==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DE NOVO PROTEIN 14-DEC-03 1RVS . COMPND 2 MOLECULE: TRANSTHYRETIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR C.P.JARONIEC,C.E.MACPHEE,V.S.BAJAJ,M.T.MCMAHON,C.M.DOBSON, . 11 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1694.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A Y 0 0 279 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 163.4 -15.8 -1.6 0.2 2 2 A T + 0 0 142 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.961 360.0 171.2-119.9 131.1 -12.8 0.7 -0.1 3 3 A I - 0 0 156 -2,-0.4 2,-0.4 2,-0.0 0, 0.0 -1.000 17.1-151.7-141.9 138.7 -9.2 -0.1 0.9 4 4 A A - 0 0 100 -2,-0.4 2,-0.4 2,-0.0 -2,-0.0 -0.890 11.7-176.0-112.3 139.9 -5.9 1.6 0.6 5 5 A A - 0 0 95 -2,-0.4 2,-0.5 2,-0.0 -2,-0.0 -0.998 4.9-169.0-137.2 133.1 -2.5 -0.0 0.3 6 6 A L + 0 0 158 -2,-0.4 2,-0.4 2,-0.0 -2,-0.0 -0.979 7.8 174.5-126.7 123.2 1.0 1.5 0.1 7 7 A L - 0 0 155 -2,-0.5 -2,-0.0 2,-0.0 0, 0.0 -0.976 4.1-179.9-131.1 119.3 4.1 -0.4 -0.7 8 8 A S - 0 0 81 -2,-0.4 2,-0.2 2,-0.0 -2,-0.0 -0.919 16.8-150.8-123.5 105.5 7.5 1.3 -1.2 9 9 A P - 0 0 119 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 -0.458 13.4-167.3 -74.6 142.8 10.4 -1.0 -2.1 10 10 A Y 0 0 204 -2,-0.2 -2,-0.0 0, 0.0 0, 0.0 -0.943 360.0 360.0-132.1 153.0 14.0 -0.1 -1.0 11 11 A S 0 0 205 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.881 360.0 360.0-116.6 360.0 17.4 -1.4 -1.9