==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 07-JAN-04 1S1N . COMPND 2 MOLECULE: NEPHROCYSTIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.LE MAIRE,T.WEBER,S.SAUNIER,C.ANTIGNAC,A.DUCRUIX,F.DARDEL . 60 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4073.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 30 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 35.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 153 A T 0 0 142 0, 0.0 2,-0.2 0, 0.0 27,-0.0 0.000 360.0 360.0 360.0 57.5 -0.8 -0.3 -4.1 2 154 A G - 0 0 39 26,-0.1 2,-0.3 2,-0.0 28,-0.2 -0.528 360.0 -94.7 112.1 178.7 1.6 2.6 -4.1 3 155 A E E -A 29 0A 128 26,-1.0 26,-2.2 -2,-0.2 2,-0.5 -0.866 38.1-115.4-126.5 161.3 2.0 5.8 -2.0 4 156 A E E +A 28 0A 59 -2,-0.3 54,-1.3 24,-0.2 2,-0.2 -0.886 36.8 159.0-115.1 136.3 0.7 9.2 -3.0 5 157 A Y E -AB 27 57A 35 22,-1.3 22,-2.6 -2,-0.5 2,-0.3 -0.621 35.4-122.7-125.0-179.0 2.6 12.3 -3.8 6 158 A I E -AB 26 56A 30 50,-2.4 50,-2.4 20,-0.3 2,-0.3 -0.928 24.5-116.9-125.2 154.6 1.4 15.2 -5.7 7 159 A A E -AB 25 55A 0 18,-2.3 17,-1.7 -2,-0.3 18,-1.0 -0.714 22.3-172.7 -89.3 150.6 3.1 16.4 -8.8 8 160 A V + 0 0 26 46,-1.7 2,-0.3 -2,-0.3 15,-0.2 -0.138 68.0 65.0-130.1 28.4 4.6 19.9 -8.5 9 161 A G S S- 0 0 19 45,-0.4 2,-0.9 16,-0.1 15,-0.3 -0.954 82.9-121.3-142.2 158.9 5.5 20.1 -12.2 10 162 A D + 0 0 108 -2,-0.3 2,-0.3 12,-0.3 12,-0.2 -0.814 42.9 167.2-107.7 94.3 3.3 20.1 -15.3 11 163 A F B -E 21 0B 71 -2,-0.9 10,-1.0 10,-0.8 2,-0.3 -0.762 16.7-165.3-107.6 154.1 4.4 17.1 -17.4 12 164 A T - 0 0 61 -2,-0.3 2,-0.5 8,-0.2 8,-0.2 -0.843 29.6-104.8-127.0 163.4 2.7 15.6 -20.4 13 165 A A + 0 0 31 -2,-0.3 3,-0.1 5,-0.2 7,-0.1 -0.808 36.3 168.2 -95.3 135.0 3.3 12.2 -22.0 14 166 A Q S S+ 0 0 127 -2,-0.5 2,-0.2 2,-0.1 -1,-0.2 0.621 72.8 32.8-110.7 -29.8 5.2 12.4 -25.3 15 167 A Q S S- 0 0 155 4,-0.1 2,-0.3 1,-0.1 3,-0.2 -0.550 101.7 -83.7-115.6-178.1 5.9 8.7 -25.5 16 168 A V S S+ 0 0 147 -2,-0.2 3,-0.1 1,-0.2 -2,-0.1 -0.645 108.6 44.7 -88.9 150.9 3.9 5.7 -24.3 17 169 A G S S+ 0 0 31 1,-0.4 32,-0.3 -2,-0.3 -1,-0.2 -0.364 94.7 90.6 113.5 -51.9 4.3 4.8 -20.7 18 170 A D - 0 0 33 30,-0.3 -1,-0.4 -3,-0.2 2,-0.2 -0.223 61.4-145.3 -77.0 166.5 4.1 8.3 -19.3 19 171 A L - 0 0 24 30,-0.5 2,-0.5 -7,-0.1 -4,-0.1 -0.639 17.6-112.4-121.3 178.8 1.0 10.3 -18.1 20 172 A T + 0 0 83 -2,-0.2 2,-0.3 -8,-0.2 -8,-0.2 -0.889 44.9 156.1-122.0 100.0 -0.1 13.9 -18.2 21 173 A F B -E 11 0B 7 -10,-1.0 -10,-0.8 -2,-0.5 2,-0.4 -0.757 29.3-124.0-119.2 168.3 -0.3 15.6 -14.8 22 174 A K - 0 0 126 -2,-0.3 3,-0.4 -12,-0.2 2,-0.3 -0.932 36.9 -80.6-124.8 142.8 -0.1 19.2 -13.6 23 175 A K S S+ 0 0 138 -2,-0.4 -15,-0.3 1,-0.2 -13,-0.2 0.005 117.7 10.2 -23.9 77.9 1.9 21.3 -11.2 24 176 A G S S+ 0 0 44 -17,-1.7 2,-0.3 -2,-0.3 -1,-0.2 0.840 91.4 123.8 107.8 50.5 0.2 20.4 -7.9 25 177 A E E -A 7 0A 44 -18,-1.0 -18,-2.3 -3,-0.4 2,-0.5 -0.835 62.2 -96.4-128.0 170.8 -2.2 17.5 -8.4 26 178 A I E +A 6 0A 64 -2,-0.3 -20,-0.3 -20,-0.3 2,-0.3 -0.774 42.2 171.1 -99.8 132.8 -2.3 14.2 -6.6 27 179 A L E -A 5 0A 6 -22,-2.6 -22,-1.3 -2,-0.5 2,-0.3 -0.799 24.9-135.2-124.7 167.8 -0.7 11.0 -8.0 28 180 A L E -AC 4 41A 39 13,-1.9 13,-1.5 -2,-0.3 2,-0.4 -0.824 20.7-138.7-117.5 159.7 0.0 7.5 -6.6 29 181 A V E +AC 3 40A 6 -26,-2.2 -26,-1.0 -2,-0.3 2,-0.3 -0.985 20.6 176.6-128.1 136.7 3.4 5.8 -7.1 30 182 A I + 0 0 46 9,-1.1 9,-0.3 -2,-0.4 2,-0.1 -0.713 58.8 17.6-145.3 86.1 4.1 2.2 -8.0 31 183 A E S S- 0 0 81 -2,-0.3 2,-0.5 7,-0.2 8,-0.2 -0.194 80.9 -94.3 130.6 153.2 7.7 1.1 -8.6 32 184 A K - 0 0 153 6,-0.2 5,-0.1 -2,-0.1 6,-0.1 -0.841 47.9 -84.0-109.8 123.0 11.1 2.7 -7.6 33 185 A K + 0 0 83 -2,-0.5 5,-0.2 3,-0.2 -1,-0.1 0.299 52.3 161.9 -9.8 78.4 13.3 5.0 -9.7 34 186 A P S S- 0 0 90 0, 0.0 -1,-0.2 0, 0.0 4,-0.1 0.961 91.3 -3.3 -69.1 -56.5 15.4 2.6 -11.8 35 187 A D S S- 0 0 113 2,-0.3 -2,-0.1 0, 0.0 3,-0.1 0.069 130.8 -61.1-125.3 19.3 16.3 5.3 -14.3 36 188 A G S S+ 0 0 9 1,-0.3 16,-1.0 14,-0.1 17,-0.4 0.098 108.5 95.2 122.1 -23.8 14.3 8.2 -12.9 37 189 A W E - D 0 51A 88 14,-0.2 -1,-0.3 -5,-0.1 -2,-0.3 -0.755 45.2-170.3-113.4 154.6 10.8 6.9 -13.2 38 190 A W E - D 0 50A 29 12,-2.8 12,-1.5 -2,-0.3 2,-0.9 -0.778 39.1-108.0-122.7 163.9 8.3 5.2 -11.0 39 191 A I E - D 0 49A 48 -9,-0.3 -9,-1.1 -2,-0.3 10,-0.3 -0.833 52.2-179.4-102.9 105.6 5.0 3.7 -12.4 40 192 A A E -CD 29 48A 0 -2,-0.9 8,-1.7 8,-0.8 2,-0.3 -0.241 20.8-143.3 -98.4-177.9 2.3 6.1 -11.0 41 193 A K E -CD 28 47A 61 -13,-1.5 -13,-1.9 6,-0.3 6,-0.2 -0.912 10.2-152.4-137.2 164.5 -1.4 6.5 -11.2 42 194 A D - 0 0 36 4,-1.8 3,-0.1 -2,-0.3 -15,-0.1 -0.470 40.2 -86.6-122.4-163.2 -3.7 9.6 -11.4 43 195 A A S S+ 0 0 103 1,-0.2 -16,-0.1 -2,-0.2 -17,-0.0 -0.192 117.9 64.0-103.4 40.9 -7.3 10.4 -10.3 44 196 A K S S- 0 0 170 2,-0.3 -1,-0.2 0, 0.0 3,-0.1 0.535 114.0-103.1-126.2 -35.6 -8.7 9.0 -13.6 45 197 A G S S+ 0 0 54 1,-0.5 -2,-0.0 -3,-0.1 0, 0.0 -0.165 83.5 108.8 134.9 -39.0 -7.8 5.4 -13.2 46 198 A N - 0 0 52 -5,-0.1 -4,-1.8 1,-0.0 -1,-0.5 -0.146 53.2-145.4 -67.8 163.8 -4.8 5.1 -15.5 47 199 A E E +D 41 0A 97 -6,-0.2 -6,-0.3 -3,-0.1 2,-0.2 -0.955 23.0 163.4-129.5 149.5 -1.2 4.6 -14.5 48 200 A G E -D 40 0A 2 -8,-1.7 -8,-0.8 -2,-0.3 2,-0.6 -0.533 43.9 -74.3-139.3-156.3 1.9 6.0 -16.2 49 201 A L E +D 39 0A 49 -32,-0.3 -30,-0.5 -10,-0.3 -10,-0.2 -0.946 51.5 165.1-117.1 101.9 5.6 6.7 -15.9 50 202 A V E -D 38 0A 0 -12,-1.5 -12,-2.8 -2,-0.6 -14,-0.1 -0.911 31.5-122.8-120.5 151.4 6.2 9.7 -13.7 51 203 A P E -D 37 0A 15 0, 0.0 -14,-0.2 0, 0.0 -1,-0.0 -0.236 7.8-135.6 -82.4 175.9 9.6 10.7 -12.2 52 204 A R S > S+ 0 0 86 -16,-1.0 3,-2.3 1,-0.1 -15,-0.1 0.807 91.9 83.8 -96.4 -42.9 10.2 11.3 -8.5 53 205 A T T 3 S+ 0 0 58 -17,-0.4 -1,-0.1 1,-0.3 -16,-0.1 0.718 101.5 30.7 -23.4 -53.7 12.2 14.4 -9.2 54 206 A Y T 3 S+ 0 0 147 2,-0.0 -46,-1.7 -45,-0.0 2,-0.4 -0.305 100.5 100.6-112.3 49.0 9.0 16.6 -9.3 55 207 A L E < -B 7 0A 0 -3,-2.3 -48,-0.2 -48,-0.2 -3,-0.0 -1.000 49.0-169.4-131.1 129.5 6.9 14.6 -6.9 56 208 A E E -B 6 0A 102 -50,-2.4 -50,-2.4 -2,-0.4 -2,-0.0 -0.956 30.2-105.1-121.0 143.7 6.3 15.7 -3.3 57 209 A P E -B 5 0A 102 0, 0.0 2,-0.3 0, 0.0 -52,-0.2 -0.113 39.3-135.5 -58.9 161.2 4.7 13.5 -0.6 58 210 A Y - 0 0 109 -54,-1.3 2,-0.8 -53,-0.1 -54,-0.1 -0.754 13.4-122.8-121.2 168.9 1.1 14.4 0.5 59 211 A S 0 0 99 -2,-0.3 -54,-0.1 1,-0.2 0, 0.0 -0.685 360.0 360.0-110.8 73.5 -0.9 14.8 3.7 60 212 A E 0 0 168 -2,-0.8 -1,-0.2 -56,-0.2 0, 0.0 0.699 360.0 360.0 -24.2 360.0 -3.6 12.3 2.9