -2,-0.2 0.894 124.2 36.0 -74.4 -44.0 3.0 9.1 4.0 33 138 A F H >< S+ 0 0 0 -4,-2.9 3,-1.5 1,-0.2 -2,-0.2 0.704 98.4 72.8 -94.0 -21.8 1.2 8.9 0.6 34 139 A S G >< S+ 0 0 70 -4,-2.5 3,-0.9 -5,-0.3 -1,-0.2 0.648 80.4 79.8 -71.5 -8.6 -0.7 12.3 0.3 35 140 A K G 3 S+ 0 0 129 -3,-0.3 -1,-0.3 1,-0.2 -2,-0.1 0.659 94.1 49.0 -61.2 -18.6 2.7 13.9 -0.3 36 141 A Y G < S- 0 0 23 -3,-1.5 -1,-0.2 1,-0.4 33,-0.2 0.398 123.6 -64.7-111.9 -2.3 2.4 12.7 -4.0 37 142 A G S < S- 0 0 21 -3,-0.9 -1,-0.4 -4,-0.2 2,-0.0 -0.780 77.8 -21.6 139.8 179.4 -1.2 13.9 -4.9 38 143 A P - 0 0 65 0, 0.0 24,-2.4 0, 0.0 2,-0.4 -0.281 54.0-149.0 -60.2 134.9 -5.0 13.5 -4.1 39 144 A I E -C 61 0A 42 22,-0.3 22,-0.3 1,-0.1 3,-0.1 -0.896 16.6-169.1-109.6 131.6 -6.1 10.2 -2.4 40 145 A A E S- 0 0 71 20,-2.6 2,-0.3 -2,-0.4 21,-0.2 0.869 71.0 -38.8 -81.3 -43.0 -9.5 8.6 -2.9 41 146 A D E -C 60 0A 79 19,-1.4 19,-2.6 2,-0.0 -1,-0.3 -0.969 45.5-139.7-167.7 176.2 -9.1 6.1 -0.0 42 147 A V E -C 59 0A 3 -2,-0.3 2,-0.4 17,-0.2 17,-0.2 -0.965 15.8-170.9-149.1 137.5 -6.7 3.7 1.9 43 148 A S E -C 58 0A 53 15,-2.7 15,-2.6 -2,-0.3 2,-0.3 -0.984 9.1-153.5-137.6 122.1 -7.4 0.2 3.3 44 149 A I E -C 57 0A 16 -2,-0.4 2,-0.4 13,-0.2 13,-0.3 -0.675 24.2-120.3 -89.5 146.9 -5.3 -2.0 5.7 45 150 A V E - 0 0 37 11,-2.9 9,-2.5 -2,-0.3 11,-0.4 -0.789 32.2-170.3 -92.3 130.1 -5.6 -5.9 5.6 46 151 A Y E -C 53 0A 83 -2,-0.4 7,-0.2 7,-0.3 2,-0.2 -0.882 27.3-102.1-122.8 149.2 -6.7 -7.5 8.9 47 152 A D > - 0 0 22 5,-2.8 4,-1.0 -2,-0.3 7,-0.0 -0.453 22.8-140.9 -71.1 138.7 -6.9 -11.2 10.1 48 153 A Q T 4 S+ 0 0 118 -2,-0.2 -1,-0.1 2,-0.1 -2,-0.0 0.397 97.0 28.8 -89.5 4.3 -10.4 -12.7 10.2 49 154 A Q T 4 S+ 0 0 184 3,-0.1 -1,-0.1 0, 0.0 -2,-0.0 0.594 130.9 32.1-126.2 -36.5 -10.0 -14.7 13.5 50 155 A S T 4 S- 0 0 87 2,-0.1 -2,-0.1 3,-0.0 3,-0.1 0.557 88.8-142.7-101.0 -13.4 -7.4 -12.6 15.6 51 156 A R < + 0 0 158 -4,-1.0 -3,-0.1 1,-0.2 2,-0.1 0.430 57.0 126.3 63.2 6.0 -8.4 -9.1 14.2 52 157 A R S S- 0 0 128 1,-0.1 -5,-2.8 -6,-0.1 -1,-0.2 -0.349 70.9 -86.5 -74.4 164.8 -4.8 -7.8 14.2 53 158 A S E - C 0 46A 4 -31,-0.3 -7,-0.3 -7,-0.2 -1,-0.1 -0.408 22.7-144.1 -65.1 150.8 -3.1 -6.3 11.0 54 159 A R E - 0 0 124 -9,-2.5 -8,-0.1 2,-0.3 -1,-0.1 0.341 50.5-103.2 -94.3 2.6 -1.5 -8.8 8.5 55 160 A G E S+ 0 0 9 -10,-0.4 -35,-2.4 1,-0.3 -36,-1.0 0.639 90.0 84.6 85.9 18.5 1.3 -6.2 7.8 56 161 A F E +A 18 0A 62 -11,-0.4 -11,-2.9 -38,-0.2 -2,-0.3 -0.968 44.8 169.8-151.4 163.7 -0.0 -4.9 4.4 57 162 A A E -AC 17 44A 0 -40,-2.7 -40,-3.2 -2,-0.3 2,-0.3 -0.924 26.4-116.8-159.6 173.4 -2.5 -2.5 2.8 58 163 A F E -AC 16 43A 57 -15,-2.6 -15,-2.7 -2,-0.3 2,-0.4 -0.992 17.7-157.7-134.1 137.9 -3.7 -0.8 -0.4 59 164 A V E -AC 15 42A 0 -44,-3.1 -44,-2.9 -2,-0.3 2,-0.5 -0.947 6.4-155.2-120.0 133.8 -3.7 3.0 -1.3 60 165 A Y E -AC 14 41A 72 -19,-2.6 -20,-2.6 -2,-0.4 -19,-1.4 -0.938 8.4-165.0-121.7 110.1 -6.0 4.5 -3.9 61 166 A F E - C 0 39A 7 -48,-2.7 -22,-0.3 -2,-0.5 -48,-0.1 -0.519 29.0-125.1 -88.2 159.4 -5.1 7.7 -5.8 62 167 A E S S+ 0 0 134 -24,-2.4 2,-0.3 -2,-0.2 -23,-0.1 0.787 96.3 23.9 -70.1 -27.3 -7.4 10.0 -7.9 63 168 A N S >> S- 0 0 76 -25,-0.4 4,-1.5 -50,-0.1 3,-0.5 -0.974 73.9-123.7-141.2 151.1 -5.0 9.6 -10.9 64 169 A V H 3> S+ 0 0 65 -2,-0.3 4,-2.1 1,-0.2 -52,-0.2 0.812 110.6 60.8 -63.2 -29.8 -2.3 7.2 -12.2 65 170 A D H 3> S+ 0 0 103 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.826 103.0 49.9 -70.8 -29.5 0.3 10.0 -12.3 66 171 A D H <> S+ 0 0 24 -3,-0.5 4,-2.4 2,-0.2 -1,-0.2 0.909 112.1 47.9 -72.7 -41.2 -0.0 10.6 -8.5 67 172 A A H X S+ 0 0 0 -4,-1.5 4,-2.7 2,-0.2 -2,-0.2 0.852 109.0 54.8 -66.6 -35.3 0.4 6.8 -7.9 68 173 A K H X S+ 0 0 73 -4,-2.1 4,-1.8 2,-0.2 -2,-0.2 0.956 110.0 45.7 -61.9 -49.2 3.5 6.8 -10.3 69 174 A E H X S+ 0 0 66 -4,-1.9 4,-1.0 1,-0.2 -2,-0.2 0.942 114.5 49.0 -58.3 -47.4 5.1 9.6 -8.2 70 175 A A H >X S+ 0 0 0 -4,-2.4 4,-3.0 1,-0.2 3,-0.8 0.915 109.1 51.0 -59.3 -46.7 4.3 7.7 -4.9 71 176 A K H 3X S+ 0 0 40 -4,-2.7 4,-0.7 1,-0.2 -1,-0.2 0.850 112.5 47.7 -63.2 -32.5 5.6 4.3 -6.2 72 177 A E H 3< S+ 0 0 159 -4,-1.8 -1,-0.2 -5,-0.2 -2,-0.2 0.677 122.2 35.0 -78.3 -18.2 9.0 6.1 -7.2 73 178 A R H << S+ 0 0 149 -4,-1.0 -2,-0.2 -3,-0.8 -3,-0.2 0.824 121.2 37.8-105.7 -44.4 9.2 7.9 -3.8 74 179 A A H >< S+ 0 0 0 -4,-3.0 3,-1.8 -5,-0.2 2,-0.4 0.681 81.2 115.6 -88.2 -21.2 7.8 5.6 -1.0 75 180 A N T 3< S+ 0 0 68 -4,-0.7 10,-0.1 -5,-0.5 -58,-0.0 -0.346 91.5 0.2 -62.1 112.9 9.1 2.2 -2.2 76 181 A G T 3 S+ 0 0 50 -2,-0.4 -1,-0.3 1,-0.2 9,-0.1 0.341 98.6 128.0 93.2 -1.8 11.6 0.8 0.3 77 182 A M < - 0 0 61 -3,-1.8 7,-1.8 6,-0.1 2,-0.4 0.015 60.6 -99.0 -68.1-176.4 11.5 3.7 2.9 78 183 A E E +D 83 0B 101 5,-0.2 2,-0.3 3,-0.0 5,-0.2 -0.916 34.0 177.4-114.8 136.5 10.9 3.3 6.7 79 184 A L E > S-D 82 0B 25 3,-2.7 3,-2.0 -2,-0.4 -55,-0.1 -0.988 76.2 -10.2-140.6 122.5 7.5 3.9 8.6 80 185 A D T 3 S- 0 0 105 -2,-0.3 3,-0.1 1,-0.3 -57,-0.1 0.709 128.2 -59.2 60.4 22.7 7.1 3.3 12.4 81 186 A G T 3 S+ 0 0 55 1,-0.3 2,-0.4 -60,-0.1 -1,-0.3 0.358 116.6 115.0 85.5 -1.7 10.6 1.6 12.4 82 187 A R E < -D 79 0B 124 -3,-2.0 -3,-2.7 -61,-0.0 2,-0.7 -0.830 67.0-130.4-100.9 133.8 9.4 -1.0 9.8 83 188 A R E -D 78 0B 190 -2,-0.4 -5,-0.2 -5,-0.2 -6,-0.1 -0.783 32.8-160.9 -94.2 109.4 11.0 -1.0 6.3 84 189 A I - 0 0 10 -7,-1.8 2,-0.3 -2,-0.7 -65,-0.2 -0.041 13.8-147.0 -81.0-179.5 8.2 -1.1 3.7 85 190 A R E -B 18 0A 61 -67,-1.8 -67,-2.8 -10,-0.1 2,-0.4 -0.964 12.0-160.1-149.9 146.7 7.8 -2.1 -0.0 86 191 A V E +B 17 0A 0 -2,-0.3 2,-0.3 -69,-0.2 -69,-0.2 -0.998 16.0 159.5-139.4 133.4 5.4 -0.5 -2.6 87 192 A D E -B 16 0A 6 -71,-2.1 -71,-2.7 -2,-0.4 2,-0.1 -0.967 41.8 -89.4-149.1 158.0 4.1 -1.8 -6.0 88 193 A F E -B 15 0A 17 -80,-0.6 -73,-0.3 -2,-0.3 2,-0.2 -0.383 44.5-175.9 -69.2 150.9 1.2 -1.2 -8.5 89 194 A S E -B 14 0A 23 -75,-2.6 -75,-0.5 -77,-0.1 2,-0.3 -0.870 12.4-144.6-142.9 170.4 -2.1 -3.2 -8.1 90 195 A I - 0 0 105 -2,-0.2 2,-0.1 -77,-0.1 -78,-0.0 -0.961 18.6-113.5-140.7 155.6 -5.5 -3.7 -9.9 91 196 A T - 0 0 111 -2,-0.3 2,-0.3 1,-0.0 -77,-0.0 -0.413 29.0-148.5 -83.4 163.1 -9.2 -4.4 -8.9 92 197 A K - 0 0 180 -2,-0.1 -1,-0.0 0, 0.0 0, 0.0 -0.897 13.1-175.1-135.3 160.5 -11.1 -7.7 -9.7 93 198 A R - 0 0 228 -2,-0.3 -2,-0.0 2,-0.0 0, 0.0 -0.963 33.4-100.1-157.6 137.1 -14.7 -8.8 -10.5 94 199 A P + 0 0 120 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.232 41.9 178.1 -57.7 150.2 -16.5 -12.2 -11.0 95 200 A H 0 0 177 1,-0.1 -2,-0.0 0, 0.0 0, 0.0 -0.975 360.0 360.0-160.0 143.0 -17.2 -13.4 -14.6 96 201 A T 0 0 198 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 0.475 360.0 360.0-147.5 360.0 -18.7 -16.5 -16.3