==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 22-DEC-03 1RYU . COMPND 2 MOLECULE: SWI/SNF-RELATED, MATRIX-ASSOCIATED, ACTIN- . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.KIM,Z.ZHANG,S.UPCHURCH,N.ISERN,Y.CHEN . 120 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7592.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 58.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 45 37.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 158 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 175.3 -18.8 -9.0 -0.4 2 2 A S + 0 0 57 3,-0.0 87,-0.0 86,-0.0 86,-0.0 0.987 360.0 139.0 -55.0 -77.8 -15.6 -6.9 -0.9 3 3 A T - 0 0 93 2,-0.0 2,-0.3 1,-0.0 39,-0.1 0.074 59.6 -65.6 56.4-173.0 -12.9 -9.3 0.4 4 4 A T - 0 0 37 37,-0.1 41,-0.1 1,-0.1 42,-0.1 -0.854 50.3 -99.2-113.8 148.0 -9.6 -9.7 -1.4 5 5 A T - 0 0 23 40,-0.5 39,-0.1 -2,-0.3 36,-0.1 -0.225 34.5-113.1 -59.5 151.3 -8.9 -11.1 -4.8 6 6 A N S S+ 0 0 144 34,-0.1 2,-0.8 1,-0.0 -1,-0.1 0.439 92.3 103.7 -67.1 3.5 -7.7 -14.7 -5.0 7 7 A E + 0 0 87 1,-0.2 35,-0.2 33,-0.1 -2,-0.1 -0.795 42.9 173.9 -93.9 107.8 -4.4 -13.2 -6.2 8 8 A K + 0 0 35 -2,-0.8 34,-0.3 33,-0.2 -1,-0.2 0.937 69.5 44.4 -74.2 -49.7 -1.8 -13.2 -3.4 9 9 A I - 0 0 69 1,-0.1 41,-0.4 32,-0.1 17,-0.1 0.065 59.2-167.1 -80.3-165.9 1.1 -12.0 -5.6 10 10 A T > + 0 0 2 39,-0.1 3,-1.2 12,-0.1 16,-0.1 0.348 69.6 87.6-158.4 -24.8 1.1 -9.2 -8.2 11 11 A K G > S+ 0 0 65 1,-0.3 3,-1.4 2,-0.1 15,-0.1 0.704 78.2 79.5 -58.4 -16.4 4.3 -9.6 -10.2 12 12 A L G 3 S+ 0 0 117 1,-0.3 -1,-0.3 3,-0.1 3,-0.2 0.901 81.0 58.6 -59.8 -46.9 2.1 -11.9 -12.3 13 13 A Y G < S+ 0 0 79 -3,-1.2 -1,-0.3 1,-0.2 2,-0.2 0.347 115.3 40.2 -70.8 12.2 0.3 -9.2 -14.3 14 14 A E < + 0 0 13 -3,-1.4 -1,-0.2 -4,-0.1 3,-0.1 -0.657 54.8 147.1-162.5 99.0 3.8 -8.0 -15.5 15 15 A L S S+ 0 0 118 1,-0.3 2,-0.4 -2,-0.2 -2,-0.1 0.635 74.2 31.5-106.0 -22.2 6.5 -10.4 -16.4 16 16 A G S S+ 0 0 68 1,-0.0 -1,-0.3 2,-0.0 0, 0.0 -0.995 111.7 25.0-143.2 135.5 8.2 -8.3 -19.1 17 17 A G S S+ 0 0 60 -2,-0.4 3,-0.2 -3,-0.1 -1,-0.0 -0.002 108.4 68.0 107.3 -28.5 8.6 -4.6 -19.7 18 18 A E > + 0 0 49 1,-0.1 4,-2.1 2,-0.1 5,-0.2 -0.580 47.7 146.7-124.3 69.0 8.3 -3.5 -16.0 19 19 A P H > S+ 0 0 62 0, 0.0 4,-0.8 0, 0.0 -1,-0.1 0.788 77.1 51.1 -72.6 -27.7 11.5 -4.9 -14.3 20 20 A E H > S+ 0 0 105 2,-0.2 4,-2.1 -3,-0.2 5,-0.2 0.935 116.8 36.9 -74.0 -49.1 11.6 -1.9 -11.9 21 21 A R H > S+ 0 0 73 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.846 114.1 55.8 -73.4 -35.7 8.0 -2.2 -10.8 22 22 A K H X S+ 0 0 71 -4,-2.1 4,-1.2 2,-0.2 -1,-0.2 0.798 110.4 48.3 -66.8 -27.1 7.9 -6.0 -10.8 23 23 A M H X S+ 0 0 109 -4,-0.8 4,-2.2 2,-0.2 -2,-0.2 0.949 113.8 42.8 -75.9 -52.8 10.9 -5.9 -8.5 24 24 A W H X S+ 0 0 63 -4,-2.1 4,-1.9 1,-0.2 -2,-0.2 0.864 117.1 49.2 -60.9 -36.7 9.5 -3.3 -6.0 25 25 A V H X S+ 0 0 1 -4,-2.6 4,-1.3 2,-0.2 -1,-0.2 0.847 110.6 49.9 -71.7 -34.1 6.2 -5.2 -6.2 26 26 A D H X S+ 0 0 85 -4,-1.2 4,-1.8 -5,-0.2 -2,-0.2 0.829 111.1 50.0 -71.8 -32.3 7.9 -8.5 -5.6 27 27 A R H X S+ 0 0 139 -4,-2.2 4,-1.2 2,-0.2 -2,-0.2 0.865 104.9 56.8 -72.1 -38.4 9.7 -6.9 -2.6 28 28 A Y H X S+ 0 0 10 -4,-1.9 4,-1.4 1,-0.2 -1,-0.2 0.867 110.6 44.8 -60.3 -37.1 6.4 -5.6 -1.2 29 29 A L H X S+ 0 0 8 -4,-1.3 4,-1.8 2,-0.2 -1,-0.2 0.871 111.4 51.1 -74.2 -38.8 5.1 -9.2 -1.2 30 30 A A H X S+ 0 0 44 -4,-1.8 4,-0.7 1,-0.2 -2,-0.2 0.684 108.7 56.0 -69.8 -16.8 8.4 -10.5 0.3 31 31 A F H X S+ 0 0 93 -4,-1.2 4,-1.2 2,-0.2 6,-0.2 0.853 105.1 48.4 -81.2 -39.4 7.8 -7.8 2.8 32 32 A T H <>S+ 0 0 5 -4,-1.4 5,-1.6 1,-0.2 6,-0.9 0.861 115.1 45.5 -68.7 -36.2 4.4 -9.0 3.8 33 33 A E H ><5S+ 0 0 96 -4,-1.8 3,-0.8 3,-0.2 -1,-0.2 0.754 101.6 69.8 -76.8 -26.0 5.7 -12.5 4.2 34 34 A E H 3<5S+ 0 0 147 -4,-0.7 -2,-0.2 1,-0.3 -1,-0.2 0.928 110.1 30.9 -57.2 -49.6 8.7 -11.2 6.1 35 35 A K T 3<5S- 0 0 95 -4,-1.2 -1,-0.3 3,-0.0 -2,-0.2 0.278 109.9-120.5 -93.1 10.1 6.6 -10.3 9.1 36 36 A A T < 5 + 0 0 83 -3,-0.8 3,-0.3 1,-0.1 -3,-0.2 0.766 64.3 149.0 55.7 25.2 4.2 -13.2 8.4 37 37 A M S + 0 0 5 3,-0.1 4,-2.2 -41,-0.1 5,-0.2 0.862 21.8 160.2 60.4 36.2 -2.7 -3.2 -9.3 52 52 A L H > S+ 0 0 7 1,-0.2 4,-1.7 2,-0.2 5,-0.2 0.872 70.5 51.1 -56.0 -41.1 0.1 -1.5 -7.5 53 53 A Y H > S+ 0 0 76 2,-0.2 4,-2.1 1,-0.2 5,-0.2 0.944 113.1 43.3 -62.7 -49.3 1.6 -0.4 -10.8 54 54 A R H > S+ 0 0 123 1,-0.2 4,-0.8 2,-0.2 -1,-0.2 0.773 117.5 48.2 -67.2 -25.7 -1.7 1.1 -12.0 55 55 A L H X S+ 0 0 6 -4,-2.2 4,-1.8 2,-0.2 -1,-0.2 0.701 109.3 53.0 -85.9 -22.4 -2.1 2.6 -8.6 56 56 A Y H X S+ 0 0 38 -4,-1.7 4,-1.1 -5,-0.2 -2,-0.2 0.845 112.5 42.8 -80.0 -36.7 1.4 4.0 -8.6 57 57 A V H X S+ 0 0 40 -4,-2.1 4,-1.2 2,-0.2 -2,-0.2 0.754 117.2 48.8 -78.9 -25.6 1.0 5.7 -11.9 58 58 A S H X S+ 0 0 19 -4,-0.8 4,-2.1 -5,-0.2 -2,-0.2 0.878 108.3 51.5 -80.1 -41.3 -2.5 6.9 -10.9 59 59 A V H X>S+ 0 0 8 -4,-1.8 4,-1.4 2,-0.2 5,-1.3 0.839 109.0 52.6 -64.8 -33.3 -1.4 8.2 -7.5 60 60 A K H <5S+ 0 0 125 -4,-1.1 -1,-0.2 2,-0.2 -2,-0.2 0.915 112.2 43.6 -68.0 -43.6 1.3 10.2 -9.2 61 61 A E H <5S+ 0 0 163 -4,-1.2 -2,-0.2 1,-0.2 -1,-0.2 0.806 106.0 64.9 -69.8 -29.8 -1.2 11.8 -11.6 62 62 A I H <5S- 0 0 24 -4,-2.1 -1,-0.2 1,-0.1 -2,-0.2 0.892 123.7 -99.8 -59.5 -41.6 -3.5 12.3 -8.7 63 63 A G T <5 - 0 0 51 -4,-1.4 2,-0.3 -3,-0.2 -3,-0.2 0.142 67.5 -63.2 141.4 -19.9 -1.1 14.7 -7.1 64 64 A G >< - 0 0 16 -5,-1.3 4,-0.6 1,-0.1 -2,-0.1 -0.956 66.2 -58.9 144.8-162.7 0.7 12.7 -4.4 65 65 A L T 4 S+ 0 0 73 -2,-0.3 -1,-0.1 2,-0.2 -5,-0.0 0.725 128.6 52.5 -90.6 -25.5 0.1 10.8 -1.2 66 66 A T T >4 S+ 0 0 87 1,-0.2 3,-1.1 2,-0.1 4,-0.3 0.765 103.3 58.9 -79.8 -26.8 -1.3 13.8 0.7 67 67 A Q G >> S+ 0 0 60 1,-0.3 4,-2.0 2,-0.2 3,-1.2 0.873 98.7 57.6 -69.2 -37.6 -3.8 14.5 -2.1 68 68 A V G 3< S+ 0 0 1 -4,-0.6 -1,-0.3 1,-0.2 -2,-0.1 0.273 103.6 58.0 -77.1 14.2 -5.4 11.0 -1.7 69 69 A N G <4 S+ 0 0 105 -3,-1.1 -1,-0.2 4,-0.1 -2,-0.2 0.497 125.9 8.4-119.1 -10.7 -6.0 11.9 1.9 70 70 A K T <4 S+ 0 0 159 -3,-1.2 -2,-0.2 -4,-0.3 -3,-0.1 0.298 113.1 73.9-152.3 5.8 -8.2 15.1 1.5 71 71 A N S < S- 0 0 78 -4,-2.0 -3,-0.1 -5,-0.1 -4,-0.1 0.172 99.8-117.1-109.9 16.1 -9.0 15.4 -2.2 72 72 A K S >> S+ 0 0 127 1,-0.1 3,-0.7 -5,-0.1 4,-0.5 0.806 70.3 141.5 52.4 31.9 -11.5 12.5 -2.2 73 73 A K H 3> + 0 0 44 -6,-0.5 4,-2.8 1,-0.2 5,-0.3 0.545 49.1 82.9 -79.2 -7.1 -9.2 10.7 -4.6 74 74 A W H 3> S+ 0 0 80 1,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.884 96.3 42.0 -63.0 -38.0 -10.0 7.5 -2.9 75 75 A R H <> S+ 0 0 108 -3,-0.7 4,-1.4 2,-0.2 -1,-0.2 0.750 112.5 57.3 -78.6 -25.5 -13.1 7.2 -5.0 76 76 A E H >X S+ 0 0 88 -4,-0.5 4,-2.1 2,-0.2 3,-0.6 0.980 109.3 40.6 -68.0 -59.3 -11.2 8.4 -8.0 77 77 A L H 3X S+ 0 0 0 -4,-2.8 4,-1.6 1,-0.3 -1,-0.2 0.807 113.0 58.8 -59.3 -29.4 -8.5 5.6 -7.9 78 78 A A H 3<>S+ 0 0 0 -4,-1.0 5,-0.7 -5,-0.3 6,-0.4 0.866 109.0 42.9 -67.0 -36.7 -11.3 3.3 -7.1 79 79 A T H <<5S+ 0 0 57 -4,-1.4 3,-0.4 -3,-0.6 -2,-0.2 0.792 109.6 57.8 -78.3 -30.1 -13.1 4.2 -10.3 80 80 A N H <5S+ 0 0 82 -4,-2.1 -2,-0.2 1,-0.2 -1,-0.2 0.824 114.4 37.1 -69.4 -32.4 -9.8 4.1 -12.3 81 81 A L T <5S- 0 0 8 -4,-1.6 -33,-0.5 -5,-0.2 -1,-0.2 0.342 114.1-119.8-100.6 4.5 -9.3 0.4 -11.2 82 82 A N T 5 + 0 0 96 -3,-0.4 -34,-0.5 -5,-0.1 -35,-0.4 0.948 62.6 138.5 54.0 93.9 -13.0 -0.4 -11.5 83 83 A V S > S+ 0 0 89 -12,-0.0 4,-1.3 0, 0.0 3,-0.9 0.265 122.5 50.6-156.2 -57.4 -19.5 4.4 -1.4 88 88 A S H 3> S+ 0 0 96 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.709 102.1 69.3 -67.0 -19.8 -17.9 1.5 0.4 89 89 A A H 3> S+ 0 0 12 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.851 99.0 47.3 -66.7 -35.6 -15.6 1.2 -2.5 90 90 A A H <> S+ 0 0 6 -3,-0.9 4,-1.2 2,-0.2 -2,-0.2 0.909 114.4 45.3 -72.2 -43.6 -13.9 4.5 -1.7 91 91 A S H X S+ 0 0 87 -4,-1.3 4,-1.5 2,-0.2 -2,-0.2 0.863 116.8 46.6 -67.3 -36.8 -13.5 3.6 2.0 92 92 A S H X S+ 0 0 29 -4,-2.4 4,-2.1 2,-0.2 -2,-0.2 0.932 113.7 46.2 -70.5 -47.7 -12.3 0.1 1.1 93 93 A L H X S+ 0 0 4 -4,-2.4 4,-1.7 1,-0.2 -1,-0.2 0.723 107.9 61.4 -66.8 -21.5 -9.9 1.4 -1.6 94 94 A K H X S+ 0 0 49 -4,-1.2 4,-1.6 2,-0.2 -1,-0.2 0.912 110.0 37.5 -70.4 -44.0 -8.8 4.0 1.0 95 95 A K H X S+ 0 0 126 -4,-1.5 4,-1.5 2,-0.2 -2,-0.2 0.788 118.5 50.9 -77.2 -28.9 -7.6 1.3 3.4 96 96 A Q H X S+ 0 0 29 -4,-2.1 4,-2.1 2,-0.2 -2,-0.2 0.794 107.9 53.5 -77.0 -29.7 -6.3 -0.8 0.6 97 97 A Y H X S+ 0 0 12 -4,-1.7 4,-2.7 2,-0.2 -2,-0.2 0.913 113.7 40.6 -70.1 -44.7 -4.4 2.2 -0.8 98 98 A I H <>S+ 0 0 49 -4,-1.6 5,-0.5 2,-0.2 6,-0.2 0.808 114.5 54.1 -73.2 -30.4 -2.6 2.8 2.4 99 99 A Q H <5S+ 0 0 72 -4,-1.5 -2,-0.2 -5,-0.1 -1,-0.2 0.904 115.4 39.3 -69.1 -41.2 -2.1 -0.9 3.0 100 100 A C H <5S+ 0 0 2 -4,-2.1 -2,-0.2 -58,-0.1 -3,-0.2 0.958 133.6 13.4 -72.2 -54.9 -0.5 -1.2 -0.4 101 101 A L T ><5S+ 0 0 6 -4,-2.7 3,-1.9 -5,-0.2 2,-1.5 0.523 92.6 82.4 -91.7-123.4 1.5 2.0 -0.4 102 102 A Y T 3>5S+ 0 0 166 1,-0.3 4,-1.3 2,-0.2 5,-0.2 -0.342 110.8 32.2 56.6 -88.4 2.1 4.2 2.7 103 103 A A T 34>>S+ 0 0 42 1,-0.3 4,-1.3 2,-0.2 3,-0.8 0.878 105.9 40.7 -59.8 -38.1 5.5 5.2 -0.3 106 106 A C T 3<5S+ 0 0 56 -4,-1.3 6,-0.4 1,-0.2 -1,-0.3 0.664 112.2 57.5 -81.6 -18.8 8.6 5.7 1.7 107 107 A K T 345S+ 0 0 42 -4,-0.5 -1,-0.2 -5,-0.2 -2,-0.2 0.127 116.0 35.1 -96.2 18.5 10.1 2.6 0.1 108 108 A I T <45S+ 0 0 13 -3,-0.8 -2,-0.2 -5,-0.1 -3,-0.2 0.449 132.0 22.3-140.8 -22.6 9.6 4.1 -3.4 109 109 A E T X5S+ 0 0 90 -4,-1.3 4,-1.5 -5,-0.2 2,-0.7 0.741 107.0 70.1-115.8 -51.0 10.2 7.8 -2.9 110 110 A R T 4 S+ 0 0 121 -2,-3.4 2,-1.8 3,-0.5 3,-0.6 0.742 82.7 178.5 51.6 18.8 24.6 12.1 -3.1 118 118 A I T 3 S- 0 0 54 2,-0.5 -1,-0.3 1,-0.3 0, 0.0 -0.312 78.8 -43.1 -55.1 84.0 22.6 11.3 -0.0 119 119 A F T 3 0 0 197 -2,-1.8 -1,-0.3 -3,-0.3 -2,-0.1 0.720 360.0 360.0 57.9 18.6 25.7 10.6 2.0 120 120 A A < 0 0 96 -3,-0.6 -3,-0.5 -4,-0.0 -2,-0.5 -0.433 360.0 360.0-174.0 360.0 26.6 8.8 -1.2