==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 16-JAN-04 1S4G . COMPND 2 MOLECULE: VITRONECTIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.MAYASUNDARI,N.A.WHITTEMORE,E.H.SERPERSU,C.B.PETERSON . 51 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3300.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 27 52.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 2 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 25.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A D 0 0 37 0, 0.0 23,-0.1 0, 0.0 6,-0.1 0.000 360.0 360.0 360.0 -65.1 6.8 -2.0 0.0 2 2 A Q + 0 0 128 21,-0.7 3,-0.1 1,-0.2 22,-0.1 0.937 360.0 39.8 -69.5 -49.3 8.4 -5.5 0.6 3 3 A E S S- 0 0 70 1,-0.3 2,-0.3 3,-0.1 -1,-0.2 0.968 142.5 -21.4 -59.0 -59.6 9.4 -6.0 -3.0 4 4 A S S S- 0 0 78 2,-0.1 2,-2.2 5,-0.0 -1,-0.3 -0.950 83.3 -83.9-150.9 159.4 10.4 -2.4 -3.5 5 5 A a S S+ 0 0 64 -2,-0.3 7,-0.8 -3,-0.1 2,-0.3 -0.424 86.2 114.9 -74.1 76.9 9.6 0.9 -1.6 6 6 A K > + 0 0 33 -2,-2.2 3,-0.9 5,-0.1 2,-0.9 -0.863 53.2 26.4-139.1 169.3 6.3 1.6 -3.4 7 7 A G T 3 S+ 0 0 0 1,-0.3 12,-0.2 -2,-0.3 6,-0.1 -0.686 133.0 18.3 76.1-106.0 2.6 1.8 -2.7 8 8 A R T 3 S+ 0 0 94 -2,-0.9 2,-0.7 10,-0.5 -1,-0.3 0.941 119.9 72.7 -64.5 -44.8 2.4 2.7 1.1 9 9 A a < - 0 0 12 -3,-0.9 -2,-0.1 1,-0.2 -1,-0.1 -0.618 66.6-176.1 -64.0 110.0 6.0 3.8 0.8 10 10 A T > + 0 0 61 -2,-0.7 3,-1.6 -4,-0.2 -1,-0.2 0.824 67.8 73.9 -73.8 -37.1 5.6 7.1 -1.2 11 11 A E T 3 S+ 0 0 154 1,-0.3 -1,-0.1 -3,-0.1 -5,-0.1 0.841 94.1 45.2 -53.6 -52.7 9.3 7.7 -1.4 12 12 A G T 3 S+ 0 0 54 -7,-0.8 -1,-0.3 2,-0.0 2,-0.2 0.074 119.5 26.0 -92.1 25.2 10.4 5.1 -4.0 13 13 A F S < S- 0 0 41 -3,-1.6 2,-0.3 -6,-0.1 3,-0.1 -0.886 72.6-116.8-157.3-167.4 7.6 5.7 -6.5 14 14 A N S S+ 0 0 139 -2,-0.2 3,-0.2 1,-0.2 -7,-0.1 -0.947 78.9 49.1-142.0 157.9 5.1 8.3 -7.8 15 15 A V S S- 0 0 101 -2,-0.3 2,-2.5 1,-0.1 -1,-0.2 0.961 80.6-132.0 66.8 86.5 1.3 8.6 -7.9 16 16 A D + 0 0 76 -3,-0.1 2,-0.8 -10,-0.1 -1,-0.1 -0.338 51.2 148.3 -78.7 62.5 0.6 7.7 -4.2 17 17 A K - 0 0 84 -2,-2.5 21,-0.2 -3,-0.2 -10,-0.1 -0.884 40.0-151.5 -88.3 108.4 -2.1 5.1 -4.6 18 18 A K S S+ 0 0 69 -2,-0.8 2,-0.7 1,-0.1 -10,-0.5 0.744 88.2 58.9 -72.7 -21.9 -1.1 3.1 -1.5 19 19 A b + 0 0 1 18,-2.6 -1,-0.1 -12,-0.2 -12,-0.1 -0.950 63.1 148.6 -88.5 111.7 -2.5 -0.1 -3.1 20 20 A Q S S- 0 0 75 -2,-0.7 13,-0.3 -14,-0.1 -1,-0.2 0.751 74.0 -73.5-102.5 -57.3 -0.4 -0.2 -6.2 21 21 A c S S+ 0 0 37 -3,-0.2 11,-1.2 11,-0.1 10,-0.5 0.083 110.8 23.6-160.8 -63.6 -0.2 -4.0 -6.6 22 22 A D > + 0 0 54 9,-0.1 2,-2.2 1,-0.1 4,-1.9 0.879 67.3 117.3 -84.1-102.1 2.0 -5.8 -4.2 23 23 A E T 4 S- 0 0 0 1,-0.2 -21,-0.7 -19,-0.2 -1,-0.1 -0.420 101.5 -63.7 75.8 -69.0 2.8 -4.1 -0.8 24 24 A L T >> S+ 0 0 71 -2,-2.2 4,-2.5 -3,-0.2 3,-1.9 -0.024 127.7 79.5 178.8 -46.5 1.2 -6.7 1.6 25 25 A d T 34 S+ 0 0 4 1,-0.3 -2,-0.2 2,-0.2 -3,-0.1 0.773 82.1 70.8 -53.6 -32.2 -2.5 -6.4 0.6 26 26 A S T 3< S+ 0 0 27 -4,-1.9 -1,-0.3 4,-0.3 3,-0.1 0.861 112.6 28.8 -47.2 -43.0 -1.6 -8.7 -2.4 27 27 A Y T <4 S+ 0 0 136 -3,-1.9 2,-1.8 1,-0.2 -2,-0.2 0.867 111.5 67.9 -88.6 -46.0 -1.1 -11.5 0.1 28 28 A Y S < S- 0 0 100 -4,-2.5 2,-0.7 20,-0.1 -1,-0.2 -0.595 140.3 -56.4 -77.6 81.0 -3.6 -10.2 2.7 29 29 A Q S S- 0 0 5 -2,-1.8 2,-0.3 -3,-0.1 19,-0.1 -0.763 101.4 -59.3 75.0-108.6 -6.6 -10.9 0.4 30 30 A S + 0 0 26 -2,-0.7 -4,-0.3 1,-0.1 -3,-0.1 -0.942 41.6 176.0-159.2 149.2 -5.5 -8.8 -2.7 31 31 A b >> + 0 0 0 -10,-0.5 3,-2.6 -2,-0.3 4,-1.4 0.642 65.4 91.8-107.1 -52.1 -4.7 -5.2 -3.6 32 32 A c T 34 S- 0 0 50 -11,-1.2 -11,-0.1 1,-0.3 4,-0.1 -0.284 119.3 -19.6 -57.3 111.4 -3.7 -5.8 -7.3 33 33 A T T 34 S+ 0 0 150 2,-0.3 -1,-0.3 -13,-0.3 3,-0.1 0.825 136.0 72.6 50.6 41.9 -6.9 -5.2 -9.3 34 34 A D T <4 S+ 0 0 33 -3,-2.6 2,-0.3 1,-0.7 -2,-0.2 0.424 92.8 41.9-139.9 -58.8 -9.0 -5.8 -6.1 35 35 A Y S < S- 0 0 5 -4,-1.4 -1,-0.7 1,-0.2 -2,-0.3 -0.757 73.5-153.3 -91.3 144.8 -8.5 -2.7 -3.9 36 36 A T - 0 0 97 -2,-0.3 -1,-0.2 -3,-0.1 -3,-0.1 0.971 70.0 -4.3 -83.0 -79.8 -8.6 0.6 -5.8 37 37 A A S S+ 0 0 46 1,-0.1 -18,-2.6 -19,-0.1 2,-0.2 0.972 120.2 32.1 -87.1 -67.0 -6.7 3.4 -4.1 38 38 A E S S- 0 0 63 -20,-0.3 2,-1.3 -21,-0.2 -1,-0.1 -0.639 79.4-107.5-104.8 154.1 -5.2 2.4 -0.7 39 39 A d S S+ 0 0 25 -2,-0.2 -8,-0.1 -4,-0.1 -1,-0.0 -0.676 80.8 103.1 -78.6 91.7 -3.9 -0.9 0.7 40 40 A K S S- 0 0 98 -2,-1.3 2,-0.1 -15,-0.0 -2,-0.1 -0.908 85.3 -76.4-165.7 144.0 -6.9 -1.6 3.1 41 41 A P + 0 0 31 0, 0.0 3,-0.1 0, 0.0 -10,-0.1 -0.321 58.5 150.2 -43.2 112.7 -9.9 -3.9 3.1 42 42 A Q + 0 0 69 1,-0.5 2,-0.3 -2,-0.1 -7,-0.1 0.676 68.3 28.0-107.4 -63.3 -12.4 -2.4 0.7 43 43 A V - 0 0 72 1,-0.1 -1,-0.5 -9,-0.1 3,-0.1 -0.740 66.1-147.3 -99.8 147.9 -14.2 -5.5 -0.6 44 44 A T + 0 0 40 -2,-0.3 2,-2.3 1,-0.2 5,-0.3 0.901 24.6 175.1 -76.7 -45.8 -14.6 -8.7 1.4 45 45 A R - 0 0 120 1,-0.2 -1,-0.2 3,-0.1 3,-0.1 -0.474 58.0 -89.9 67.4 -68.3 -14.5 -11.0 -1.6 46 46 A G S S+ 0 0 35 -2,-2.3 -1,-0.2 1,-0.6 2,-0.1 -0.186 98.0 83.7 167.4 -54.1 -14.6 -14.1 0.6 47 47 A D S S- 0 0 68 2,-0.1 2,-1.6 3,-0.1 -1,-0.6 -0.392 101.2 -12.1 -76.2 150.5 -11.0 -15.1 1.5 48 48 A V S S+ 0 0 80 1,-0.2 2,-1.9 -2,-0.1 -1,-0.1 -0.426 133.1 50.2 66.6 -81.7 -8.9 -13.7 4.3 49 49 A F S S- 0 0 94 -2,-1.6 -1,-0.2 -5,-0.3 2,-0.1 -0.487 87.3-176.1 -84.0 65.5 -11.1 -10.6 5.2 50 50 A T 0 0 102 -2,-1.9 -3,-0.1 1,-0.1 -5,-0.1 -0.417 360.0 360.0 -68.2 138.0 -14.2 -12.8 5.5 51 51 A M 0 0 191 -2,-0.1 -1,-0.1 -5,-0.1 -2,-0.1 -0.431 360.0 360.0 -75.3 360.0 -17.5 -11.0 6.1