==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOME 16-JAN-04 1S4J . COMPND 2 MOLECULE: 60S ACIDIC RIBOSOMAL PROTEIN P2; . SOURCE 2 SYNTHETIC: YES; . AUTHOR M.R.SOARES,P.M.BISCH,A.C.CAMPOS DE CARVALHO,A.P.VALENTE, . 13 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1403.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 3 23.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E 0 0 229 0, 0.0 7,-0.1 0, 0.0 8,-0.0 0.000 360.0 360.0 360.0 130.4 -6.8 0.2 3.9 2 2 A E + 0 0 93 0, 0.0 6,-0.3 0, 0.0 8,-0.1 0.594 360.0 168.5-126.0 -68.1 -5.4 1.5 0.5 3 3 A S + 0 0 80 4,-2.0 5,-0.2 6,-0.2 7,-0.1 0.541 41.9 123.2 55.5 10.8 -4.3 -1.4 -1.8 4 4 A D S S+ 0 0 108 3,-0.3 -1,-0.2 5,-0.2 4,-0.1 0.473 91.4 16.8 -75.9 -1.2 -4.1 1.3 -4.6 5 5 A D S S- 0 0 70 2,-0.5 3,-0.1 4,-0.1 5,-0.1 0.536 138.6 -52.8-129.1 -69.0 -0.5 0.0 -4.8 6 6 A D S S- 0 0 62 1,-0.6 2,-0.2 3,-0.1 7,-0.1 0.382 111.7 -1.5-146.2 -48.3 0.0 -3.4 -3.1 7 7 A M S S- 0 0 111 5,-0.1 -4,-2.0 -6,-0.0 -1,-0.6 -0.630 95.7 -68.4-135.3-167.8 -1.3 -3.1 0.4 8 8 A G S S+ 0 0 32 -6,-0.3 2,-0.0 -2,-0.2 0, 0.0 0.302 107.3 94.4 -73.7 11.5 -2.9 -0.5 2.7 9 9 A F S S- 0 0 105 3,-0.1 2,-0.6 -8,-0.0 -5,-0.2 -0.057 90.3 -94.0 -88.0-169.1 0.5 1.2 2.7 10 10 A G S S- 0 0 32 1,-0.1 -2,-0.1 -5,-0.1 -1,-0.0 -0.800 86.6 -45.1-119.7 90.6 1.8 4.0 0.4 11 11 A L S S+ 0 0 138 -2,-0.6 -1,-0.1 -4,-0.2 2,-0.1 0.764 94.7 157.0 59.5 31.1 3.6 2.6 -2.7 12 12 A F 0 0 123 -5,-0.1 -1,-0.2 1,-0.0 -5,-0.1 -0.301 360.0 360.0 -81.1 167.1 5.5 0.1 -0.5 13 13 A D 0 0 220 -7,-0.1 -7,-0.0 -2,-0.1 -1,-0.0 -0.972 360.0 360.0-118.8 360.0 7.1 -3.2 -1.6