==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HORMONE/GROWTH FACTOR 11-DEC-03 1RU5 . COMPND 2 MOLECULE: PEPTIDE YY; . SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; . AUTHOR M.LERCH,M.MAYRHOFER,O.ZERBE . 36 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4220.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 63.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 22.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 38.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A Y 0 0 283 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 79.9 1.9 -3.1 17.3 2 2 A P + 0 0 128 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.459 360.0 178.0 -75.7 160.2 1.7 -4.1 13.6 3 3 A A + 0 0 76 -2,-0.1 4,-0.1 3,-0.0 3,-0.0 -0.230 28.8 134.5-160.2 49.6 3.9 -2.3 10.9 4 4 A K + 0 0 120 1,-0.1 2,-0.8 2,-0.1 0, 0.0 0.979 65.0 63.2 -65.6 -60.9 3.2 -4.0 7.5 5 5 A P S S- 0 0 25 0, 0.0 -1,-0.1 0, 0.0 15,-0.1 -0.600 88.5-138.5 -71.7 109.3 2.8 -0.8 5.4 6 6 A E - 0 0 132 -2,-0.8 -2,-0.1 1,-0.1 -3,-0.0 -0.190 26.1 -94.6 -61.5 155.8 6.2 1.0 5.6 7 7 A A - 0 0 89 -4,-0.1 -1,-0.1 1,-0.1 2,-0.1 -0.612 41.8-125.4 -74.3 124.0 6.3 4.8 6.1 8 8 A P - 0 0 41 0, 0.0 3,-0.1 0, 0.0 2,-0.1 -0.381 23.3-140.5 -67.1 149.1 6.6 6.7 2.7 9 9 A G S > S+ 0 0 45 1,-0.1 3,-1.7 2,-0.1 4,-0.4 -0.236 71.4 60.4 -94.0-175.2 9.5 9.2 2.3 10 10 A E T 3 S- 0 0 197 1,-0.3 -1,-0.1 2,-0.2 3,-0.1 0.860 133.0 -56.9 64.7 39.8 9.7 12.6 0.5 11 11 A D T 3 S- 0 0 174 -3,-0.1 -1,-0.3 1,-0.1 -2,-0.1 0.432 89.0 -91.9 68.5 4.8 7.0 14.2 2.8 12 12 A A < - 0 0 42 -3,-1.7 -2,-0.2 -5,-0.1 -1,-0.1 0.987 50.7-125.7 47.4 92.5 4.7 11.3 1.5 13 13 A S > - 0 0 50 -4,-0.4 4,-1.3 1,-0.1 3,-0.2 -0.020 20.9-103.7 -56.7 165.3 3.0 12.9 -1.5 14 14 A P H > S+ 0 0 127 0, 0.0 4,-0.6 0, 0.0 -1,-0.1 0.779 126.0 53.5 -65.2 -21.6 -0.8 12.9 -1.9 15 15 A E H >> S+ 0 0 159 2,-0.2 3,-0.7 1,-0.2 4,-0.7 0.872 100.6 59.7 -75.7 -37.9 -0.4 10.0 -4.3 16 16 A E H >> S+ 0 0 59 1,-0.2 4,-1.2 2,-0.2 3,-0.6 0.799 92.0 68.4 -62.4 -28.1 1.6 8.0 -1.8 17 17 A L H >< S+ 0 0 113 -4,-1.3 3,-0.9 1,-0.2 -1,-0.2 0.940 96.4 53.5 -56.0 -42.9 -1.4 8.1 0.6 18 18 A S H XX S+ 0 0 76 -3,-0.7 4,-2.2 -4,-0.6 3,-0.7 0.801 103.2 58.3 -61.4 -25.9 -3.2 5.8 -2.0 19 19 A R H S+ 0 0 171 -3,-0.7 4,-0.8 -2,-0.2 -2,-0.2 0.358 121.2 50.8-154.5 -54.5 -3.8 1.0 1.4 22 22 A A H >X S+ 0 0 70 -4,-2.2 4,-1.6 1,-0.2 3,-0.7 0.916 112.0 51.5 -64.2 -39.5 -3.5 -0.5 -2.1 23 23 A S H 3X S+ 0 0 39 -4,-1.6 4,-2.3 -5,-0.3 -1,-0.2 0.814 95.7 70.5 -67.7 -28.9 0.0 -1.8 -1.1 24 24 A L H 3> S+ 0 0 76 -5,-0.3 4,-0.8 2,-0.2 -1,-0.2 0.836 105.0 41.0 -55.6 -37.1 -1.4 -3.4 2.1 25 25 A R H XX S+ 0 0 197 -4,-0.8 4,-1.3 -3,-0.7 3,-0.7 0.922 113.6 51.2 -73.4 -48.0 -3.1 -6.0 -0.2 26 26 A H H 3X S+ 0 0 139 -4,-1.6 4,-0.5 1,-0.2 -2,-0.2 0.781 103.6 62.7 -61.3 -24.4 -0.1 -6.3 -2.5 27 27 A Y H 3X S+ 0 0 65 -4,-2.3 4,-2.0 2,-0.2 3,-0.5 0.864 97.9 53.8 -66.5 -41.5 1.9 -6.9 0.8 28 28 A L H < S+ 0 0 76 -4,-0.5 3,-1.1 -3,-0.5 -2,-0.2 0.890 105.6 46.7 -81.5 -42.3 4.6 -10.3 -1.1 31 31 A V H 3< S+ 0 0 109 -4,-2.0 3,-0.3 1,-0.2 -2,-0.2 0.628 111.3 55.1 -75.8 -7.9 4.8 -12.7 1.9 32 32 A T T 3< S+ 0 0 105 -4,-0.6 -1,-0.2 -5,-0.2 -2,-0.1 0.114 111.4 41.6-109.8 17.9 3.2 -15.5 -0.2 33 33 A R S < S+ 0 0 209 -3,-1.1 2,-0.3 0, 0.0 -1,-0.2 -0.018 90.6 99.5-157.5 36.4 5.8 -15.4 -3.1 34 34 A Q - 0 0 148 -3,-0.3 2,-0.3 0, 0.0 -4,-0.0 -0.908 37.1-179.3-129.6 156.9 9.3 -15.0 -1.5 35 35 A R 0 0 228 -2,-0.3 0, 0.0 1,-0.1 0, 0.0 -0.819 360.0 360.0-158.6 112.1 12.2 -17.3 -0.7 36 36 A Y 0 0 277 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 0.974 360.0 360.0 50.5 360.0 15.5 -16.2 1.0